Cyprinus carpio (common carp): 109087272
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Entry
109087272 CDS
T05134
Symbol
vps8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109087272 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109087272 (vps8)
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109087272 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Motif
Other DBs
NCBI-GeneID:
109087272
NCBI-ProteinID:
XP_042572303
UniProt:
A0A9Q9ZSL4
LinkDB
All DBs
Position
B1:6490218..6625080
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AA seq
1414 aa
AA seq
DB search
MAESPDSRSLVSASSQLNLMEIEAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFILEDT
CILNTENIDAHSCETSSLASSDSGDRTHLKRRRKAVETNATVHGSVLRRNVLKGISAQMV
SAADKVDAGLPTAITVSNVIAVGTSHGLALVFGKDQNQALRLCLGTTATGAEYGAVSALS
INHDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDHPALAVCNDSGG
SVFELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAGPELKDHPITHYSLLAMASLTKI
LLIGLKPSLKVWMTFPYGKTDPASVPLLAWQFVAAQKTINPVLAFCRGNTIHFLLVKKDE
SGTIHVIKQRQLQLNCDFISLSWINPRTLVLMDSTEKLRVVDRPSQEELETVDMAELQLV
YNSSHFKLLATGXNVSQALALVGEKTCYQSVCSYAGQIMYLGTKSVHIMTLRNWHERVDH
LLKQEKFMEALSLAWSFHEGTAKAVLGLFAEPAKRKGVVAEKMVEILLQYVDRSLKKCPE
QGKIQVMEQHFQDMVPIMVDYCLLLQRKDLLFNQIYPRLVENSVARGVFLESLEPYILSE
RIGCLTAPVMRDLLSYFQENGMMDSVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVF
NSGMNDYISPMEKLFQAIGPPLREGKPLTDEHVVMGNKLLVYISCCLAGRAYPLGDIPED
LVPQVKNQVFEFLIRLHSVEAAQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQAL
EYQQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSP
DDDSRHTERQQVLLELLQVGGVVQFDEGHLLDLAEKAEFYQICEFMYDRKHLYDKIVDCY
LKDPLRKEELFNYIHNILSMPGYSSEEKQLVWVKALQHIKDLVSINSAKTAELVAVHFAD
KVQSVITSLQDDYLAFQFLKCLLNPSSRESLNPQTVLKLGPDLHELLVDLLCQFSPQQVT
AFLKTSQDYRLEDAVQITEKHKLHEATAYLLEKKGDVQGAFEVLLQTLKGKLHKLALEGS
EADKPDGEEEETGDEVPSLLQRVEEALHDIIALCQRSSHGLNQQQREALWFPLLEAMMSP
QKLLKGADTKHTSEALKELTMKVLNSMSSFIAPPAIIQRILKDPVYGKGKLAEIQGLILG
MLETFNYEQTLLETTTNLLNSDLHWSLSHLRKAVSRGLHPRQDHCNICLQQYKRRQESEE
EIIIFSCGHLYHCQCLQRKEVGVLSERQYSWSCYKCTSNQGSRPADRPSTESSRSHSASL
AQTKVMSAHRGIVAEAHGRKMLTEATLDAQQTQAWDHFRTLYRGPSRLAVLTELTHSHGN
ERAGLSNPVHPGTGSIYHSENFQLKLSPPPLVEE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctccggacagtcgcagtcttgtttctgcgtcctcacagctcaatttaatg
gaaatagaggcgattgatgataaagagtttgacatccctcaagtggacacgcctccgacc
ctagagagcatcctgaatgagcctgaagatgaagatgagccattcattctggaggacact
tgtattttgaacacagagaacattgatgcccactcgtgtgaaacctcgtctctggccagc
tctgacagtggagaccgcacacatttaaagaggaggaggaaagcagtggaaactaatgct
acagtacatggatctgttcttagacgcaatgtgctgaaaggcatctcagctcagatggta
tcagctgcggataaagttgatgctggcttgccaacggcaataactgtttcaaatgtgatc
gctgtagggacgtcacatggtctggccttagtatttggaaaagatcagaaccaggctctg
cgtctctgtcttggcaccacagcgacaggagcggagtatggggcagtgtcagctctcagt
attaatcacgattgcacacgactgctttgtggctttgccaaaggacagatcaccatgtgg
gatctggccaatgggaagctgctccgcactatcactgatgcccatccacctggcactgcc
atactacatgtgaagttcactgaccacccggcactagctgtgtgtaatgacagtggcgga
tctgtgtttgagctgtcatttaggagggtaatggggatgaggacatgtgaatccaggtgt
ttgttcagtggttctaaaggtgaggtttgctgtgttgagcctctacatgctggacctgaa
ctgaaagatcatcccattacccactactccctgctggccatggcctcactcaccaagatt
ctgctgataggactgaagccttcgctcaaagtgtggatgacttttccctacggcaagacg
gatcctgcgagtgttcccttgttggcttggcagtttgtggcagcacagaaaacaatcaac
cccgtcctggccttctgtagaggaaacaccatccacttcctgctggttaaaaaggatgag
