Cyprinus carpio (common carp): 109087507 Help Entry 109087507         CDS       T05134                                  Symbol focad Name (RefSeq) focadhesin isoform X1   KO K27498   focadhesin Organism ccar  Cyprinus carpio (common carp) Brite KEGG Orthology (KO) [BR:ccar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccar03019]     109087507 (focad) Messenger RNA biogenesis [BR:ccar03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      109087507 (focad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Focadhesin DUF3730 HEAT Motif Other DBs NCBI-GeneID:  109087507 NCBI-ProteinID:  XP_042615557 UniProt:  A0A9Q9Y8F6 LinkDB All DBs Position A7:11207805..11255805 Genome browser AA seq 1818 aa AA seqDB search MTEILKTRFEFPSSLIQAQAVRTLVTAVLKEKGQIERICQTTAKGQALESLWEQCSSDST VVRSACCDALVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDNGA SFTCPYSIRTFPHPYITVLENRPDCWPALLQEIDDFLQLAKDKDEPVYVEMLVPFLRYLY CEPQRLSENALLRHSLLRVLLQPRGVPEADSLQEKGASGTRVVRELIHSLFDLLPYMLVD SVTAVVEFSSFAESLTSALLIDPGFWRKELTQMALQLLCACQLSLHLGGELMSLLHTLHQ IIPAHAEELPPEQVIMGISLLLLSASTSQQTALLELAVKIVPPELPPPWGASLLVMPLLQ VLSCSSLMEALTDMQTHTKNLELTNSLLQTVQREPSNRKEDSTQLSLPLSTWYSELQVAT SVLHRISIDSIASMEWLYSLQSSLSVCEHVPESVCLLVSHVIVSSHGDLCRLALDTAAAV AEADPAKVPCLLPVLMFKLGRVSDPALSHSVLYTLPKLGTHKFCIPQVLHVLQTLGSSSR LRPVALRLLALLWIKQDRVYPDLQRLMSQLEKSSVVLGKDTQWEQILARAACIRDICRER PYQHGGDMLAAITDTLMQFSRKDQATPAALALEGLQELCRAEVVDIISTWKALSPKLCCD TRPLVLKATAELLALVPALNVKSEEYEARDHQPLFLIDKFRNEAVCVLWGYALSQVPEVA SQGFKALSEYPEPSHTILHLPEQARPPPKQPEEEDEGKENEDDKDEDVSVPGTSYVKLVC LTPRSVLPALETFLTALVRQEMNQMPRGVYHSALIGGNLRSDQGKTVSGIPSFMLKTYEK NKQPGLKPGLAAGLLLCYDLPVQTDKDGHPITRFLVSRGRSYQQMLATLIHEVNIQPSEW HRSLLLPQAWRGFMSRAYHAALKGRKAELEMLQKQGKENPEELQYKQHYAWLWVRDQLTD VVKSAAKDSPVVQGNSILALSGLAVVLTRYESNLPTQSESGLEVGSDFLPTVHWLTMVID TLLSIVSSNSNPKGQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVTSCKKNIPA ILGTLAAGLPGSPSADESQALQFHSGLALGMFLAWLHDERISDISGLSVAELLVKHLERL EDCCFNPNLEYNAGCVLGVGLVLSSLSSSSQSERDGVHVSLTLDRLLQTLQDSSNMSRML QEVLAYSVACVAVSAFSAGIIEASKAEESMNTLRTLTEESQQTPGFALALGLTVFGLSSF GHGKAVDIQPRLLAAWTKILLAEGCPTMQRLSALNGLIALVGSEMALIQLKSESEESSQQ QGRLNEVIRAITQIITFSGTIGLQSNGACLLGHLHLAHISSSHSRTAVPQDFGYLSEKSV IRASVDFITEAGRKGPEFTPPHLVKTVLAALVTVGGSFQYPPVNWNAILSPLMRLGFGEE VQHHCLELAASQAQSSQSASLFLGIWLVPPLVHSLSLRARASLYECLSSWMKHVAEDKLQ VYVDSLAVQQFVPDTRPQRLPLCLCILSGLSKAMAVPNPPQNCWTALSSTTEKIYNLLPD NIPAGEVDLYEAMCSCLSELSDTEIDRIVKVTEANVEKTAFILSYLTSKGRVPLLGLNDV ISTILQAGNKKRISWLLLQTLHQSRFASSPNTGVSKRMEWLLELMGHIRNVAYGSPSVKC VSVVEGTDFLLGVFAAAVVSWADHCVPLLIGIRAQWFPWQQSSLTTELSHDLYVNPAITE LSVTSCLLAIPCSMKKLLAKEPWKSQSQKFIDWLFSITEGPKLGFSETALLTAKATLMAL RSSSEFKKKGVWTRAYGW NT seq 5457 nt NT seq  +upstreamnt  +downstreamnt atgactgaaattttgaagaccaggtttgagttccccagctccctcattcaagcccaggct gtgaggacgctggtcactgcggtgctgaaagagaaaggccaaattgaaaggatttgtcag