Cyprinus carpio (common carp): 109086031
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Entry
109086031 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: ryanodine receptor 3-like
KO
K04963
ryanodine receptor 3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04020
Calcium signaling pathway
ccar04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109086031
04020 Calcium signaling pathway
109086031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109086031
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Ryanodine receptor
109086031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RR_TM4-6
RyR
RYDR_ITPR
RIH_assoc
Ion_trans
RYDR_Jsol
EF-hand_7
EF-hand_8
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
109086031
NCBI-ProteinID:
XP_042581136
UniProt:
A0A9R0A247
LinkDB
All DBs
Position
B6:complement(763713..832560)
Genome browser
AA seq
2899 aa
AA seq
DB search
MRPPSGSLDSLTGKLKLRLNKIWTEGAVRYQWENAVDVLHLQSLGRGFQWRSEEEDQDFM
SIKACLLAPHVYKIKANLKELISQTMVSWAQETHIQDPELVRLMFSLLRRQYDSIGELLR
AMRKTYTISAASVHDTIHLLAHHPHIRPILSIPNEEEQLTTQSLRDIMNNKVFYQHPNLM
RVLGMHETVMEVMVNVLGGENVSASPSMRGSTPLDVAASSVMDNTFGPVWLHHEATVVTY
LAGCGLQSCPMLLAKGYPDISWNPIEGERYLSFLRFAVFVNGESVEENXSVVVKLLIRRP
ECFGPALRGEGGNGLLAAMKEAIKISEKPQPGSAQHRATGSPPLRARRKRKWFHEWGTPF
LSFYSALIDLLGRCAPEMHLSQXGGKGEALRIRAILRSPLVPTEDLVGIISIPLKMPCHG
SVSEPDMSCHFLPSDHKAPMVLFLERVYGIEDQSFLLHLLEVGFLPDLRAAASLDTEALR
TTETALAMNRYIGSAVLPLLTRCAPHFSGTEHHAALIDSTLYTVYRLSKGCSLTKAQRDA
IEGCLCVVFRYLRPSMLQHLLRRLVFDVPLLSEYCKMPLKLLTNHYEQNWKYYCLPSGWG
SYGQASEEELLLTKKIFWGIFDSLSQKKYEQDLFKMAMPCLSAIAGALPPDYIDSTLSTT
LEKQVSVDTQGNFDPRPVNTANICLPEKLEYIANKYAEHSHEKWAAEKVLLGWKHGENID
EKAKTHPMLRSYKSLTEKEKEMYCWTVRESLKSMLALGWSIDRTREEESVFQQRDISDNA
EHIHRRDEAFVIVCFQGNGFNPNPLDMSSVLLSRELQSMVEIVAENYHNIWAKKKKSDLC
SRAAGGAHPLLVPYDTLTAKEKTRDRERAQDLFRFLQINGYAISRRLKHMEQDSSSMEKR
FAYRFLKKLLKYVDSAQEFIAHLEAMATSGKNDRSPHEQEIKFFAKVLLPLIDQYFKNHS
LYFLSSPTKNLSSSGYASNKEKEMVTSLFCKLATLVRHRISLFGSDSTTIVSCLHILAHT
LDTRTVMKTGSELVKAGLRTFFESAAEDLEKTLENLKLGKFTHSRSQMKGVSQNINYTTV
ALLPILTALFEHITEHQFGSDLLLDDVQVSCYRILTSLYSLGTGKNIYVERQLPALGECL
ATLAGAMPVAFLEPQLNTHNPCSVFNTKTSRERALVGLPESVEDVCPEMPRLDGLMKDIN
DMSESGARYTEMPHVIEVVLPMLCNYLSYWPARGRLQPPXDEALCSSTVTSEHLSLILGN
ILKILNSNLGIDEASWMKRIAVYAQPIISKARADLLKTHFLPTLEKLKKKTVKVVSEEEL
LKADGKGDTQEAELLILDEFAVLCRDLYAFYPMLIRYVDNNRSRWLKEPDADSNELFRMV
AEIFILWCKSHNFKREEQNFVVQNEINNLSFLTGDSKTKMAKSFLPKAGGQDQERKHKKR
RGDFYSVQTSLIVAALKKMLPIGLNMCTPGDQELILLAKMRYGLKDTDEEVKEHIRQNLH
LQEKSADPAVQWQLNLYKDVKMKTEDTLDPERSIERIQSISAAVFHLEQVEQPLRSKKCV
WQKLLSKQRKRAVVACFRMAPLYNLPRHTINNYFLNSYCHFWLGRIQASSDRDGLLAVLT
