Cyprinus carpio (common carp): 109087399
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Entry
109087399 CDS
T05134
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109087399 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109087399 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109087399 (pdlim3b)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109087399
NCBI-ProteinID:
XP_042594480
Ensembl:
ENSCCRG00000047676
UniProt:
A0A9Q9X3C6
LinkDB
All DBs
Position
B14:21103611..21114590
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AA seq
336 aa
AA seq
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MPQNVVLDGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILAIQGASTDGM
THAEAQNKIKDSTNQLFLKIERPETKMWSPQVIEEGKVNPFKINLEAEKQDIDYFEHKFN
VRPKPFTSASQTSDITSQTLIGNVAQMSGTPSDGSRAALSAQYNSPIALYSADNVSNTLQ
QAQMSTVVRQALPSPTPLTSIEDSHVYRMLQDNQEQSHEPRQSGSFKALQDYVESDGTRP
MVTRSVKAPVTKPQAATSSLQKLPLCDKCGTGIVGPVVKARDKYRHPACFVCSDCGLNLK
QKGYFFVEGQMYCEAHARMRMTPPKGHDLVTVYPTA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaacgtggtgctggacgggccagccccttggggatttcggctttcaggaggc
aaagattttaaccagccgctgaccataactcgggtgacaccaggcagcaaggcatctcgg
gtcaacctgtgcccaggagacatcatcctggccatccagggagcgtccactgatggtatg
actcacgctgaagctcagaacaagatcaaagactccaccaatcagcttttcctcaagata
gagaggccagaaacaaaaatgtggtcacctcaggttatagaagaggggaaagtgaaccca
ttcaaaatcaatttggaggcagagaagcaagacattgattacttcgaacacaagtttaat
gtcagaccaaagcccttcacatctgcaagccaaacgagtgacatcacatcccagacgctg
atcggaaatgtagctcaaatgtctggcaccccgtcggatgggtccagggcagctctttct
gcacagtataactccccaattgcattatactcagcagacaatgtctcaaatacactgcag
caggctcagatgtcaactgtagtcaggcaggcattgcccagccctacacccctgacgtct
attgaagactctcatgtgtaccgtatgctccaggacaaccaagagcagtcacatgaacca
cgtcagtctggatcattcaaggccctgcaagactatgtggagagcgatggcacaaggccc
atggtgactagaagtgtaaaagccccagtgacaaagccccaagccgccacatcctcactc
cagaagctgcctctctgtgataaatgtggcactggcattgttggaccggtggtgaaagct
cgggacaagtaccgccatccagcctgtttcgtgtgctcagactgcggcttgaacttgaag
cagaaaggctacttttttgtggagggacagatgtactgtgaagcccatgctcgaatgcga
atgaccccacctaagggacatgatctagtcactgtatatcctactgcttag
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