Cyprinus carpio (common carp): 109086725
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Entry
109086725 CDS
T05134
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109086725
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
109086725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
109086725
NCBI-ProteinID:
XP_042613239
UniProt:
A0A9Q9Y598
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All DBs
Position
A5:complement(25001432..25015928)
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AA seq
1664 aa
AA seq
DB search
MRRARISIKPNVRPGGRSVAPAAEDKSSQGSTAVDENQQTHPSEPQSQLDVKESAVATGD
GNVPGSPSEKASLNINEGAPSSVSTPATTALQRRSRFSATPNLARPQVRSAPPPSTGKTA
SLPSETSKASSPFQAAKSFPQSPIPVDISRDHSQNSTFSDATKAAHYPPSSPCLPSTSGC
PESLLSTASHQEPCQTPQKIPNEDFGPQTGETSVSCTLSPYVKLSRVDGPDSPLRNKTSS
DKQRVLRALKLKELMKLERKKEGMEKKSRRPKCEPGFEADHDKMTLADFIYYLPESNPMK
SSLSTEETQTQTAAPPTPTVQKNMAVAGEEDDDDDNDEELLVPKVRVAEDGSLILDEESL
TVRVQRTSDTVVENANPLFERGSTTTYTSFRKKYYVKSWSVRETDMFYLAISMVGTDFSM
IAQLLTHRSRAEIKSKFKKEERVNAWRVDKAFRNKRPYDGEFFSFLLKRVLAKDKQKGKS
IKLVVKSSKAKKCKGGKKVKQLEDKDSINDDEDDDELCSVDNICFDLEKENEDSSNMNVA
DVPSSTSKKRKRTKDTEPKTCKASKKNKTPKKAKCLMEAEDRDLVCVDDDFVEEDSVNAD
NKDRSCMPESKKTRKQSKKGDQKGKELKKEEKPKKKKNKKTLEVRNEEPTDGESGAVNEE
HNEASAVPTKKRKRSKKSEKEEGEPTKRERKTKKSKTSQEECTGSELGADGSEVSSTAPG
AEEDQGEKSFPESAAEEISKSSFKRSKRPSLLKRKVKICSEPKATVEIEDTVEECQDESC
REAENESRIICLAEDQLQNQPVVVLERTPPRLKDSQNSSEIQDQPQSCQSPQHSPGRQMR
AEKVKRNLTASGHGSEVLTAGPGVKEDQGEKLIPESTAKEEISQSLFKCSPGQRTTAEKN
QHNLTASEGDQIDQCHTGSDPSPEDRSSTAMENQVGMQDSKEADQRMEEGLNLHHLEFLT
SSEVNGQTLLKRAVVLVSHDEVKHYLRSQAQTTAEESTTSESQQDAAPATDLHVGEHRDG
LEEQGCTSGTLEERVSQEVKETDTASISAQQSTVEKRRRLSKPKPSLSRAAQSIHRPLNV
QKTDFSENTPYFKHDSVQLQCSSPVEVQVKNTPNECLEEEHRDRPEKESTCSVTPEENGP
QEVQVQDDEAETTVDDLPSLTSVGSPPGASKILPILEMPQVLDTTPSDEDVPERRREFDR
SPSQTSENEDLITDQKEEDSEPVASEVTDVMIEESQTELKRIFPVSCSVDGSSVYTQDDI
APERDSQFAKQTPNLEGTSPVMISPQQTSEPKEDPSEKPEPQSPVQAQHSNLDHDLENIS
REDKILSSEVDLQGCKLDEDLLSPVPLLSSTQTLSAKVLVDGTDKRNTEPNDQVLSDASS
APFEAHSLVSSFSDPPNEHASTLCDMDTMQFGKCAAEDIQIPDEQDSGKQDCTEEPSEAS
EECSAPLNQNSKSDISDSAGVDTGAVGNDKYSEEEPTFILTLYEIPASQLFHEAAFGQQG
TPRYELQPAQFQTTSLLSSSSHFHSVTLEASSASLHMASEETSNPCKSSSHKLVDDSMDP
LLKDAVDGARTQLISSQECSRDDVTSLIGPPTMFSCNSVMPTDVPKLDEILTESPGTKAP
TQRRCKIKVKPNLKPGVKVGPSKNGQFDCAPSQYLPPSQATAQT
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagagcaagaattagtattaagcccaatgtccggccaggaggtcgaagtgtggcg
cctgctgcagaggacaagagctctcaagggtccacagcagtagatgaaaaccagcaaacc
catccatcagagccacagtctcagctggatgtcaaagagtctgctgtggcgacaggagat