tctggcaccatccatgtcatcaaacagagacagcttcaactcaactgtgacttcatcagt
ctgagctggataaacccccgcacgcttgtgttaatggacagcacagagaagctgcgagtg
gtggacaggcccagtcaggaggaactggagacggtggacatggccgagctgcagctggtt
tataacagcagccattttaaattgcttgctaccggatgaaatgtcagccaagcactggct
ctagttggagagaagacatgttatcagtctgtttgcagctatgcaggccagatcatgtat
ctgggaacaaagtctgtgcacatcatgaccctgaggaactggcatgagcgtgtggaccat
ctgttgaagcaggagaagttcatggaggctctgtctcttgcctggtccttccacgagggc
accgccaaagctgtgctaggtctatttgcagagcctgctaagagaaaaggtgtggttgca
gagaagatggtggaaattttgttacagtatgtggatcgctctctgaaaaaatgtccagag
caagggaaaatccaggtgatggagcaacacttccaggacatggttcctatcatggtggat
tattgtctccttctgcaaagaaaggatctgctgtttaaccagatctaccctcgactggtg
gagaactcagtggccaggggagtgtttctggagagtctggagccttacattctgagtgag
aggattggatgtctgactgcacctgtcatgagagacctcctcagctacttccaagagaat
ggcatgatggatagtgtggaaggatgcctggtccacatggacatcaccaatctggacata
caacaggtggtgcagatgtgctgggataaccagctgtatgatgccatgatctacgtcttc
aacagtggcatgaacgactacatcagccccatggagaaactctttcaggcaattggtcct
cctctccgtgaaggaaagcctctcacagatgagcatgttgtgatgggaaataaactgctg
gtgtacatcagctgttgtttggcaggacgggcctatccgttaggtgacattcctgaagat
ctggtccctcaggtgaaaaaccaggtgtttgagtttctcattcgtctgcactcggtggag
gctgcacaggaagaggaagtgtatccatacattcgaactcttctgcacttcgacactcga
gagttcctcaacgtcctggcgctgacatttgaggacttcaagaatgacaaacaggctctg
gagtatcagcaacggattgtggacattttactgaaggttatggtggacaattctgacttc
accccgtctcaagtcggctgtcttttcaccttcctggcacgacaacttgccaaacctgat
aataccctctttgttaaccggaagctgtttgaccaggttctagagtttctatgtagtcca
gatgatgactctagacatacagaaagacagcaggttctgctggagctgctgcaggttggt
ggcgtggtccagtttgatgaggggcatctccttgaccttgcagagaaggcagaattttat
cagatctgtgagtttatgtatgacagaaagcacctttacgacaaaattgttgactgctac
ctgaaagaccctttgagaaaggaggagctcttcaactacatccataacatcctgtccatg
ccaggctacagctcagaggagaaacagttggtgtgggtcaaagcccttcaacacatcaag
gatctggtcagcattaactcagctaagacagcagagctagttgcagtgcactttgcagac
aaggtgcagtctgtcatcacatctctgcaggacgactatttggcgttccagtttctgaag
tgcctcctgaaccccagctccagagaaagtctgaatcctcagactgtcttgaagttgggt
ccagatcttcatgagctcttagtggacctactgtgccagttcagtcctcagcaagtcacc
gccttccttaagacctctcaggactaccgactggaggatgccgttcagatcacagagaaa
cacaagctgcatgaggccacagcctacctgctggagaagaagggagatgtgcaaggagct
tttgaagtgctgctacagaccctgaagggcaaactccacaaacttgccctggaaggctca
gaggcagacaagcctgatggtgaggaggaggaaacaggtgatgaagtgccgagtctgtta
caaagagtggaggaagctctgcatgacatcattgctttgtgtcagaggagctcgcacggt
ctcaaccagcagcagagagaggctctgtggtttcctctcctcgaggcgatgatgtcacca
cagaaactactcaaaggagccgacaccaaacacacttcagaggcattaaaagagctcact
atgaaagtcttaaacagcatgtccagttttatcgccccacctgccatcattcagcgcatc
cttaaggaccctgtgtatgggaaaggaaagctggctgagattcagggactcattttaggg
atgctagagaccttcaactatgaacagacattgttggagactaccacaaatctgttgaac
tcagatcttcactggtctctgtcacacctgcgtaaggcagtcagtagagggcttcaccca
agacaggaccactgcaacatctgcttacagcagtacaagagacgccaggagagcgaggag
gagatcattatctttagctgtggacacctgtaccactgccagtgtcttcagcgtaaagaa
gtgggtgttttaagcgagaggcagtactcatggagctgctacaaatgcacatccaaccag
ggctcacggccagcggacagacccagtacagagagctctcgatcacactctgcttctctg
gcacagaccaaagtgatgtctgctcatcgtgggattgttgcagaggctcatgggagaaag
atgttgactgaagccactctggatgcccagcagactcaggcctgggatcatttccgcact
ctctacagaggaccatctaggcttgctgttctgacagaactcactcattctcatggcaat
gagagggccggtctgtcgaaccctgtccatccaggaacaggaagtatttatcacagcgag
aatttccagctaaagctttctcctcctccactggtggaggagtag
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