Cyprinus carpio (common carp): 109087256
Help
Entry
109087256 CDS
T05134
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109087256
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109087256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
HMG_box
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
109087256
NCBI-ProteinID:
XP_042622453
Ensembl:
ENSCCRG00000023550
UniProt:
A0A9Q9YLK0
LinkDB
All DBs
Position
A11:complement(16454175..16487061)
Genome browser
AA seq
2003 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDVPDEDEDGELRRSVPLSPLERFFSEDDSVKQHKKKKPSKI
MEGKEPKVKKKKKKEGLPSGLDDMSDREDHGHRSGSESSTYSNLKKKKKKPKEKKERKTK
QRKKDDDEDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYAFSEDDYKTITNYKAFSQFLRP
LIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVNVAPPICIRS
IQQISPSGPIKKAKTKEGKGPGAKKKSKPVKETKKKGKPKKSKSKAGQSGKRKKGSSSEE
DFLDDFSDFDDISIHSASVRSDTSAAPKKKSTRRGQKKRKIGEDGDGYETDHQDYCEVCQ
QGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEDEDEVVGEE
EDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQK
ILHWVWGDPPLPPEVPLGQDGEKVDGLAKIPLKGRPERQLFVKWAALSYWHCSWVSELQL
ELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRRSKDPQYAAMEERFYRYGIKPEW
MIIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWETDDFDIPYYDSFKQAYWDHRNQVLGE
SHHPLLFRKGKRLKEEIKRREPPPDTPIVDPTIKFEQQPWYIDDTGGTLHPYQLEGLNWL
RFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW
APDFYVVTYTGDKDSRAVIRENEFTFEDSTVKLGRKVFRMKKDTPIKFHVLLTSYELITI
DQAVLGSIAWACLVVDEAHRLKNNQSKFFRILNGYRIYYKLLLTGTPLQNNLEELFHLLN
FLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVE
LSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPN
GSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYERID
GGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAF
SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDD
ILKFGTEELFKDDVEAARTMAGDTKEGEEGSVIHYDDNAISKLLDRSRDATEDTEIQNMN
EYLSSFKVAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQENLARNLGKG
KRIRKQVNYNDASQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDR
DKPLPPLLARVSGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSNWLVRDLRGKSEKEF
RAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKF
STPDLIPVGLELKKLTESVSSDPNTPVPASPVPTQPSTPVPLEKTESVSCSQEDKEITEP
ESTKSLNPEQPVMPEPSPAPEKANDEEEPKSGCPEGNGMEESKKNDTPSVHSEQSSTQAH
PPTKPSEQTANQTPLDCGKGKETSLEKGENKDSPAKIDDKEQKPVSAAIPDDLKSEDPPE
NKLNGEKDARDNTDEFHRDDKNSIKTRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDASHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPSMLSRVPPVSARLQMSERGILSRLTTRGNEPPPQQP
FPQGSFGCSQMYNSSFAGGFRGPGGTAMVNYSQMPLGPYVSVSSNGPPALTSHLEKKSSD
ALRDVATPDLKSGKPSDVICIED
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctaagcaatgaagatgaggggcaagacgatatggattttgaggacgac
gtgccagatgaggatgaggatggtgaacttcggaggagtgtcccgctgtcacccttagag
agatttttctctgaggatgattcagttaaacagcataagaagaagaaacccagcaagata
atggagggaaaggagcccaaagttaagaaaaagaagaaaaaggaggggcttcctagtggg
ctagatgacatgtcagacagagaggatcatggtcacaggtcaggaagtgagagcagcacc
