Cyprinus carpio (common carp): 109085858
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Entry
109085858 CDS
T05134
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109085858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109085858
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
ROBO family
109085858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
VID27_N
Motif
Other DBs
NCBI-GeneID:
109085858
NCBI-ProteinID:
XP_042612821
Ensembl:
ENSCCRG00000048198
UniProt:
A0A9Q9Y4I0
LinkDB
All DBs
Position
A5:complement(31354253..31495798)
Genome browser
AA seq
1646 aa
AA seq
DB search
MTGRVIGFVLFIAVIHVCTGSRLRQEDYAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPT
VEWYKDGERVETDRDNPRSYRMLLPSGSLFFLRIIHGRRSKPDEGSYVCVARNYLGEAVS
HNASLEVAILRDDFRQNPVDVMVAAGEPAVMECQPPRGHPEPTISWKKDGVTIDDRDERI
TIRGGKLMITNTRKTDAGKYVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQS
VEFRCEAQGDPVPTIRWRKEDGDLPKGRHEIWEDHTLKLKRLTSGDAGSYTCQAENMMGK
TEASATLTVHVVSVPPVFVVRPRNQVVGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFS
SQPPPPSSRFSVSQTGDLTITAVERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPP
IVRQGPTNQTVAVDGTVVLGCQATGTPTPTILWRKDGVLVSTHDSRLKQLDTGALQIRYA
KLGDTGMYTCTASTPSGEASWKAYLEVQEFGAPVQPGRPTDPNLIPSAPFKPEVTDVSRT
SVSLSWKPNLNAGATPTSYVIEAFSHAAGSSWQTLADHVKTESFVLKGLKPSAIYLFLVR
AANAYGLSDPSPISDAVKTQDVPPTNQGVDHGQIQRELGDVVIHLHNPTILSSSSVRVQW
TVEQQSQYIQGYKVMYRPSPEGTQQRVEWAMFEVRTLGENSAVITQLKKGVTYEFKVRPF
FNEFQGTDSDIKVGKTLEEAPSAAPRGVTVTGSGDNGTAILVSWQPPPEEEQNGVVQEYK
IWCLGNESRYHINRTVDGSTHSVLIPGLLAGVTYRVEVAASTGAGPGVKSEATSFQLDSS
GRVLPPPPDDDDTFSQQISDVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSY
VGIRKVPSFTFTPTVAYQRGGEAVSSAGRPGLLNIGEPATQPWLADTWPNSCSNHNDCPI
NCCTGSNGNSDSNLATYSRPADCIANYSNQMDNKASNLLAPDTGLYSDVDLSNKINEMKT
FNSPNLKDGRFVGPGGQPTPYATTQLIQSSLANNNVNSSSGGSADLNEKQSWKSSQGTPQ
KQADINTPLQYNVMEQNKLNKDHYRGEGPISGTIPYNQTQDGLTAGTYSSSDRGSNTSGS
QGQKKGGRTTKQAKHNTMNWTELLPPTPVNLPPCQEYTLVMDDSYDTDLQCPLPPSRMYL
QPDELEEEEEEVELERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDNPDL
HERRRLLVSPPPPPRPLSPPHTYGYISSPLGLDTDGLVEEEDEEEGDETDAEVARVHQLH
THPHQQHLPQQRALLRGLEQTPASSTCDLESSVTGSMINGWGSASEEDNASSGRSSAVSS
SDGSFFTDADFAQAVAAAAEYAGLRVAKHPGKGHHQLPVSGAARKYQNLPVGHRPGSPVS
TDSNVSTAPGQRRPLKRQKQHPAAQTGYQRREAYTEDLPPPPIPPPAMLKSPTHPAKTIP
EGPRGAMSPRSSSADGKDKRTGSGGPRPRDGSDTRTSSSERREGQDVHKSQRTAKSNKQD
AGASHKSRQQPGSEDILPYSRPSFPAVHSPRGERDPSSSSSLSSRGSGGRRRGEGAPGTR
RNPADFGLNTIGAFQTGGEELEMMES
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagagttattggattcgtgctttttatcgcagttatacacgtttgcacaggg