KTKTDEEEEEITDTQPDPLHQLILHFSHNALTECSSLEEDQLYIAYADMMAKSCAENEEE
DEEGKEKTFEEKEMEKQKTLYQQARLHDRGAAEMVLQMISASKGHLGPMVTFTLKLGISI
LNGGNITVQQKMLDYLKEKRDVGFFKSLSGLMQSCSVLDLNAFERQNKAEGLGMVTEEGS
INVRERGSKVLQNDEFTKDLFRFLQLLCEGHNNDFQNFLRTQTGNTTTVNIIISTVDYLL
RLQESISDFYWYYSGKDVMDEAGQRNFSKALAVAKQIFNSLTEYIQGPCIGNQQSLAHSR
LWDAVVGFLHVFANMQMKLSQDSSQIELLKELMDLQKDMIVMMLSLLEGNVVNGTIGKQM
VDTLVESSSNVEMILKFFDMFLKLKDLTTSENFKEHDPDRKGVISKKEFQKSMENQKQYS
QSEIEFLLSCAEADENDMFNYEEFVKRFHEPAKDIGFNVAVLLTNLSEHMPHDSRLSTFL
NLAESVVNYFEPYLGRIEIMGGGKRIERVYFEISESSRTQWEKPQVKESKRQFIFDVVNK
GGESEKMELFVNFCEDTIFEMQLASLISEPDAAERQEEDDVEDDARSVDLDEDDEDGARE
SSSAFALACVSMRKSLSNLRQLLTFKSMRRQYRKLRKMSVREMIRGFFFFFWMIFTGMFR
FLYSLVWGFFHILWSTLFGGGLVEGAKNMKVTDILGNMPDPTQFGIHGDVLELEKLEYCD
MSSVAELGRMAAGDQAEMDLMTELMYMQPRREGGKHGMEPGLGDVSEVIGVDTPSLASAV
HQKKAQEAASKQTDESETKSESEKADVEDREKKDQDKGKEESVSDSQTDEEKKPQKKRRG
QRKEQAEAFMAAFLAGLDVHQTKTLNYLARNFYNLRFLALFVAFAINFILLFYKVTGEDS
DDLDPWTRREEEEDEGAVEYFVLQESTGYMAPTLRFLAVMHTLISFLCVLGYYYLKVPLV
VFKREKEIARKLEFDGLYITEQPSDDDIKGQWDRLVINTPSFPNNYWDKFIKRKVINKYG
DLYGAERIAELLGLDKSALDFNPTEETVIKDASLLSWLSSTDTKYHVWKMGVVFTDNSFL
YLVWYTTMSILGHYNNFFFAAHLLDIAMGFKTLRTILSSVTHNGKQLVLTVGLLAVVVYL
YTVVAFNFFRKFYNKSADEDEPDMKCDDMMTCYLFHMYVGVRAGGGIGDEIEDPAGDPYE
LYRILFDITFFFFVIVILLAIIQGLIIDAFGELRDQQEQVKEDMETKCFICGIGNDYFDT
TPHGFETHTLQEHNLANYL
NT seq
8700 nt
NT seq
+upstream
nt +downstream
nt
atgaggccccccagtgggagtctggactcactgacggggaaattgaagctcagactgaac
aagatctggacggagggtgcagtgaggtatcagtgggaaaatgcagttgatgttcttcat
ctccagtccctgggcaggggattccagtggaggagtgaggaggaggatcaggacttcatg
tctattaaagcctgcctgctcgctcctcatgtctataagatcaaagcgaacctgaaggag
ctgatctctcagacgatggtgagctgggctcaggagacacacatccaggacccggagctg
gtgcggctgatgttcagtctgctgagacgacagtacgacagcatcggagagctgctccga
gccatgaggaagacctacaccatcagcgccgcctccgtccacgacaccatccacctgctg
gcgcatcatccccacatccgccccatcctcagcattccgaatgaggaagaacaactaaca
acccagtctctcagggacatcatgaataataaggtgttctaccagcatccgaacctgatg
cgtgttctggggatgcacgagaccgtgatggaggtgatggtgaacgtcttgggaggggaa
aacgtctcagcgtctccgtccatgagaggatccactcctctagacgtggcggcttcatca
gtgatggacaacacatttggtcccgtttggttgcatcatgaagcgacagtcgtgacgtat
ctggccggctgcggtctgcagagctgtccaatgctcctggccaagggatatccagacatc
agctggaaccctatcgagggcgaacgttacctgtccttcctgcgattcgccgtgtttgtc
aacggcgagagcgtggaggagaacntcagtgtggtggtgaagctcctgattcgtcgtccc
gagtgtttcggtcccgctctgagaggagaaggaggaaacgggctgctggcggcaatgaag
gaggccatcaagatctcagagaaaccccagcctggatctgcccagcaccgggccaccggc
tcacctccactgagggcgaggaggaagaggaagtggttccatgaatggggaacgccattc
ctgtccttctactcggctctgatcgatctgctgggccgctgcgctcccgagatgcacctg
tctcaataagggggtaaaggtgaagctctgaggatccgtgccatccttcgctctcctctg