ggaaatgtgcccggctctccatcagagaaagcatcactgaacattaatgaaggcgcgcca
tctagcgtcagcacacctgcaactacagcacttcagaggaggagcagattctctgccaca
ccaaacctagccagaccccaagtccgttctgctcctcctccatccactggaaagactgct
tctcttccatcagagacatccaaggcatcatcccctttccaggcagctaagtcttttcct
cagtcccccatcccagttgatatcagcagagaccattcacaaaactctacattctcagat
gccaccaaagcagcccactaccctccatcctcaccatgtcttccatcaacatctggctgt
ccagaatctctgttatcaacagcgtctcaccaagagccttgccaaactccccaaaaaatc
ccaaatgaggattttgggccgcaaacaggagaaacttcagtgtcatgcacactctcacca
tatgtgaaactgtcacgtgttgatggaccagactctcccctcaggaacaaaacctcttca
gacaagcagcgggtcttgagggccctcaaactgaaagaactgatgaagctggagaggaag
aaagaaggaatggagaagaagagtagacggcctaaatgtgagcctggctttgaggcagat
catgacaaaatgaccttagctgacttcatttattacctgcctgagtcaaacccgatgaag
tcctccctttccacagaggagactcaaacacagaccgctgctccaccgactcccacggtg
cagaaaaatatggcagtagcaggtgaggaggatgatgatgatgataatgatgaggaactg
cttgttcccaaagtcagggtggcagaagatggctcactgattttagatgaagaaagtctg
acagtgcgtgttcagaggacgtctgatacagttgttgagaacgcaaatccactgtttgaa
cgaggctctactacaacatacacaagtttcaggaaaaaatactatgtgaaaagctggtct
gtcagagagacggatatgttctatctggccatcagtatggtgggaacagacttctccatg
attgctcagctgttgactcaccgtagcagagcagaaattaagagtaaatttaagaaggag
gagagagtgaatgcatggcgagtggataaagcattcagaaataagcgaccatatgacggc
gagtttttcagtttcctgctgaagagggtcttggctaaagacaaacaaaaaggcaaatcc
ataaaactggttgtaaaatccagtaaagcaaagaaatgcaaaggtggtaaaaaagtgaaa
cagctcgaggacaaagactccattaatgatgatgaagatgatgatgaattgtgcagtgtg
gacaatatctgttttgatttagaaaaggagaacgaggacagcagtaatatgaatgtagcg
gatgtgccgtcgagcacaagcaagaagcgaaaacgcacaaaagacactgagccaaaaaca
tgcaaggcgagcaagaaaaacaagacaccgaaaaaagccaaatgcttaatggaagctgaa
gatcgtgaccttgtgtgtgtggatgatgactttgtggaggaagactccgtaaacgcagac
aataaagatcggtcatgtatgcctgaatcaaaaaagacccgcaaacaatcaaaaaagggt
gaccagaaggggaaagaattgaaaaaagaagaaaaaccgaagaaaaagaagaacaaaaag
acacttgaagtacggaatgaagaacctactgatggagaaagtggtgcagtgaatgaggag
cacaatgaggcatctgccgtcccaactaaaaaacggaaacgctccaaaaagagtgagaag
gaagaaggcgaacctacaaaaagagaacgaaagactaaaaagagcaaaacatcacaggaa
gagtgtactggatctgagctgggtgcggatgggagtgaagtctcgtcaacagcccctggt
gctgaagaggatcaaggggagaagagctttccagagagtgcagctgaggagatttcaaaa
agctccttcaaacgttcaaaaaggcccagtttgttaaaaaggaaagtcaaaatatgttct
gagccaaaagcaacagtagagatagaggatacagtagaagaatgtcaagatgagagctgc
cgagaagcagagaatgagtcgaggatcatctgtcttgctgaggatcagctccagaatcag
cctgtagttgttctggagagaactcctccgaggctaaaagattcacagaactcctctgaa
atccaagaccaaccacagtcctgccagagcccgcagcattctcctggacgccagatgaga
gcagaaaaggtcaagcgtaatctgactgcttcaggtcatggtagtgaagtcttgacagca
ggccctggtgttaaagaagatcaaggggagaagctcattccagagagcacagctaaggag
