Cyprinus carpio (common carp): 109084885
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Entry
109084885 CDS
T05134
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109084885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109084885
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109084885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
109084885
NCBI-ProteinID:
XP_042607985
Ensembl:
ENSCCRG00000018552
UniProt:
A0A8C2L1J0
LinkDB
All DBs
Position
A5:5738943..5772175
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AA seq
350 aa
AA seq
DB search
MDTEGSQSSLSSSTQDSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTK
RSRGFGFVTYVDQTGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSV
NTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMSPTGTARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYASRGYTGITPG
YTYQFPEFHLERTPLLTSSHPQEITAIPLTAYGPMAAAAAAAMVRGSTHSRTAGFLGTSS
PGPMADLYAAANQDSGVSSYISAASPAPSTGFGHGLGGPLIATAFTNGYH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaagggagtcagagcagcctgtcgtcctccacgcaggactccccacacgac
ccctgcaaaatgttcatcggcgggttgagctggcagacgacacaagaagggctaaaggaa
tacttttgtaaattcggcgaggtgaaggagtgtatggtgatgcgggatccggttacaaag
cggtcgagggggtttggatttgtcacctatgtagaccagaccggtgtggataaagttttg
gcccaaaacagacacgagctggattcaaaaacaattgaccctaaggtggccttcccacgc
agagctcagccgaagctggtaacaagaaccaagaagatctttgttggaggattgtctgtc
aacaccaccatcgaagatgtgaaacagtatttcgatcaatttggaaaggttgatgacgcg
atgctaatgtttgacaaaaccaccaacaggcaccgaggttttggctttgtgacctttgag
aatgaagacgtggtggaaaaggtctgcgagatccactttcacgagatcaacaacaagatg
gtggagtgcaaaaaggcgcagccgaaggaagtgatgtcaccgacaggtacggcacgaggc
cgctccagggtgatgccctacggcatggacgccttcatgctgggaatcggcatgctgggt
tacccagggttccagacagccacttacgccagtcgtggctacacaggaatcacaccgggg
tacacataccagttcccagaattccatttagaacggacaccccttctgacttcctctcac
ccccaagagatcacagccattccactgacggcctacggaccaatggcagcggccgcagct
gcagcgatggtcagaggttccacccactcacgtaccgccggcttcctgggcaccagcagc
cctgggccaatggcagacctgtatgcagcggccaatcaggattcaggagtcagcagctat
atcagtgcggcaagtcccgcccccagcacagggtttggacacggactcgggggtcctttg
attgcaacggcctttaccaatggctaccactga
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