accactgctaaaggtcaagcgctggagtctctgtgggagcagtgcagcagtgacagtacc gtcgtccgctcggcttgctgtgatgctctggtgctactcgtagaacagggacatgcagat ctgccatatgtgctcaacaccacccttaacctcctgccctcggcacggaatgttcaaggg ctgatcaaagtggtcgggaggctgctacagatccaggcaagtcagcgggataacggagca agcttcacctgtccatattcaattaggaccttccctcacccctacatcacagtgctggaa aaccgtcctgactgctggcctgctctgctccaggaaattgatgactttcttcagctggct aaggacaaagatgagccagtatatgtggaaatgctggtaccattccttcgttacctgtac tgcgagccccagaggttgtcagaaaacgctctgcttagacacagcctcctcagggtcctg ctccagccacgaggggttcctgaggctgacagcttgcaggaaaagggggcgtctggcact cgggtggtccgtgagctaatacacagcctctttgacctgcttccatacatgctggtggac agtgttactgcagtggttgagttcagctcatttgctgaatctctgacatcggctctgctc atcgatccaggcttctggagaaaggaactgactcagatggctcttcagctcttgtgtgcc tgtcagctgagtcttcatctgggaggagaactgatgtctctccttcacacactccaccag ataatacctgcacatgcagaggaactcccgcctgagcaagtgatcatgggaatctccctg ctactgctaagtgcctccacctctcaacaaactgccctcctagagctcgctgtaaagatt gtccctcctgagcttccacctccttggggtgcatctttgctggtgatgcccttgttacag gtgctgtcctgctccagcctcatggaagccctgacagacatgcagacacacacaaaaaac cttgaattgaccaattcactgttgcaaacggttcaaagagagccctcaaatcgaaaagag gactccacacagctgagtttgcctctcagcacttggtacagcgagctgcaagtggccacc agcgtcctacaccgaatttccatagactccattgcatccatggaatggctttactccctg cagtcatcactctctgtctgtgaacatgtcccagaaagtgtttgtctcctggtgtcccat gttatcgtcagcagtcacggggacctctgcaggttagcgctggacactgctgctgccgtc gctgaggccgatcctgctaaggtgccatgtttacttcctgtcctgatgtttaaactgggc agagtgtctgatccggctttgtctcactctgttctctatactctgccaaaactgggaacc cacaagttctgtatcccacaggtgcttcatgtcctccaaactctgggcagttcatccaga ctgaggcctgtggctctgcgcctcttagcacttttatggataaaacaggaccgtgtgtat ccggacctgcagagactgatgtcacagcttgaaaaatcctcagtggtcttgggaaaagat acgcaatgggagcagatattggccagagcagcctgcatcagagacatctgcagagagagg ccgtaccagcatggaggagacatgctggctgccatcaccgacacactgatgcagttctcc aggaaggatcaggccactcctgctgctctggcactggagggcttacaggagctctgtaga gctgaggtagttgatatcatctccacctggaaggcactctctcctaagctgtgctgtgac accagacccctggtcctaaaggccacagctgaacttctggcattagtacctgctttaaac gtcaaaagtgaagaatacgaggcacgagaccaccaacccctgtttcttattgataaattc agaaacgaggcagtctgtgttttatggggctacgcacttagtcaggtcccagaggttgca agccagggttttaaagctctctctgagtaccctgaaccatctcacaccatcctacacttg ccagagcaggccagacctccaccaaagcagcctgaagaagaggatgaagggaaggaaaat gaagatgataaggatgaagatgtttcagtgccagggacctcatatgtgaagctagtttgt ctcacaccacgatctgttttaccagccctcgagaccttcctaacagctctagtaaggcag gagatgaaccaaatgccccgtggcgtgtaccattcagctctgattggggggaatttgcgc tctgaccagggaaaaactgtatctggaattccttcttttatgctgaaaacatatgaaaag aacaagcagccgggtctgaaacctggcttagcagctgggcttctactctgttatgacctt cctgttcaaactgacaaagatggacatccaatcacacgctttcttgtcagcagagggcgg agttatcaacaaatgttagccacccttattcatgaggtgaacatccagccgtctgaatgg catcgttctctgctcttgccccaggcctggcggggcttcatgagccgggcttaccatgca gctctcaagggtcgaaaggcagagctggagatgctgcagaagcagggtaaagagaaccca