Cyprinus carpio (common carp): 109086740
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Entry
109086740 CDS
T05134
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109086740
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109086740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109086740
Spliceosome [BR:
ccar03041
]
Complex B
Other components
Prp19-related factors
109086740
Complex C
109086740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
109086740
NCBI-ProteinID:
XP_042602330
Ensembl:
ENSCCRG00000052579
UniProt:
A0A9Q9XIP6
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All DBs
Position
B20:complement(5339762..5346122)
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AA seq
541 aa
AA seq
DB search
MSLASFLPAPTQLSQDQLEAEERSRLQRSQSTALVSTRREPPPYGFRKSWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQNKDKVIFSKYTDML
PKEVLNEDDPELQKPDEEAVQELTEKTRSALEKQVSQKIAAAMPVRAADKLAPAQYIRYE
DSQNINLNKGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSR
KMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIAD
RKAREAVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKAHGDKGGEDTEVRERD
EIRHDRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFN
QNKGMDSGFAGGEDEMYNVYDQPFRGGRDMAQNIYRPTKSADKDMYGDDLDTLMQSNRFV
PDREFSGADHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSGRSKDYDHEKKRRK
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcgagttttctccctgcacccacccaactgtcccaggaccagctggaggca
gaggagaggtctcgtcttcagaggtcccagtccactgctttggtctccacccgcagagaa
cctcctccttacggcttcagaaaatcatgggtgccccggtcactagaggactttggagat
ggaggagcttttccagagatccacgtggcccagtttcctctagaaatgggtagaaagaaa
aggacctctaatgctctggcagtacaggtggatgcagagggcaagatcaaatatgacgcc
attgctaggcaaggtcaaaacaaagacaaggtcatattcagtaaatacacagacatgctt
cctaaggaagtgctgaatgaagatgatcctgagctgcagaaacctgatgaagaggctgta
caagagcttacagaaaagaccagatcagctctggagaaacaggtctcacagaaaattgct
gccgccatgccggtacgtgctgcagacaaactggccccagctcaatatatcaggtatgag
gattcacaaaatattaatttaaataaaggactcgcatttaactccggtgcaaaacagaga
gttatccgtatggtggaaatgcagaaagatccaatggaacccccgcggttcaaaatcaat
aagaaaattcctcgtggacctccatcccctcctgctccagtcatgcactctccaagcaga
aagatgactgtgaaagaacagcaggagtggaagattccaccttgtatatccaactggaag
aacgcaaagggttataccattccgctggacaagcgtttggctgctgacggacgaggactt
caaaccgtccacatcaatgagaactttgccaagctggctgaggctttgtacattgcagac
agaaaggccagagaggctgtggagatgagggctcaagtagaaaagaagatggcccagaag
gagaaagagaagaaagaggagaagctgagagaattggctaaaatggccagagacaggaga
gctggtatcaaagcccacggtgacaaaggtggtgaggacacagaagtccgggagcgtgac
gagatccgtcatgataggaggaaagaaaggcagcacgacaggaacatctccagagccgct
cctgataagaggtcgaaactacaaagagatcaggacagggacatcagtgagcttattgcc
ctgggccagccgaacccccgtacctccagtgaggctcagtatgaccagagactcttcaat
caaaacaaggggatggacagtggttttgctggtggagaggatgagatgtataatgtgtat
gatcagcccttcagaggtggtagagacatggcacagaatatttacaggcccactaagagt
gcagataaggacatgtatggagacgacctggacacactcatgcagagcaacaggtttgtt
cctgatcgggagttctcaggtgctgaccacggcccccgcagggatgggcctgtgcagttt
gaggaggatcctttcggtttggacaagttcttggaagaagccaaacagcacggaggctcc
aaaagggcatccactagtgggcgctccaaggactacgaccatgagaagaaacgcaggaag
gagtga
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