tcccgtctgcggcaggaagactatgcaccccgcattgtggaacacccctctgatctgatc
gtatccaagggcgaaccagccaccctaaactgcaaggcggaggggcggcccacccctact
gtggagtggtacaaggatggagagcgtgtggaaacggaccgggacaaccctcgatcctac
cgcatgctgctgcccagcggctcgctcttcttcctgcgtatcatacacggccgtcgcagc
aaacccgacgaaggctcctacgtttgcgtggcccgtaactacctgggagaagcagttagc
cacaacgcctcgctggaagtagctattcttcgagatgatttcagacagaaccctgtggac
gtgatggtggcggcgggcgagccagcggtcatggagtgccagccgccccggggacaccct
gaacccaccatctcctggaagaaagatggagttaccatagacgacagagatgagaggata
acgatacggggaggaaaactgatgattaccaacaccagaaaaacagatgcaggaaagtac
gtgtgtgtgggaaccaacatgatgggggaacgggagagcgagatcgcagagttgaccgtt
cttgagaggcccagttttttgcgaaagccgagcagtcagtctgttctggtggaccagagt
gtggagttcagatgtgaagctcaaggagaccccgtgcccaccatccgctggaggaaagag
gacggagatcttcccaagggaaggcatgagatctgggaggaccacacgctcaaactgaag
agactgacttcaggagacgccggttcttacacctgtcaggcggagaacatgatggggaag
acggaggccagcgccaccctcaccgtccacgttgtgtctgttcctccggtgtttgtggtg
cgacccaggaatcaagtggtcggtatgggtcgcaccgtgacctttcaatgtgaagccaca
ggaagtcctcagcctgccatattttggcagaaagaaggcagtcagaaccttctgttctct
tctcaacctcctcctccttccagtcggttctctgtctctcagacgggcgatctgaccatc
acagcggtggagcgttcagacggaggctactacagctgtcaggctctgaacatcgctggc
agtgtgatcaccaaagccctgctggaggttacagacgtgatctcagacagacctccaccg
atcgtccggcagggtcccaccaaccagaccgtggctgtggacgggacggtggtcctggga
tgccaagccaccggcacgccgactcccaccatcctgtggaggaaagacggtgtcctggtg
tccacccacgactctcgcctcaaacagctggacacaggagccctgcagatccgttacgca
aagctgggagacactggcatgtacacctgcaccgcgtccacccccagcggagaggcgtcc
tggaaagcttacctggaggtgcaagagtttggtgctccggttcagccgggccgacccaca
gatcccaacctcatccccagcgcccccttcaaaccagaggtcacggatgtcagccgcacc
tctgtgtctctgtcctggaagcccaacctgaacgctggagccacgcccacctcctacgtc
atagaagccttcagccatgcggcgggcagcagctggcagacgcttgcggatcacgtgaag
acggagagcttcgtcctaaagggtctgaagcccagcgccatctacctgttcctggtgaga
gcggctaatgcgtacggcctgagtgacccgagccccatcagcgacgctgtcaaaacacaa
gacgtcccaccaaccaatcagggagtggaccacgggcagatccagagggagctgggagat
gttgtcattcacctccacaatcccacaattctctcttcatcatctgtcagagtacagtgg
actgtcgagcagcagtctcagtacattcagggctataaggtgatgtaccggccgtcccca
gagggcactcagcagcgggtggaatgggccatgtttgaggttcgaaccctgggggagaat
agcgcagtcatcacccagctcaagaagggcgtgacctatgagttcaaagtccgacctttc
ttcaacgagttccaaggcactgacagcgacatcaaagtgggcaagaccctggaggaagca
cccagcgccgctcccaggggggtcactgtaacaggaagcggagacaacggcacagctatt
ctggtatcctggcaaccgcccccagaggaggagcagaacggtgtggtgcaggagtataag
atctggtgtcttggtaatgaaagccgataccacattaaccgcaccgtggatggatccaca
cactcggttctgattcccggccttctcgcgggggtcacgtacagggtggaggtggcagcc
agcacaggggccggtcccggggtgaagagcgaggctacgtccttccagctggactcgtcg
ggccgtgttcttccgccgcccccggacgatgacgatacgttttcccagcagatctcagac