gaggaactgcagtacaaacagcactatgcctggctctgggtcagagaccaactgactgat gtggtcaaatctgccgccaaagatagtccggttgttcaaggcaattctatcctggcactt agtggcctggctgttgtcttaaccagatatgagagcaaccttcctacgcagtctgaaagt ggacttgaggtgggttcggacttccttcccacagttcactggctgacgatggtgattgac acactgctcagcattgttagcagtaacagtaaccctaaaggacaagtcttcccatggttc attcatcgctcatattcgggtgagaacacagcgagtgtgatcgcgcgctcctgtgctgct ctgggtctggcgttgttggtgccggtgctggtgacctcgtgcaaaaagaacattcctgct atactgggcacgctagcagcgggactgccgggctcgccctccgcagacgaatctcaggca cttcagtttcacagcggcttggctctgggcatgtttctagcctggctgcatgatgagaga atcagtgatatatctgggctgtcagtagcagagctgcttgtgaaacatctggagcgactg gaagattgttgctttaatcccaatctggagtacaatgctggttgtgtgttaggtgttggg ttggtactcagttctctcagtagcagtagtcagtctgagcgggacggtgtgcatgtgtct ctcacgctggacagactcctgcagaccctgcaggacagcagcaatatgagccgcatgctg caggaggttttggcctattctgtggcgtgtgttgcagtttcagcatttagtgcaggcatt attgaggccagtaaggctgaggaaagcatgaacacacttcgcaccctaacagaggaaagc caacagacaccaggctttgctttggcattggggctcacagtgtttggactctcttctttt ggtcatggtaaagcggtggacattcagcctcgtctgctggctgcctggaccaagatactg ctggcagagggttgtcccacaatgcagaggctgtctgccctcaatggactgatcgcatta gtgggatcagagatggctctcattcagctgaagagtgaatcagaggagtcctcacagcag cagggcagactgaacgaggtcatccgagccattacacagatcatcactttttcaggaaca ataggtctgcagtctaatggagcatgtctgcttggacacctgcatctggcccacatctcc agcagccacagtcgaaccgcagttcctcaggactttggttatctctcagagaaaagtgtc atccgagcttcagtagacttcatcaccgaagcaggaaggaaaggacctgagttcactcct ccacacctagtgaagacagtgctggcagctttagtgacggtcggtggaagctttcagtat cctccagtcaactggaacgccatcctctctccgctgatgagactcggctttggtgaggag gtgcagcatcactgtttagagttagctgccagtcaagcccagtcttcccagagtgcctca cttttcctcggcatctggcttgtgcctcccctggttcacagcctgagtctccgggctagg gcttctctctacgagtgcctgagctcctggatgaagcacgtggctgaagacaaactgcag gtgtacgtggacagtctggcagtccagcagtttgtgcccgacacacgtcctcagcgcctg cccctgtgcctgtgcatcctgagtgggctgtccaaagccatggcggtccccaacccgcca caaaactgctggactgccctgagctccaccactgaaaagatctacaacctcttacctgat aatatacctgctggtgaggtggacctgtatgaagccatgtgttcgtgtctgtctgaactg agcgacactgagatagaccgcatagtaaaagttactgaggctaatgtggaaaaaacagct ttcatcctatcctacctgacctctaaaggcagagtccctctcctgggactcaatgatgtc atcagtaccatcctccaggctgggaataagaaacgaatcagttggcttctcctgcagacc ctccaccaatcacgcttcgcctctagtcccaatacaggggtctctaaacgaatggagtgg cttttggagttaatgggccacatcagaaatgttgcatacggatctccttctgttaaatgt gtcagtgttgtagagggaaccgacttcctcctcggtgtgtttgctgcagcagtggtgtct tgggctgaccattgtgtcccgcttctcatcggaatcagggcccagtggtttccctggcaa cagtcctctctgacaacagagctgtcccatgacctctatgtcaaccctgctatcacagag ctctcggtcacgtcatgccttcttgcaatcccatgcagcatgaaaaaactactcgccaaa gagccgtggaaatcccagtcacagaagttcatcgactggctcttcagtattacagaaggc cctaaactaggtttctctgagactgccttactgacagccaaagcgactctaatggctctg agatccagctctgagttcaagaagaagggtgtgtggaccagggcgtatggttggtga

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