Cyprinus carpio (common carp): 109087386 Help Entry 109087386         CDS       T05134                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism ccar  Cyprinus carpio (common carp) Pathway ccar03440   Homologous recombination ccar03450   Non-homologous end-joining ccar04218   Cellular senescence Brite KEGG Orthology (KO) [BR:ccar00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     109087386    03450 Non-homologous end-joining     109087386  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     109087386  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ccar03032]     109087386    03400 DNA repair and recombination proteins [BR:ccar03400]     109087386 DNA replication proteins [BR:ccar03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     109087386 DNA repair and recombination proteins [BR:ccar03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      109087386     BRCA1-C complex      109087386    NHEJ (non-homologous end-joining)     MRX complex      109087386 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ATG17_like ABC_tran AAA_29 Intein_splicing AAA_13 AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  109087386 NCBI-ProteinID:  XP_042620324 Ensembl:  ENSCCRG00000046555 UniProt:  A0A9Q9YHI2 LinkDB All DBs Position A9:complement(28999859..29030306) Genome browser AA seq 1312 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTVLVGPNGAGKTTIIECLKYITSGDFPPG SKGSTFVHDPKDAHETDVRAQIRLQFRDVNGDPVAVQRSMQSTQKGKKTEFKTLEGVITR FKHGEKVGLSSKCAEMDREMISALGVSKAVISHVIFCHQEDSNWPLSEGKALKQKFDDIF SATRYIKVLETLRALRMKQASIIKTCQTELKYLKQNKDKAQEIKELLSTKETQLASSKES VQRIESQIDPLENRMYDIDSSLSKVMKLDNDIKALDSRKKQMEDDNRELEEKMEQVFQGT DDQLQDMYQNHQRTVKEKERRLTECQRDLERAGRECQRTNRIKSDLLVEQGRLQLEADRH TQNIKKRDTQVKSLASFLELEGYERTPLNERQLQSFHRQVKERLDQDTEALNQTMHEMQE KEAQKQQSIDDLRDKKTGLERTIELKRDIQAKKQQELKNIKSDLQRLEGSSSRLQELETE LQKAERELDNAVQACTVDSLKAEVVELQKEKTELDQAQRKLDQEMELLNTHTAARTQMDM LKKTKMEKEEQVRKIKSRHNEELVSLMGHFPSKKELEDWIYSKSKEINSTRDRLNKMNKE LASGEQKKSHFTAEVKRKEEQLASYEERLFNVCGSQDFESDLNKLEDDLEKCSKQRAMLA GATAVYSQFISQLTEEGEPCCPVCQRVFPSEAELQDVINDMQSKLRLVPDKLKNTEHDLK RKERRRDEMMELKPIRQSIAELQEKELPELRNKLQRVNRDIEKLKGDTEEQETLLGTLMS EEDTAKACLQDISLMDRFQLDLKDVERKIAQHAARLQGVDLSRTMQQVSQEKQETQHRLD TTCSKIELKRKLIQDQQEQIQAFRSSVNEIRGEKLQISSNMQKRQQLEEQCVEFSTEIQT LHRDIRDAKEQVSPLAATLEKLQQEKQDLAERRRQKQEEGQEKINGIKEKVKNVTLLERE ITKYIEEGKDSYKEQKETELQEVDKQLHEAEKQREKINKDIGNIRQDIDTQKVQERWLQD NLTLRKRMEELKEVSRKREDLVKEMGNMQVLQLRNERREVERKLEDLKKNRSVALGRQKG YEDEILRFRKELSEDQYCRAEDLYRDQMIVMRTTELANKDLDIYYKALDQTIMKFHSMKM EEINKIIRDLWRSTYRGQDIEYVEIRSDVDENTSAGLKRRTYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLVITHDEDFVELLGRSNYVEHFYRIRKNQDQCSEITKCNINTLNSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtctaagatcgaaaagatgagcatcctgggagtaaggagttttggagttgaggataaa gacaaacaagtgatcaccttcttcagccctctgacggtccttgtgggacctaatggagct ggaaaaacgaccatcattgaatgtctcaagtacatcacttcgggagactttccaccagga agtaaaggaagcacattcgtccatgatcccaaagatgcccatgagacggatgtacgggca cagatcagactccagtttagagacgtgaatggcgatcctgtggctgtccagaggtctatg caaagcacacagaagggcaagaaaactgagttcaaaacccttgagggtgtcatcacaaga ttcaagcacggagagaaagtgggcctgagctctaaatgtgctgaaatggaccgtgagatg atctcagcactgggcgtctccaaggctgttatcagccatgtcatcttctgccaccaagag gactccaactggcctctcagtgaaggaaaagccctcaagcagaagtttgatgacattttc tcagccacaaggtacattaaggtattggagaccctgcgggcactgaggatgaagcaggcc agcattatcaaaacctgccagacggagctcaagtacctgaaacagaataaagataaagcc