gtggtgcgtcagccggccttcatcgcgggcatcggcgcggcctgctggatcatcctcatg
gtcttcagcatctggctgtaccgccaccgcaagaagaggaacggcctcagcagcagctac
gtcggcatccgcaaagtgccctccttcaccttcacccccacagtggcctatcagagagga
ggagaagccgtcagcagtgctggaaggccaggtttgttgaatataggtgaaccagctacc
cagccctggctcgcggacacatggccgaacagctgctccaatcacaatgactgccccatc
aactgctgcaccggcagcaacggaaacagtgacagcaacctggccacctacagccgccca
gctgactgcattgccaactacagcaaccagatggacaacaaggccagcaacctgctggct
cccgacacgggcctctacagcgacgtggacctctccaacaagatcaacgagatgaagacc
ttcaacagccccaacctgaaggacggccgtttcgtggggcccggcggtcagcctacgccc
tacgccaccacccagctcatccagtccagcctggccaacaacaacgtgaacagcagcagt
ggaggaagtgccgaccttaacgagaagcagagctggaagagcagccagggaacacctcaa
aaacaggctgacatcaacacgccactgcagtataacgtcatggaacagaacaagctgaat
aaggaccactatcgaggtgaggggcccatctcaggcaccatcccctataaccagacccag
gacggcctcacagcaggaacctacagcagctccgacagggggagcaacacctctggaagt
caaggacagaaaaaaggtgggcgaacaactaaacaggccaaacacaacacaatgaactgg
accgaactgttgcctcctactccggttaatctaccaccgtgtcaggaatacacccttgtg
atggacgacagttatgacacagacctgcagtgccctttgccgccgtctcgtatgtatttg
caacctgatgagctagaagaggaggaagaagaggtggagttggagcgtggacctacgcct
cctatacgaggagctgcttcctcacctgctgctgtgtcctacagtcaccagtccaccgcg
accctcaccccgtcccctcaggaggagatgcagcccatgctgcaggataaccctgactta
cacgagcgcaggcgactcttggtgagcccaccccctccaccacgccccctctcccctcca
cacacgtacggctacatatccagccccctgggactggacacggacggcctggtggaagag
gaggacgaggaagagggtgacgagacagatgcggaggtggctcgagtccaccagctccac
acccaccctcaccagcagcacttgccccagcagagggctctcctgcggggcctggaacag
accccggcctccagcacctgtgacctggagagctctgtcaccgggtctatgatcaacggc
tggggctcggcttcagaggaggacaacgcctcatcaggtcgttccagcgccgtcagctca
tcggacggatctttctttaccgatgctgatttcgcccaggctgtagcagctgcagccgaa
tatgctggtttacgagtggcaaagcatcctgggaaaggccaccatcagcttccagtgtct
ggagcagcacggaaataccaaaacctccctgtgggacaccgtccaggcagcccagtgtcc
acagacagtaacgttagcacagccccgggtcagaggaggcctctaaagaggcaaaaacaa
catccagctgctcagacaggctatcagcgccgagaggcctacacagaggatcttccccct
cctcccattcctcctccagccatgctgaagtctccaacacacccggccaaaaccatccca
gagggcccacggggggccatgtcccccagatccagttctgctgatggcaaggacaagcga
acgggttcgggcggacccagaccccgggatggctctgacactcggaccagctcttcagaa
cggcgtgagggccaggatgtacacaagagtcagagaacagcgaaaagcaacaaacaagat
gccggtgcaagccataagagccgccagcagccaggctcagaggacatcctaccttatagt
cgtccatctttcccggccgtccacagtcctcgtggagaaagggaccccagctcctccagt
tcactgtcctctcgaggatccggtggacggcggagaggtgaaggggctccggggacccgc
agaaaccctgcagattttgggctgaacaccataggagccttccagacaggaggggaggag
cttgagatgatggagagctga
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integrated database retrieval system
