Cyprinus carpio (common carp): 109087046
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Entry
109087046 CDS
T05134
Symbol
itga1
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-1
KO
K06480
integrin alpha 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04810
Regulation of actin cytoskeleton
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109087046 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109087046 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109087046 (itga1)
04810 Regulation of actin cytoskeleton
109087046 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109087046 (itga1)
04515 Cell adhesion molecules [BR:
ccar04515
]
109087046 (itga1)
04090 CD molecules [BR:
ccar04090
]
109087046 (itga1)
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109087046 (itga1)
Cell adhesion molecules [BR:
ccar04515
]
Integrins
Integrin alpha subunits
109087046 (itga1)
CD molecules [BR:
ccar04090
]
Proteins
109087046 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Clathrin
LYRIC
Motif
Other DBs
NCBI-GeneID:
109087046
NCBI-ProteinID:
XP_042588221
Ensembl:
ENSCCRG00000050154
UniProt:
A0A9Q9WSG2
LinkDB
All DBs
Position
B10:complement(7086014..7130872)
Genome browser
AA seq
1184 aa
AA seq
DB search
MLSGVVHFTLAALLALLPWLSCFNVDEKNKMSFSGPVEDLFGYTVQQFENSEGKWVLIGS
PLTGQPAKRTGDVYRCPVGQNKGGVCEKFLLPESTTIPNINEVKENMTMGTTLVVNPDGS
GFLACGPQYGYMCGKQQYITGICSNVSSSFKVLNSIAPTVRECKQDMDIVIVLDGSNSIY
PWYPITDFLVKILKKNHTAPETRVGLMSYGDSVSHNVSLNQFNNKNDLLKEAANILQKKK
SKTNTTLDNNTSKKEAFTAERGARQGVKKVMVVVTDGESHDHYNLKKVIDQCEQDGIERF
AVAVLGDYNRKNKTSEEINNFIVEIESIASEQKSDHFFNVSDEIALVTIVDVLGSKIFAL
EATSENHTSSFEMEMSQSGFSAHTSKAGVMLGAVGAFNWNGTVVMQSGQEFVVPKNNSFH
IPEEQRYEGMAGYVGYDVQSAHTPHGVLYITGAPRFNHSGQVTVYRFDGENVTIIQKLKG
EQIGSYFGSVLQTHDIDRDNYTDILLVGAPMYMGPERDEQGQVYVYKLNESGLFEHEMTL
KPVNQTCCMAHSQNNCKSVNKNEPCGARFGTAIAAVPDLNLDGFNDIVIGSPLENDHRGA
VYIYHGSQKSIKEKYVQRIAAGGDGKSMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALF
WSRDVAELLANMTFDPSKINLQQTCQVQGRTTVCVKTEVCFKYRIKPDKHTNTGTVIRYS
LTLDSLRAIARGRFNETDSRRLQKNESIVDSFCREHTFYTSDRLDFRDPIMVTLEFGLAD
EDSGPVLDGELPTSLNKTIALVDCGNKDKCVADLHLKATANISRLLIKSNQEKFYVNIDI
HNSGDNAYNTKVTLSHTENINYVKVEPKDKDCETNLTRIVCAVGYPFLKIDKKESFKIQF
EANPFYIRKDIVINVTAATDSEELDTALKDNFVSIVIPVKNEANLRFTANKYMKEGHIIF
KEKETIPSVFNHTSVIGDEVKISYMIERNPEMPSPQLLLEIMFPYQTAAKNILLYLTNVS
HTANITCDANGLINPLGIKPDKPYTVNPKKETLSEYLLSCKEKGNPCQLLNCSILPGHIQ
QINTTFRVWRPTFIKGEFSNIYMAVDAKLVIKDTEFVLNDNDKSREVKIQVTKDIRSGIP
LWIIILSILIGLLILALVIFALWKAGFFKRKSVKDMKEDMKESD
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggagtcgttcatttcacactagcagcgcttttggctctgctgccatggttg
tcatgtttcaatgtagacgagaagaacaagatgtcattcagtggaccagtggaggaccta
ttcggatacaccgtccaacaatttgagaacagtgagggaaagtgggttctgattggttct
cctctgactggacagccggctaaacggaccggagacgtctacaggtgccccgttggacaa
aacaaaggaggagtttgtgaaaaattccttttgccagaaagcacaacaattcccaacata
aatgaagtgaaggaaaacatgactatggggacgacgctggtggttaacccagacggcagt
ggctttctggcttgtggtcctcagtacggctacatgtgtggaaagcagcagtacatcact
gggatctgctcaaacgtcagctcctccttcaaagtcctcaactccatcgctccgactgta
cgagagtgcaagcaggatatggacattgtcatagtgttggacggttccaacagcatctac