gttcccacggaggatctggtcggcatcattagcatccctctcaagatgccctgtcacggc
agcgtgtctgagcctgacatgtcatgccactttctgccttcggaccacaaggcccccatg
gtgctgttcctggagcgcgtgtacggcatcgaggaccagagcttcctgctgcatctgtta
gaggtgggcttcctgccggacctgagagccgccgcctcgctggacacggaggctttgcgc
accacagaaacagctctggcaatgaacaggtacatcggttcggccgtgctgcccctgctg
acccgctgcgctcctcacttctccggcacagagcatcacgctgcgctcatcgactccacg
ctctacactgtctaccgcctgtccaagggctgttcgctcaccaaagcccagcgcgacgcc
atcgaggggtgtctgtgtgttgtgttcaggtacctcagaccctccatgctccagcatctt
ctgcgccgactggtgtttgacgtgccgttgttatctgaatactgtaagatgcctctgaag
ctgctgacgaatcattacgagcagaactggaagtattactgtctgccgtccggatggggg
agttacggtcaggcgtctgaggaggagctgctgctcaccaagaagatcttctggggaatc
tttgactctttgtctcaaaagaagtacgagcaggatctgtttaagatggccatgccgtgt
ctgagtgccatcgctggagctctaccaccggactacatcgactccacgctcagcaccacg
ctggagaaacaggtgtctgtcgacacgcagggaaacttcgaccccagacccgtaaacaca
gccaacatctgcctgccggagaagctggagtacatcgcaaacaaatacgctgaacattcc
catgagaaatgggctgctgagaaggtgcttctgggctggaaacacggagaaaacatcgac
gagaaagcaaaaactcacccgatgctgagatcctacaagtccctgacggagaaggagaag
gagatgtattgctggacggtgcgcgagtccttgaagagcatgctagcgctgggctggagc
atcgaccgcaccagagaagaagagagcgtgtttcagcagagagacatctccgataacgca
gaacacattcacagacgtgacgaagcgtttgttatcgtgtgctttcaggggaacggcttc
aatccaaacccgctggacatgagcagcgtccttctgtccagagaactgcagtcgatggtt
gagatcgtggctgaaaactatcacaacatctgggccaagaaaaagaagagtgatctgtgc
agcagagccgcaggaggagctcatccgctgctggtgccctacgacacgctcacagccaaa
gagaagaccagagaccgagagcgagcgcaggatctcttccgcttcctacagatcaacgga
tacgccatcagcaggcgtctgaagcacatggagcaggactcgtcctcgatggagaaacgc
ttcgcctaccgcttcctgaagaagctgctgaagtacgtggactcggcgcaggagttcatc
gctcacctcgaggcgatggcgaccagcggaaagaatgacagatcgccacatgaacaggaa
atcaagttctttgctaaggtgctcctccccctcatagaccagtactttaaaaaccactcg
ctgtacttcctgtcgtctcccactaagaatctgagcagcagcggatacgcgtcgaacaaa
gagaaggagatggtcaccagtctgttctgtaagctggccactctggttagacacaggatc
tctctgtttggaagtgactccaccactatagtcagctgtctgcacatcctcgcacacacg
ctggacaccaggactgtgatgaagaccggatcggagctggtcaaagccggtttgaggacg
ttctttgagagcgcggctgaagatctggagaagactctggagaacctgaagctggggaag
ttcacacactcgcgcagtcagatgaagggcgtctcgcagaacatcaactacaccacagtg
gctctgctgcccatcctcaccgctctgttcgagcacatcactgaacaccagttcggctcc
gaccttctgctggatgatgtgcaggtgtcgtgttatcggatcctgaccagtttatactcg
ctggggacgggaaagaacatctatgtggagaggcagctgccggcgctgggcgagtgtttg
gcgactctagccggtgcgatgcccgtggcgtttctggagccgcagctcaacacacacaac
ccctgctccgtcttcaacaccaagacgtctcgagaacgagctctcgtagggctgccggag
tcggtggaggacgtgtgtcctgagatgcctcgtctggacggtctgatgaaggacattaat
gacatgtcagagtccggagcgcgctacacagagatgccgcacgtcatcgaggtggtgctg
cccatgctgtgtaattatctgtcctactggccggcccgcgggcgtctgcaacctcctnng
