Cyprinus carpio (common carp): 109087004
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Entry
109087004 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109087004
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109087004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_7
SH3_2
HEAT_Nup120
TPR_14
TPR_NPHP3
ChAPs
CFAP70_TPR_C
Motif
Other DBs
NCBI-GeneID:
109087004
NCBI-ProteinID:
XP_042626132
Ensembl:
ENSCCRG00000049476
UniProt:
A0A9Q9YTJ0
LinkDB
All DBs
Position
A14:complement(21184439..21196100)
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AA seq
1452 aa
AA seq
DB search
MACCCCYCCPIPCLRNCFLFSAISPAELDALWNDPPYALAAVSELFSPNDAMTADEEAEA
EAEVEAEGISREIYWRRKETFSGSSKVSSAGERFSSDVVLLFSGRRRSGVTPDGELQEAL
RTRLRVVESNSQDVVQLFKDLSARLVSVNAEKDSFIITFKTVEEIWKFSTYLALGYVARC
LENFLCDQSFWLDPALLSDVEICVTVDEDHLATLYLGLLLQEGTFFAKTLYNSDCREEEE
ELTYRRNDLVMVKDIGQETIWEGMLLSTGQHGLVPVHDMQPLPYPFYQWFLKKYPGNAGG
IPVTEGLFDHPVVVGTCVAVVDHNPIVKDELHLRKGDIIKIEGFLFNALNMFIGRHLTSG
EIGFVHKASVKPQSIEPLNGQLVFLSEEERVALTKLNPCFEPCQSDVLANLSCTDISTVY
RLDRLDDSDFTYIRNHPKSEQKSTVDQRRSTISENSGVTPYHSSPRQSFCASRNHLDRDS
EVLSFSLEDTFREMDEYEEDPPNFMDEGIWEADEAERCDPILTLLNLEYFQDTFQTLYDL
SYSFLDTFFHGLAEDEVLQHLENLREGAKKGRMLWAHRRACFLLGRLCAKKLKYSQARVY
FEEAQKVPVNGFDDKPLLTALYTNLTAVYLKQKMMDKLPFTLEKASALIMCLPCHNFCSV
DEFELLKPIMRKAIIEKDKYLEARTCYLSLCLFLRLRKIEDALPFVERLQFLTITLSAEQ
GRPIAPVDLNWMLCRLYHKKYLPYLTLASLSLDSGQEHSLDDAFQKIELFIKNSIRLNPH
WKESTSVLPAQVVVYLQQALSIASQGEDLRTQRDLCLSLASVYQQHGALEKAVPFAQKAA
QTGSQVNEEEGFEASILLAWLLVLTEEPIQAQNTLQPMLKSLDETDSPTQRGVVYNLLAL
SLRKQGRVQEAARNFYCALQISRENGNKRNEALALANLGCLSLSVGASGLAECFLLNSLH
LFQFLSESPTDQEHVQALLWLGRSYSDRGGSQEVRLCFEMGLLIAISANNLHSQMVVAKV
LSRHYADLLLYGQCIVYYEHCVGLCRMLKNKQLEGEYLELLSNLYLSLNTEKSSRKSLDY
SKQSLRISIDLGKRQEESETWLQVGRIYYLIHEDELADMYLKAAVKTALRMNDPCFAMSI
YEEAGDVFFKGHRNQLAALPFYRDGSLPFARSIKDVHSEFRLLSKLTELLIKQKQYEEAL
QYATLAVQVSATTGVPLNERVSFHRLASVYFSLGKYEMAENYYLKSLSLCPTALEHAIEV
RYYVKVYCRLADMTLYRLKDAFDAMGYFHLALAAALEDKESLXTLYIIYMKLAEIHANYI
PDAELSKSYMERAQSLRKELAGYTDSSDTEETHQDPAEAEPDTHTKTGQSGLQQGTSTXT
ESSMTDTSLTINAQEESEHILLHTSHKEDMDTNISEETDAGPPDQTNPETSCADNTNHTC
QSSLKEGLTFVL
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctgctgctgctactgctgtccgattccgtgcctcagaaactgcttcttattt
tcagcgatatcccccgctgagctcgatgccttatggaatgaccctccatacgctttagca
gccgtcagtgagctcttttcacccaatgacgccatgacagctgatgaggaagcggaggct
gaggccgaggtggaggcagaaggcataagcagagaaatttactggaggaggaaggaaaca
ttcagcggaagtagcaaagtatcttcagcaggagaacgcttctcttcagatgttgttttg
ttgtttagcgggaggcgacgatctggggtaacacctgacggtgagcttcaggaggcgtta
cgtaccagactccgagtagtagagagcaacagccaggatgttgttcagctctttaaggat
ctgtctgcaagactagtgtctgttaatgctgaaaaagacagctttatcatcacctttaag
actgtcgaagagatttggaagttctccacttacctggcactcggatatgtagcaagatgt
cttgaaaattttctctgtgaccagtcgttctggctggaccctgcattgctaagcgatgtg
gagatctgtgtaacagtggatgaagaccacttagctactctttacctaggacttctgcta
caggaaggtacattctttgccaagactttatataacagtgattgcagagaggaggaagag
gagctgacctataggaggaatgacctggtcatggttaaagacataggacaagagacaatt
tgggagggtatgctgctgtccacaggccaacatggtctggtgcctgtgcatgatatgcag
cctctgccctatccattttatcagtggttccttaagaaatatcccgggaatgcaggaggg
attccagttacagaaggcctcttcgatcatcctgttgtggtggggacttgtgtagcagta
gtggaccataacccaattgttaaagatgagctgcacttacgcaagggagacataatcaag
attgagggatttcttttcaatgctctgaacatgttcataggaagacacctcaccagtgga
gagataggatttgttcacaaggccagtgtaaaacctcagagtattgagcctctcaatgga
