Cyprinus carpio (common carp): 109085132
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Entry
109085132 CDS
T05134
Name
(RefSeq) whirlin-like isoform X1
KO
K21879
whirlin
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109085132
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109085132
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
HHD_RTEL1
DUF6288
PAH_ZNF598
C2H2_ASCIZ
Motif
Other DBs
NCBI-GeneID:
109085132
NCBI-ProteinID:
XP_042634750
Ensembl:
ENSCCRG00000028926
UniProt:
A0A9Q9ZAW7
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All DBs
Position
A21:complement(7437218..7504106)
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AA seq
950 aa
AA seq
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MSTDLERLSLTSSSGNSVASSARSLSANVKKLHNALNLLLSDLEREQFIHCLNVYHSKRN
VYDLVQTLKVILNVPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYMKSDVLARNGDPDGS
HEASNSSPTHGAHFSAPSASQAALRGSPDNISTSSDGTATLVPLLGRNFLPEPPGEIRQV
ILKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDRVTH
AEAVKVLKGSKKLSMSVRSVGRIPGGYVTNHVYTWVNPQGHSVSPPPDLLVEHRSATLRR
SNSQGRSHMQLLQDGDEKKVNLVLDDGRSLGLMIRGGAEYSLGIYITGVDRGSAAECGGL
KVGDQILEVNGRSFLSIPHDEAVRVLKSSHHLMMTVKDVGRLPHARTVVGETKWITSSQI
TDSSPSSSVTGLSLDQGASASGKGGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTEPE
RQTMGYYIQEYRDGHIGVEQLVMALFELFNTHAKFSLLSEVRGLVAPQDVERFDGLVLRR
EIEALKARQGGGAGFQDSFSMVSYPDTLASSSASFMTNTTLSSARERLLWLIDMMENDGV
AENNGEQSLEHSNALPDISLDEVHSTSDSPPSFKPPPPPGLQRRPGRKATLSKRPSSSSS
QSGLYFTAPSHSQSKEPKHPKAPKPRTSPLDTLKIDVPAPQLSVVSQHTFGPFPRVQSPS
KVKPAAVQSSSPIPPPAPNVPAPPGPPPPPPLPPCPDKPAPSSPASNQHFVMVEVHRPNA
EPDVNEVRPLLQARGGTLSQLSDSGQTLSEDSGVDIAESGRLSKDSSPRPARTRAPRDGH
GGGETSAKPPGLLEPTSTLVRVAKSTSTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQ
LKVGQVILEVNGVSLRGKEHREAARLIAEAFKTKEKDYIDFLITEFNVAL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacctggagcgcctgtcgctgacctcttcctcgggaaactctgtggcgtct
agcgcgcgttccctttccgccaacgtgaagaagcttcacaacgcgctcaacctgctgctc
agcgacctcgagagagagcagttcatccactgcctcaacgtgtaccactccaagcgcaat
gtgtacgatctggtccagacgcttaaagtcatactaaacgtcccgagcaagcgtcagctt
ctgcccatgctgcggctggttatcccgcgctcggatcagcttttgttcgatcaatacaca
tcagaggggctgtacatgaaatccgatgttcttgcgcgcaatggtgacccagacggctcc
cacgaggcttctaattcgagtccaacacacggggctcacttctcggctccttccgcgtct
caagccgctctgcgcgggtctcctgataacatcagcaccagcagcgatgggacagcgact
cttgttccgttactgggaagaaatttcttaccggagccgccaggagagatccggcaggtg
atcctcaagcgtcacaagagcaacgagggtttgggatttagtatccgtggaggatccgag
catggtgttgggatctatgtgtcactggtggaaccgggatcactggctgaaaaggagggt
ttaagaataggagatcagataatgaaagttaatgacaaagtgttcgaccgggtcacgcac
gcagaggcagttaaggtgctgaagggcagcaaaaagctctccatgtcagtgcgttctgtg
ggccgtatcccgggtggttatgtcacaaatcatgtctacacctgggtgaatccgcaggga
cacagcgtgtccccaccccctgacctgctggtggagcatcgaagcgctaccctgcgcagg
tccaacagtcagggccgcagccacatgcagcttctgcaggacggcgatgagaagaaggta
aatttggttctggatgacggccgttctttgggtctcatgatccgtggaggggctgaatac
tctttaggtatctatatcacaggtgtggacagagggtctgcagcagagtgtggaggactg
aaggttggggatcagattctggaggttaatggacgaagtttcctcagcatcccacacgat
gaggctgtacgagtgctgaagtcttcacaccacctgatgatgacggtgaaggatgtcggg
cgactgccacatgcccgcaccgtagtgggcgagacaaagtggatcacaagctcacagatt
acagacagctcgcccagcagcagtgtcacaggactctctctggaccagggagcatcagca
tcaggaaagggtggcttttataaaggtgtggcaggatctcaggtgactctgtccagtttg
gtgaaccagagcagggccatgctggaggagcaggccagacatctgctgaccgaaccggag
aggcagaccatgggttactacatccaagagtaccgtgatggtcacatcggtgttgagcag
ctggtcatggccctctttgagctgttcaatacacatgccaagttctctctgctgtcagag
gtgagggggctcgtggcccctcaggatgtggagagatttgacggcctggttctgagaaga
gagatcgaggccctgaaggcgagacaaggtggcggagctgggtttcaagactccttctcc
atggtttcttaccctgacacactggcctcctcctcagccagcttcatgaccaacaccacc
ctcagctccgcacgggaaagactcctctggctgatagatatgatggagaacgatggtgtc
gcagagaacaatggggaacagtctctcgagcatagcaatgccctgccagacatctctctg
gatgaggttcattccacctcagattcccctccttcctttaaacctcctcctcccccaggg
cttcagcgccggcccggtcgaaaagccacgcttagcaaacgtccctcttctagctcctcc
caatcgggcttgtacttcaccgccccttctcattcccagagcaaagaacccaaacaccca
aaagcacccaaacctcgcacatctcctcttgacaccctcaagatagatgtcccagcacct
caactctcagtcgtgagccagcatactttcggaccgttcccccgggtccagtctcctagt
aaggtgaagcctgctgctgtccaatcctcatctccgattcctccacccgcccctaatgta
cctgcgccacctgggccgccgcctcctcctccactgcccccctgcccagataagcccgcc
ccttcttccccagcatccaatcagcattttgtcatggtggaggtgcacaggcccaacgca
gagcctgatgtgaacgaggtgcggccgctgctacaagctcgaggagggacattatcccag
ctgtcagacagcggacagaccctcagcgaggacagcggtgtggacattgccgaatctgga
cgtctcagtaaggatagcagcccacgtcccgcccgcaccagagccccacgggatgggcac
ggaggaggagaaacatctgccaaaccgccgggtctgttggagcctacgtccactctagtg
agagtggcaaaaagcaccagtactctgggcatcgcaatagaaggtggggcaaacacacgc
cagcccctgccacgcatcgttaccatacagagaggtggttcggctcataactgtggacag
ctgaaggtgggtcaggtgatccttgaagtgaatggagtgtctctcagaggaaaggaacat
cgggaagccgcacgtctcatcgcagaggcctttaaaaccaaagagaaggactacattgac
ttcttgatcacagagtttaatgttgctctataa
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