tacagcaacctgaagaagaaaaagaagaagcccaaagagaagaaggagagaaaaactaaa
cagcgaaagaaagacgatgatgaggacgacgatgatgacgatgatggaaacatgaaggaa
ccaaagtcatccagtcagctgatgcaagagtggggtctcgaagatgtgcagtatgccttc
tcagaggacgactataaaaccatcaccaactacaaagccttcagccagtttcttaggccc
ctcattgccaagaagaaccccaagatccccatgtcaaaaatgatgacggtgctcggagcg
aaatggagagagttcagcgcgaacaaccctttcaaaggcacctctgcaactgctgtagcg
gctgccgtggctgctgccgtggaaactgtcaacgtggctccgcccatctgtattagaagt
atccaacagatctctccatctgggccaatcaagaaagccaaaaccaaagagggaaagggg
cctggcgctaaaaaaaaaagcaagccagtgaaagaaacaaaaaagaaagggaaaccgaag
aagtccaaatcgaaagcaggccagagtggaaaaaggaaaaaaggctcttcgagtgaggag
gatttcctggatgacttttcagactttgatgacatcagcattcacagtgcctctgtacgc
tcagatacttcagcggcacccaagaagaagtcaacccgcagaggacagaaaaaaagaaaa
ataggagaggatggagacggctacgagacagaccatcaagactactgtgaggtttgtcag
cagggaggagagatcattctatgtgacacctgtcccagagcatatcacctggtgtgtctg
gatccagaactggagaaagcccctgagggcaaatggagctgcccccactgtgaaaaagaa
ggcattcagtgggaggccaaagatgatgaggaggacgaagatgaggttgttggtgaggag
gaagatgaccacatggagttctgcagagtgtgtaaggatggaggagagctgctgtgctgt
gacacctgcccttcctcctaccacatccactgtctcaacccaccgcttcctgaaattccc
aatggagaatggctgtgtccacgatgcatgtgtccaccactaaaagggaaagtccagaag
attctgcactgggtgtggggcgatcctcctctaccacctgaggttcctcttgggcaagat
ggagagaaggtggacggtttggccaaaataccgctgaagggtcgtccagagaggcagctg
tttgtgaaatgggctgcgctgtcctactggcactgctcctgggtcagcgaactacagttg
gagctatatcacacggtaatgtaccgtaactaccagcgtaagaatgacatggatgaaccg
ccaccgtacgactacggctctggggaggaggagcttaacagtgaaaagaggaggagcaaa
gaccctcagtatgcagccatggaggaacgattctaccgttacggcataaagccggagtgg
atgatcattcatcggatcctcaaccacagttttgataaggacggagatgtacactacctg
attaaatggagagatttgccatatgatcagtgtacctgggagaccgatgacttcgacatc
ccatattatgacagctttaaacaagcctactgggaccacaggaatcaggtgctcggtgaa
agccatcaccccctgctgttcagaaagggaaagagactcaaagaggaaataaagaggaga
gaacctccaccagacactccgattgtggatcccaccatcaagtttgaacagcagccatgg
tacattgatgacacagggggaactttgcacccataccagctggaaggcctgaactggttg
cgattctcttgggcccaaggaaccgacacaatcttggctgatgaaatgggtcttggcaag
actgtgcagactatagtgttcctgtactcactctacaaagagggtcactccaaagggcca
tttctggtcagtgcgccactctctaccatcatcaactgggagagagagtttgagatgtgg
gctccggatttctatgttgtgacttacacaggggacaaagacagcagggctgtcatacgc
gagaatgaatttaccttcgaggacagcaccgtcaaattgggtcgcaaggttttccgcatg
aagaaggacacaccgataaagtttcatgtcctgttgacgtcatatgaactgatcaccatt
gatcaggcagtacttggctccattgcctgggcctgtttggttgtggatgaagcccaccga
ctgaagaataaccagtcaaagtttttcagaattctgaatggctacagaatctactataag
ctgctcttgactggaacccctttgcagaacaatctcgaagagctttttcacctgctcaac
tttcttaccccggagcgcttcaataacctggagggctttctggaggagtttgcggacatc
tcgaaagaggaccagattaagaaactacacgacctgcttgggccacacatgctcaggaga
ctgaaggcagatgtgtttaagaacatgccagcaaaaaccgagctcatagtgcgggtagag
ctcagcccaatgcagaaaaaatactacaagttcattttaacacgtaactttgaggcgttg
aattccaagggaggagggaaccaggtgtctcttcttaacatcatgatggacttgaagaaa
tgttgcaaccatccctacctgtttccagttgctgcagtggaagctccggtcttacccaat
ggttcttatgatggcaacctcctggtgaaatcctcaggaaagctcaccctgcttcagaag
atgctcaaaaaactgaaagatgaagggcacagggttctgatcttctctcagatgacaaag