gatgaagcgctctgcagcagcaccgtcacctccgaacacctcagcctcatcctcgggaac
atcctcaagatcctcaacagcaacctgggcatcgacgaggcctcctggatgaagcgcatc
gcagtgtacgctcagcccatcatcagtaaggcgcgcgccgatctgctgaagacacacttc
ttgccgacgctggagaagctgaagaagaagacggtgaaggtggtgtcggaggaggagctt
ctgaaagctgatgggaagggcgacacccaggaggcggagcttctgatcctggatgagttt
gcggtgctgtgcagagatctgtacgccttctaccccatgctcatccgctacgtggacaac
aacaggtctcggtggctgaaggagccggatgcggattccaatgagctcttcaggatggtg
gcagaaatcttcatcctgtggtgtaaatcacacaacttcaagagggaagagcagaacttt
gtcgttcagaacgagatcaacaacctctcgttcctcaccggcgacagtaaaaccaagatg
gcaaagtcattcctccccaaggctggaggtcaggatcaggagcggaagcataagaagcgt
cgcggagacttttactccgtccagacgtctctgatcgtggcggcgctgaagaagatgctg
cccatcggtctgaacatgtgcacgccgggagaccaggagctcattctgctggccaagatg
cgatacggcttgaaggacacagatgaagaggtgaaggagcacatcagacagaacctgcac
ctgcaggagaagtcggcggatccggccgttcagtggcagctcaacctctataaggatgtg
aagatgaagacggaagacactttggatccggagcggagcatcgagagaatccagagcatc
tcggccgctgtattccaccttgagcaggttgagcagccgttgcgctctaagaagtgtgtt
tggcagaagttgttgtctaagcagcggaagcgagccgttgtggcgtgtttcagaatggcg
ccgctctacaacctgcccaggcacacaattaataattacttcctgaattcgtactgtcac
ttttggctgggcagaattcaggcgagttctgaccgtgatggtctgctggctgtgctgacg
aaaacgaagactgatgaagaggaggaggagatcacagacactcagccggaccctcttcat
caactcatcctgcacttcagtcacaacgcactgacagaatgcagctctctagaggaggat
cagctgtacatcgcatatgcagacatgatggctaagagctgtgctgaaaatgaggaagag
gatgaggaaggaaaagagaaaacatttgaggagaaggagatggagaagcagaagactctg
taccaacaggcccgactccatgacagaggagcagcagagatggtcttacagatgatcagc
gctagtaaaggtcatttgggtccgatggtcacattcacgctgaagctcggcatctccatt
ctcaacggcggaaacatcacagtccagcagaaaatgctggactatttgaaggagaagcga
gatgtgggtttcttcaagagtctgtcaggactgatgcagtcgtgcagtgttttggatctg
aacgcgttcgagcgtcagaataaggccgagggtttggggatggtgactgaggaaggttcc
atcaacgtgagggagcgcggctctaaagttcttcagaatgacgagttcaccaaagatctg
ttcaggttcctgcagctcctgtgtgagggacacaataacgacttccagaactttctcagg
acgcagacgggaaacacgaccacagtcaatataatcatcagcacagtggactatctgctc
agactgcaggagtcaatcagtgatttttactggtattactctggtaaagacgtgatggac
gaggcgggtcagcggaatttctccaaagctctcgctgtagccaaacagatcttcaactcg
ctcactgaatacatacagggtccgtgtatcgggaaccagcagagtttggctcacagcaga
ctttgggacgccgtcgttggatttctgcacgtcttcgccaacatgcagatgaagctgtca
caggactccagtcagatcgagctgctgaaagagctgatggatctgcagaaggacatgata
gtcatgatgctgtcactgctggaaggaaacgtggtgaacgggaccatcggcaagcagatg
gtggacactctggtggagtcctccagcaacgtggagatgattctcaagttcttcgacatg
ttcctcaagctgaaagatctgaccacctcggagaacttcaaggagcacgaccccgaccgt
aaaggcgtcatctccaagaaggagttccagaagtccatggagaaccagaagcagtactct
cagtccgagatcgagttcctgctgtcctgcgccgaggccgacgagaacgacatgttcaac
tacgaagagttcgtcaagcgcttccacgaacccgccaaggacatcggcttcaacgtggcg