caattggtctttctcagtgaggaggaaagggtggccctgactaaacttaacccctgcttt
gagccctgccagtctgatgtactagcaaatctatcctgcactgatataagcactgtgtat
agactggatagacttgatgactctgatttcacttacataagaaatcatccaaagtcagag
cagaaatctacagtggatcaaagaaggagcaccatttctgaaaacagtggtgtaactccc
taccactcgtcaccacggcaatcgttctgtgcctctcggaatcatctcgaccgggactct
gaggtcctctcctttagcctggaggacacctttagagagatggatgaatatgaggaagac
cctccaaacttcatggatgagggtatctgggaggctgatgaagccgagagatgtgaccca
atcctgaccctcctaaatctggaatatttccaggacacatttcaaactctttacgacctc
tcctactctttcctggacactttcttccatggccttgcagaggatgaggtgcttcaacat
ctggaaaacttgcgagaaggagcgaagaaaggcaggatgctctgggcccaccggcgagcc
tgcttccttcttggccggctatgtgccaagaaactgaagtactcgcaagcacgagtgtac
tttgaggaggctcaaaaggtccctgtaaatggttttgatgacaaaccccttctaacagcc
ctgtataccaatctcactgctgtttacctcaaacagaagatgatggacaagctgccattc
actctagaaaaggcaagtgctctaattatgtgtcttccttgccacaacttctgctctgtg
gatgagtttgagctgctcaaaccaatcatgcgcaaagccataattgaaaaagacaagtac
ctagaggcacggacatgctacctctccctctgtctctttctccgtctaagaaaaatagag
gatgctttaccttttgtagagagacttcagttccttactatcactctgtctgcggaacaa
gggaggccaattgccccagttgatctcaactggatgctgtgcaggctttatcataaaaag
tatttgccctacctcacactagcttctttaagtctagactcagggcaagagcattccttg
gatgatgcattccagaaaattgaactctttatcaaaaactcaataaggcttaatccgcac
tggaaggagagtacttctgtgcttcctgcacaggtggtggtctaccttcagcaggccttg
tcaatagctagtcaaggggaagacttgaggactcagagggacctgtgcctgagcctggct
agtgtttaccagcagcatggagctttagagaaggctgtgccctttgcccaaaaagcagca
cagactggaagccaagttaatgaagaggagggatttgaagcatccatactgctggcctgg
ctattggtgctaacagaggaacccatacaagctcagaatacgctgcaacctatgcttaaa
tctttggatgaaacagacagtccgacacagcgtggtgtagtctacaaccttttagcccta
agcctccgcaaacagggaagagtccaggaagcagcaagaaacttttattgcgctctgcag
atctctcgagagaatgggaacaagcgtaatgaagcactagcactggctaacttgggctgc
ttatctctatctgtaggggcttcgggcttagcagagtgtttcctactcaattccctgcac
ctattccagtttctctcagagagtcccacagatcaggagcatgtccaggctttgctttgg
cttggcaggagctacagcgatagaggagggagtcaggaagtcagactatgctttgagatg
ggcctccttattgctattagtgccaacaatctgcacagtcaaatggttgtggcgaaagtt
ctaagtcgccattatgctgacttgctgctgtatggacagtgtattgtttactatgagcac
tgtgtggggctgtgcagaatgctaaagaataaacagctagaaggagagtacctggaactt
ctcagcaacctctatctctcactaaacactgagaagtcatcaagaaaatctcttgattat
tcaaagcaaagcttaaggatctccatagacctggggaaaagacaggaagagtctgagaca
tggctgcaagtgggccgtatctactatctgatccatgaagatgaactggctgacatgtac
ctaaaggcagcagtaaagacagccctgaggatgaatgacccatgctttgctatgagcatt
tatgaggaagcaggagatgtgttcttcaaaggacacagaaaccaactggctgccctacct
ttttacagagatgggagtttgccatttgcgcgcagcattaaggatgtgcactcagagttt
aggcttttgagcaaactcacagagctcctgataaagcagaagcagtacgaagaggcactg
cagtatgccacactcgcagtgcaggtcagcgccacaactggtgttcctctgaatgagaga
gtgtcttttcatcgtcttgcttcagtgtacttctctctagggaagtatgagatggctgag
aactactacctgaagtctctttcactctgccccactgcacttgaacatgccattgaagtt
cggtattatgttaaagtgtactgcagactggctgacatgaccctatacagattaaaggat
gcttttgatgccatgggctacttccacttagccctggcggcagcactggaggacaaagaa
agcctanagacactttacataatctacatgaagcttgcagagatccatgccaactacata
cccgatgctgaactgagtaaaagctacatggaaagagcgcagagcttgaggaaggaactg
gcaggatacacagactcaagtgacacagaagaaacacatcaggacccagctgaggcagag
ccagatactcacaccaaaactggtcagtcaggactccagcagggcaccagtactnctaca
gagtccagcatgacagacaccagcctcacaatcaatgctcaggaagagtctgagcacata
ctactacacacaagtcacaaagaagacatggacactaacatatcggaggaaacagatgcg
gggcctcctgatcaaaccaatccagagactagctgtgctgataatacaaaccacacttgt
caaagcagtttgaaggagggcttgacttttgtattgtga
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