atgctagacctgctagaggacttccttgagtttgaaggatataaatatgagcgtattgat
gggggcatcacaggggggctgcgacaggaggccattgatcgatttaacgcacccggagct
cagcagttctgttttctgctctccacacgtgctggaggattgggtatcaatctggcaacc
gcagacactgtgatcatatatgactctgactggaacccacacaatgatattcaggcattc
agcagggcacatcgtatcgggcaaaataaaaaggtgatgatctatcgctttgtaactcgg
gcatccgtagaggagcgtattacccaggtggccaagcgaaagatgatgctgacccacctg
gtggtgcgccctggcttgggctcgaagaccggctccatgtccaaacaggaacttgacgac
atcctcaagtttggcactgaggagctgtttaaagacgatgtggaagccgccagaacaatg
gcaggagatactaaagaaggagaagagggcagtgtgatccactatgatgataatgccatt
tccaagctgctggaccgtagccgggatgccaccgaagacacagagatccagaacatgaac
gagtacctgagctcatttaaggtggctcagtatgtggtgagagaggaggatggagaggag
gaggtccagagggagattattaagcaggaagagaatgttgatccagactactgggagaag
ctcttgaggcaccattacgagcagcagcaggagaatctggcccggaacctgggcaaaggg
aaacgtatccgcaaacaggtcaactataatgatgcctctcaggaggaccaagagtggcag
gacgatctttcagataatcagtctgagtactctgttgggtccgaggatgaggatgaagat
ttcgaggaacgtcctgaaggaggacgcagacaatctcgaaggcagttgaagagcgatcgg
gataaaccattgccgccgttgctggctagagttagtggtaatatagaggttttgggattt
aacgcccggcagcggaaagcattcctgaatgcgattatgcgctggggtatgcccccacaa
gatgccttcaactctaactggctggtccgtgacctgcgagggaaaagtgagaaggagttc
agggcttatgtatctctgttcatgaggcacctatgtgagccaggggcagatggagcagaa
acatttgcagatggggtcccgagggaaggcctgtcccgccaacatgttctcacccggatt
ggtgtcatgtctctggtccgcaagaaggttcaggagtttgagcatgtgaatgggaagttt
agtacaccagatttgattcctgtaggattggagctgaaaaaacttactgaaagtgtgtcg
tctgaccccaacacacctgttcctgccagtccagttccgactcaacccagcacacctgtt
cctttagaaaagacagagtcagtgtcttgttctcaagaagacaaggagattacagaacca
gagagcaccaaatcgctgaaccctgagcagccagttatgccagaaccctcccctgcccca
gagaaagctaatgatgaagaagaaccaaaaagcggatgtcctgaaggaaatggaatggaa
gagagcaagaagaatgataccccttctgtccattcagagcaatcgtccactcaagcacat
ccgcccacaaaacctagtgagcagacagccaatcagacaccattagactgtggtaaaggg
aaagaaacttctctggagaaaggggaaaataaagacagcccagcaaagatagatgataag
gagcaaaaaccagtttctgcagccattcctgatgatttaaaatctgaagacccccctgag
aacaaactgaatggagagaaagacgcaagggacaacacggacgagttccacagagatgac
aagaacagcatcaagactcggttcatgtttaacatcgcagatggtggattcacagaatta
cacacgctgtggcaaaacgaggaacgtgcagctgtatcatctgggaaaatgtacgacatc
tggcaccgtcgccatgactactggctgctggctggcattgtaacacatggctatgcccgg
tggcaggacattcagaatgacccacggtatgccatcctcaatgagcctttcaagactgaa
atgcacaaagggaactacttagaaatgaagaataaatttctcgccagacgttttaagctc
ctggaacaggctttggtaattgaggagcagctacggcgcgccgcatacctgaatatgact
caggatgccagtcaccctgccatggccctcaacacacgtttcgcagaggtggagtgcctg
gctgagtcccatcagcacctctccaaagagtcacttgctggtaacaagccagccaatgct
gtgctgcacaaagtgttgaatcagctggaggagctgttaagcgatatgaaggctgacgtg
acgcggttgccctccatgctttcgagggtcccaccggtctctgcccggctccagatgtca
gagcggggcatccttagcaggctcaccacccggggcaacgagccgccacctcagcagcct
ttccctcagggctctttcggctgttctcagatgtataatagcagttttgccggaggtttc
cgtggacctggaggcacagcgatggtgaactacagccagatgcccctggggccatacgtc
agcgtgtcctcaaacggacctccggccctcaccagccaccttgagaagaagtccagtgat
gctctgcgagatgtggccacccctgatctgaaatcaggcaaacctagcgatgttatatgc
attgaggactag
DBGET
integrated database retrieval system
