Cyprinus carpio (common carp): 109086931
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Entry
109086931 CDS
T05134
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109086931 (gle1)
03015 mRNA surveillance pathway
109086931 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109086931 (gle1)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109086931 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
MCRA
VBS_C3G9
Motif
Other DBs
NCBI-GeneID:
109086931
NCBI-ProteinID:
XP_042617523
Ensembl:
ENSCCRG00000013852
ENSCCRG00000040043
UniProt:
A0A9Q9YC74
LinkDB
All DBs
Position
A8:2446544..2458458
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AA seq
703 aa
AA seq
DB search
MHSENLRWETLGALKNSPKGKLKYSPDWLEKGEDILAGCVEVSSLSPLSGQILKRLSPRP
RLNTCSLTSCVRDTSPGLSEEGSFPVSPRQISSPVSIRAEEDEQKKAEEIKEAPAASVSS
PPAMSVLSPRATQMAGCILMCEHKHKAKAKAELSLRLEQQERLVATVSSCESEQLKRFEE
LMELKQRQEYQSMRDMMEKETQESLGRQEKMREEHRHRMKILNLRLREAEQQRLREAELE
RQRQVEGRERHRAINAIQEEVLQLNQLLQPRPSTQTDSALDHTPYITRGNQLCSQVSEVV
PASADGQFPSVEDLNVAERALQEMRSLVRNLQDEVTQAVERKRKEQEEEEEEKKRHEELK
AQQEEQQKNAARSAKEKARKQGLQTGADDSTLKWYNALQDSAARCAQAFDELSTAKDTQT
KKLKMELQKAATTPVSQIANISGAPLKEAFEKIDKLLSGRPVTSAGKTVSTSQHPQGLEF
VSYKLAEKFVKQGEEEVASNHSAAFPIAAVASGIWELHPAIGDLILAHLHKKCPYAVPHY
PPMERGTSVEDYQKILGYRVDDSKVEGQDSFLKRMSGMIRLYAAIIQMRWPYTGKQGPHP
HGLNHGWRWLAQILNMEPLADITATILFDFLEVCGNALMRQYRGQFWKLILLIIEEYFPR
IEAVTSTGQMGSVTRLKQFLETSLRTKQIPAHRSELGSAFFKS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcactctgaaaatctacgatgggagactttaggagctctgaaaaactctccgaagggg
aaactcaaatacagtccagactggctggaaaagggggaggatattctggcgggttgtgtg
gaggtgtccagtctgtctcctctctcaggacagattctgaagagactgagtcctcgtccg
cggctcaacacctgctctctgacttcatgcgttcgtgatacgagtcccggcctttcggaa
gagggttcgttccccgtcagtcccagacagatctcgtctccggtctccatccgcgctgag
gaggatgagcagaagaaagcagaagaaataaaggaggctcctgcagcgagcgtcagctcg
cctccagcgatgtccgtcctgtcgcccagagccacacagatggccggctgcatcctcatg
tgtgagcacaaacacaaggccaaagcaaaggcggagctgagtctcagactggagcagcag
gagcggctggtggccacagtctccagctgtgagtctgagcagctcaagcgcttcgaggag
ctgatggagctcaaacagagacaggagtaccagagcatgagagacatgatggagaaagag
acgcaggagagtctcggccggcaggagaagatgcgagaggaacacagacaccgaatgaaa
atcctgaacctgcgtctgcgggaggcggagcagcagcgtctgcgggaggcggagcttgag
cgtcagcggcaggtggagggcagagagcggcacagagctatcaatgccatacaggaggag
gtgctacagctcaaccagctcctacagccacgcccctccacacaaacagactccgccctc
gaccacaccccctacatcacccgcggcaaccagctctgctcgcaggtgtcagaggtggtg
ccggcctctgcagacggtcagtttcccagtgtggaggatttgaacgtagctgagcgagcg
ctacaggaaatgaggtcactggtcagaaacctgcaggacgaggtgacacaggctgtcgag
aggaagaggaaggagcaggaggaagaggaggaggagaagaaaagacacgaggagctcaaa
gcccagcaagaggagcaacagaaaaatgcagcacggtctgctaaagagaaagccagaaaa
cagggtctgcagacaggagcagacgacagcactttaaaatggtacaacgcactccaggat
tcggccgctcggtgcgcgcaggcgtttgatgagctcagcacagctaaagacacgcagact
aagaaattaaaaatggagctccaaaaggctgcaaccacacctgtgagccagatcgcaaac
atctcaggcgcgccgctgaaggaggcctttgagaagatcgataagctgttgtccggtcgt
ccggtgacgtccgccggaaaaacagtgtctacgtcccagcatcctcaggggctggagttt
gtcagttataaactggcagaaaagtttgtgaaacaaggagaagaggaagtggcgtccaat
cattcggcagcgttccccatcgccgctgtggcgtcaggcatctgggaactccatcctgct
attggagaccttatactcgcccacctccacaagaagtgcccgtatgccgtgccgcactat
ccccccatggagcggggcacgtctgtggaggattaccagaagattctgggataccgtgtg
gatgactccaaagtggaaggccaggacagctttctgaagagaatgtcgggaatgattcgt
ctctacgcggctataatccagatgagatggccttataccggcaaacaagggcctcatcct
cacggcttgaatcacggctggcgctggctcgcacagatcctcaacatggagccactcgcc
gacatcacagcaactattctctttgacttcctggaggtctgcggaaatgctttgatgaga
caatatcgagggcagttctggaaactgatattgcttattattgaagaatactttccgaga
atcgaagcggtcaccagcaccggtcagatgggctccgtaaccagactcaaacagttccta
gagacgtctttgagaaccaagcagattcccgcccacaggagcgagcttggctccgccttc
ttcaagtcctga
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