gttcttctcaccaatctgtcggagcacatgcctcacgattcccgtctgtccaccttcctg
aacttggccgagagcgttgtgaactatttcgagccctacctgggccgcatcgagatcatg
ggcggcggcaagagaatcgagagggtttacttcgagatcagcgagtccagccgaacgcag
tgggagaaaccgcaggtcaaagagtccaagcggcagtttatcttcgatgtcgtcaacaaa
ggtggagaatctgagaagatggagctgttcgtgaacttctgcgaggacaccatcttcgag
atgcagctggcgtctctgatctccgagccggacgctgctgagagacaagaagaggacgat
gttgaagatgatgctcggagtgtggatctagacgaggacgatgaagacggcgcacgggag
tcttcctcagcgttcgctctggcctgcgtctccatgaggaagagtctgtccaacctgcgg
cagctactgaccttcaagagcatgaggagacagtatcgcaagctgaggaagatgagcgtc
cgggagatgatccgaggattcttcttcttcttctggatgatcttcactggcatgttccgc
ttcctctacagcctggtctggggcttcttccacatcctgtggtccacgctgttcggcggc
ggtctcgtggaaggagccaagaacatgaaggtgacggacattctggggaacatgccggat
cccacgcagttcgggatccacggagacgttctggagctggagaagctggagtactgcgac
atgtcgtcagtggcggagctcgggcgcatggcggcaggagatcaagcggagatggacctg
atgacggagctgatgtacatgcagcccaggagggaaggaggcaagcatggcatggagccg
gggctgggagacgtgtccgaggtgatcggagtggatactccatctttagccagcgccgtc
catcagaagaaagctcaggaagccgccagtaagcagaccgatgaatctgagaccaaatca
gagtcggagaaggcagatgttgaggaccgagagaagaaagaccaggacaagggcaaagaa
gagagtgtgtcagactctcagacagacgaagagaagaagccgcagaagaagaggcgcggt
cagaggaaggagcaggccgaggccttcatggcggcgtttttagccggtctagacgtccat
cagaccaaaaccctgaattatctggccagaaacttctacaacctgcgattcctggctctg
tttgtggcgtttgccatcaacttcatcctgctcttctacaaggtgaccggtgaggattcg
gatgatctggacccgtggacgcggcgagaggaggaggaggatgaaggtgcggtggagtat
tttgttcttcaggagagcacgggttacatggctccgaccctgcgcttcctcgccgtcatg
cacaccctcatctccttcctctgtgtgctgggatattactatctgaaggtgccgctggtg
gtgttcaagcgtgagaaggagatcgcgcgcaagctggagttcgatgggctgtacatcacc
gagcagccgtctgatgatgatattaaaggccagtgggacagactcgtcatcaacacgccg
tcttttcccaacaactactgggacaaatttatcaaacggaaggttattaataagtacggt
gatctgtacggagccgagcggatcgcggagctgctgggtttggataaaagtgctttagac
ttcaatcccactgaagagacggtcattaaagacgcctcgctgctgtcctggttgagctcc
actgacaccaagtatcacgtgtggaagatgggcgtcgtgttcactgataactcgttcctg
tatctggtctggtacaccaccatgtccatcctgggacattataataatttcttcttcgcc
gctcatctgctggacatcgccatgggcttcaaaacactgaggaccatcctgtcctccgtc
acacacaacggcaaacagctggtgcttacagtcgggctgctcgctgtggtcgtgtatctc
tacaccgtcgtagcattcaacttcttccgcaagttctataacaagagtgctgacgaggac
gagcccgatatgaagtgtgatgatatgatgacgtgttatctgttccacatgtacgtgggt
gtccgtgctggcggcgggataggtgacgagattgaggaccccgcgggcgacccgtacgag
ctctaccggatcctgttcgacatcaccttcttcttcttcgtcattgtgatcctgctggcc
atcatacaaggtttgatcatcgatgcgtttggagagctgagagaccagcaggagcaggtc
aaagaggacatggagaccaaatgcttcatctgtggaatcgggaatgactatttcgacacg
acgccgcacggctttgagactcacacgttacaagagcacaacctcgccaactacctgtga
DBGET
integrated database retrieval system