gagatttcacaaagcttgttcaaatgttctcctgggcagcggacaacagcggaaaagaac
cagcacaatctgactgcttcagaaggagatcagatagaccagtgtcatactgggtcagat
ccgtcaccagaggacaggagcagcactgccatggagaatcaagtgggcatgcaagactct
aaagaggctgatcaacgtatggaggagggtttaaatttacatcatttagagtttctgact
tcatctgaagttaatggtcagacattactgaaaagagcagttgtgttggtgtctcatgac
gaagtgaagcactacctcaggagtcaagcacaaaccactgcagaggaatcaacaacctct
gagagtcagcaggacgcagcacctgccacagaccttcacgtgggagagcatagggatggt
cttgaggaacagggctgtactagtggtactctagaagagagggtctctcaagaagtgaag
gaaaccgacaccgcctccatatctgcccaacaaagcactgtcgaaaaaaggagaaggctt
tccaagcccaaacccagtctgagccgggcagcacagtccatccacagacctctgaatgta
cagaagacagattttagtgaaaataccccgtatttcaaacatgactcagtgcagctgcag
tgtagcagtcctgtggaagtccaagtgaagaataccccaaatgaatgcctcgaagaagag
cacagggaccgtcctgagaaagagagcacatgtagtgtcactccagaagagaacggccct
caggaagttcaggtccaggatgatgaagcagaaaccactgtagatgatcttccttcctta
acatcagttggaagtcctccaggagcgagtaagattttacccatccttgagatgccccag
gttcttgacaccacaccatcagatgaagatgtgcctgaaagaagaagagaatttgatagg
tctccatcgcagacgtctgagaatgaagatctaattactgatcagaaggaggaagattca
gagcctgttgcatctgaagtcacagacgtcatgattgaggaatctcagacagagctgaag
aggatttttccagtcagctgttctgtggatggttcctcagtttatactcaagatgatatt
gccccagagagagacagtcagtttgctaagcaaacacccaacctagaagggacatcccca
gtcatgatcagccctcagcagacctcagagcctaaagaagatccttctgaaaagccagaa
cctcagagtcctgttcaagcccagcacagtaatttggatcatgacttagagaacatctcc
agagaagataagattttgtcatctgaggtggatttacagggatgtaaactggatgaggat
cttctgtctcctgtcccattacttagctcaacacaaactttatccgcaaaagttcttgtg
gacggcactgataaaagaaatacagaaccaaatgaccaagttctcagtgatgcttcatca
gcaccatttgaagcacacagtctggtttcatctttttctgatcctcccaatgaacatgca
agcaccctgtgtgatatggacacgatgcagtttggcaagtgtgcagctgaagacatccaa
ataccagacgagcaggattctggaaagcaagattgcacagaagagccatcagaagcttct
gaggaatgcagtgcccctctgaatcaaaattcaaaatctgacatttcagattcagctgga
gtggatacaggtgcagttggtaatgataaatattctgaggaggagcccacctttatttta
actctatatgagattccagcctctcagctatttcacgaggctgcctttgggcagcagggt
actccccgttatgaactgcagccagcacaattccaaacaacctcactgttgtcgagcagt
tcacattttcattctgtcacattagaggcttccagtgcatctctgcatatggcatcagaa
gagaccagtaatccatgtaaaagtagctcgcacaagttagtggatgactccatggatcct
cttttaaaggatgcagtagatggtgccaggacacaattgatatcctcacaggaatgcagt
cgtgatgatgtgacctctttaattggtccacccacgatgttctcctgtaattctgtcatg
ccaacagatgtgccaaagttggatgagatcctgacagaatccccaggaactaaagctccc
actcaaaggagatgcaagataaaggtcaagccaaacctaaagccaggtgtgaaggttggg
ccttcaaaaaatggccagtttgactgtgcacccagtcagtatctaccaccatctcaagcc
acagcacaaacatag
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