caagagattaaagagcttctgtccactaaagagactcagttggcttcctctaaagaaagt gtccaacgcattgagagtcagatagacccactggagaatcgaatgtatgacatagacagt agcctcagcaaagtaatgaagttggataatgacatcaaagctttggacagcaggaagaaa cagatggaggatgataaccgggaactcgaggaaaagatggaacaggtgttccagggcaca gatgatcagctgcaggacatgtatcagaaccaccagagaacggtgaaggagaaggaacgg agacttacggagtgccagcgtgatcttgaacgtgccggccgagagtgccagaggacgaac cgcataaaatctgacctgctagttgagcaaggccgtctgcagttggaggcagatagacac acacaaaacattaaaaagagggacacccaggtcaaaagtttagcgtctttcctggagttg gagggttatgaacggacccctcttaatgagcgacagctccagagcttccacagacaagtc aaagagagactggaccaggacacagaggcccttaaccaaactatgcatgaaatgcaggag aaagaggcacagaagcagcaaagcatcgatgatctccgagataaaaagacaggtctagag agaaccattgagctgaagagagacatacaggccaagaaacaacaggaactgaaaaacata aagtctgacctccaaagactggagggctcctcaagcagactacaggagctagaaactgaa cttcagaaagcggagcgtgagcttgataatgctgtacaggcctgtacggtggacagtcta aaggcagaggtagttgaactacagaaggagaaaactgaactggatcaggcccagcgcaag ctagaccaggagatggaattgctcaacacacacaccgcggcacgcacacagatggacatg ctgaagaagaccaagatggaaaaagaagagcaggtgaggaagatcaagtcgaggcataat gaagagctggtgtctctgatgggacacttcccaagcaagaaagagctagaagactggatc tactccaaatccaaagagatcaactccaccagagaccggctcaacaaaatgaataaggag cttgcatctggagaacagaagaagtctcactttactgctgaagtcaaacgtaaggaagag cagctggccagctatgaagagagactttttaatgtgtgcggcagtcaggactttgagtcg gacttgaacaaactggaggatgatttggagaagtgctccaaacagagagctatgctggcg ggtgccacagccgtgtacagtcagttcatcagtcagctgacggaggagggtgagccctgc tgtcccgtgtgtcagcgtgtgttcccgtcggaggcagagctccaggacgtcattaatgac atgcagtccaagctgcggctcgtcccagacaaactaaagaacactgagcatgacctgaag aggaaggagcgcaggcgtgatgaaatgatggaactgaagcccatcaggcagtccatagcg gagctccaggagaaagagctgccagagctcagaaataaactccagcgtgtgaatcgagac attgagaagctgaaaggagacactgaggagcaagagacactgctgggcacactgatgtct gaggaagacacagctaaggcctgtctgcaggacatatcactcatggatcgctttcagctt gacctgaaggatgtagaaaggaagattgctcaacatgcagccaggctgcagggagttgac ctcagccgcaccatgcagcaggtcagccaggagaagcaagagacccaacaccgcctggac accacctgcagtaagatcgagctgaagaggaaactgatccaggaccagcaggagcagatc caggccttcaggagcagcgtaaatgagattcgtggagaaaagctccagatctccagcaat atgcagaaacgtcaacagttggaggagcagtgtgtggagttctccactgagatccaaaca ctacacagagacattcgagatgcaaaggagcaggtgtctcctctagctgccactctggag aagctccagcaggagaaacaggaccttgctgagcgcaggagacagaaacaggaggaagga caggaaaagataaacggaatcaaggaaaaagttaaaaacgtgaccctccttgaaagagag attaccaagtacatagaagagggcaaggacagctacaaagagcaaaaagaaactgagcta caagaggtggataaacaactacacgaggctgaaaaacagcgagagaagatcaataaagac attggcaacattcgacaagatattgatactcagaaggttcaagagcgctggctacaggac aacttgactttacgaaagcgtatggaggagctgaaagaggtgtccaggaagcgtgaagac ttggtcaaggagatgggcaacatgcaagttctgcaactgcgcaatgagcggcgagaagtg gaacgaaagttggaggacctaaaaaagaaccgcagtgtggctctcggtcgacagaaaggc tacgaagacgagatcctccgttttcgtaaagagctcagtgaggatcaatattgccgggcc gaggatctctacagagaccaaatgattgtgatgagaacaacagagttggccaataaggac ctggacatctactataaagccctagaccaaacaataatgaagtttcacagcatgaagatg gaggagattaataaaatcatcagagatttatggcggagcacatacagaggacaagacatc gagtatgtggagatacgctctgatgtggatgagaacacctccgccggcctgaaaagaagg acctataactatagagtggtaatggtcaaaggagacactgctttggacatgcgtggacgg tgcagtgctggacaaaaggtccttgcctctctcataatacggttggctctggctgagacc ttttgtctgaactgtgggattctggctctggatgagcccaccaccaacctagacagagag aatatagagtctttggcacacgcactggtggagataattaagagtcgctctcgtcaacgc aacttccagctccttgttatcacccacgacgaggattttgtggagctcctgggacgatcc aactatgtggagcatttctacaggatcaggaagaaccaggaccagtgctcagagatcacc aagtgtaacattaacactctgaactcctacctgcactga

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