ccgtggtatcccatcacagactttctggtcaaaatactgaaaaagaaccatactgcacct
gaaacccgagtgggcctcatgtcttatggagacagtgtcagccacaacgtcagcctcaac
cagttcaataacaaaaacgaccttcttaaggaagctgctaatatacttcaaaaaaaaaaa
agcaaaaccaatacaactctcgacaacaatacatcaaagaaagaggcctttacagccgag
cgaggagcaagacaaggggtcaaaaaagtcatggtggtcgtcacagatggcgagtcacat
gaccactacaatttgaaaaaagtcattgatcagtgtgaacaagatgggattgagcggttc
gctgttgctgtccttggtgactataatcgaaaaaataaaaccagtgaagaaataaataac
tttattgtcgaaattgaatccattgctagcgagcaaaaaagtgatcatttcttcaatgtg
tcggatgaaatagcattagtgaccatcgtggatgtcttaggaagcaagatctttgcctta
gaggccacatctgagaatcacacctcctcgtttgagatggaaatgtctcagtcgggattc
agcgctcacacgtctaaagcgggtgtgatgctgggagccgtgggcgctttcaattggaac
gggactgtagtgatgcaatctgggcaagagtttgtcgttcccaaaaacaacagcttccac
atccctgaagagcagagatacgaaggcatggcgggatacgtaggttatgacgtgcagtca
gcgcacacaccccatggggtgctgtacatcaccggtgcaccacgcttcaaccatagcggg
caggtcacggtgtaccgcttcgatggagaaaatgtcaccataatacagaagctgaaagga
gagcagatcggctcctatttcggcagtgttctccagacgcatgatatcgaccgtgacaat
tacactgacatccttctggtcggagctcccatgtatatgggtccagagagggacgaacaa
ggtcaagtctacgtctacaaactcaatgagagcgggctgtttgaacacgagatgacgctg
aagccggtgaatcagacctgctgtatggctcactcccagaacaactgtaagagtgtcaat
aagaacgagccctgcggcgcacgcttcggtaccgccatcgctgccgtccccgacctcaac
ctggacgggttcaatgacatagtgatcggatcacctctggagaacgaccacagaggggcg
gtgtatatttaccacggctctcagaaatcaataaaggagaagtatgtacagcgtattgct
gccggaggagacggaaagagtatgaagttcttcggccaatcgattcacggcatcatggat
ttgaatgatgacggcatcattgacgtcactatcggaggaataggaggagccgcgcttttc
tggtctcgggatgtcgcagagcttcttgccaatatgaccttcgaccctagcaagatcaat
ctgcagcagacctgtcaggttcaagggaggaccacagtatgtgtgaagaccgaagtgtgc
ttcaaatatcgaatcaagcctgacaaacacacgaacacaggaacggtcatcaggtacagt
ttgactcttgactcactgagagcgattgctagaggacggtttaacgaaacggacagcagg
aggctgcagaagaacgagtccatcgtggacagtttttgcagagagcacaccttctacacg
tcggatagactggatttcagagaccccattatggtcacgctggaattcggtttagcggat
gaagactcgggtccagttctagacggggaattaccgacgtcactcaacaagactattgca
ttagtagactgcgggaataaggacaagtgtgttgctgatctacaccttaaagccactgca
aacatctcaagacttctcataaaaagcaaccaggagaagttttatgtcaacatcgacatc
cacaacagcggagacaatgcttacaatactaaggttacactgagccacacggaaaatatc
aactatgtgaaggttgagcccaaagataaagactgtgaaacgaatcttaccagaatagta
tgtgcagttggatatccttttcttaaaattgacaaaaaggaaagcttcaaaatccagttt
gaggccaatcccttctatattcgtaaggacattgtgatcaatgttactgcagccactgat
agtgaggagttagatacagccttgaaagacaactttgtgagcatcgtcatccctgtgaag
aatgaagccaacctgagattcactgcaaacaagtatatgaaggagggccacatcatattt
aaagagaaggagacgatacccagtgttttcaaccacactagtgtgatcggggacgaggtg
aaaatcagctacatgattgagaggaatcctgaaatgccgagtcctcaactgctgctcgag
ataatgtttccatatcaaacagctgccaaaaacattctgctgtacttgacaaatgtcagc
cacacagcgaacatcacatgtgatgccaacggactgattaaccctttaggcattaagcct
gacaagccttatacagtgaatcctaaaaaagagaccttgagtgaatatcttttgagttgc
aaagaaaaaggaaatccctgtcagttgttaaactgctccatcctacctggacacatccag
cagatcaacaccactttcagagtgtggcgacccaccttcatcaaaggagaattttccaac
atttacatggctgtcgatgccaagctggtgatcaaggacacggaatttgtgttaaatgac
aacgacaagagcagagaggtgaagattcaagtcaccaaggacatacgaagtggaatccca
ctatggattataatccttagtattctaataggacttttaattctggcacttgtcatcttt
gctttatggaaggctggattcttcaagagaaaatcagtcaaggacatgaaggaagatatg
aaggaatctgactga
DBGET
integrated database retrieval system
