Cyprinus carpio (common carp): 109087874
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Entry
109087874 CDS
T05134
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109087874
03036 Chromosome and associated proteins [BR:
ccar03036
]
109087874
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
109087874
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
109087874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
109087874
NCBI-ProteinID:
XP_042594613
Ensembl:
ENSCCRG00000046774
UniProt:
A0A9Q9X3L3
LinkDB
All DBs
Position
B14:23954113..23971454
Genome browser
AA seq
701 aa
AA seq
DB search
MGDTLEFNDIHTEVKGSWNDGRLRFSKQSVVYKSHKTGKVDSIPAPELSAAQWRRVCVGH
GIKLATSTGHVYRYDGFKDTDFEKISAFFKSNYKVELAEKDMCVKGWNWGTAKFTGSLLS
FDVNDSPVFEIPLASVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPHIKQGQTRYHFLILFFSKDEDISLALNMSEDEVEKRYE
GKLSKNMSGPLFEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGAEGYSDSDEDQHDAYLERMKEEGKIREEGDGSDESEGDSDESF
NPGEEDDDVPEEYDSNASVSDSEADDGDSEEESKKKKPEKNTKKMLKNNKYRKPRKEKKV
KDPGAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKQLSKDRKEEWDRKAA
EAKKQYEKAMKEYRESGGGAAPVTKEKKKKGGKVEAKKKSGGEKEKKEGGNESFKSKEFI
SSEESSSESDHDRGSKRKASDDDDEEAASTPASSEEESGSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaatgacattcacacagaggtgaagggatcttggaatgac
ggccggctgaggttcagcaagcagtctgtggtctataaaagccataaaacagggaaggtg
gacagtatcccggcccctgagctctccgcggcccagtggcgtcgcgtctgtgtgggtcac
gggatcaaactggccaccagcaccggacacgtgtaccgatacgacggcttcaaagacaca
gattttgagaaaatctcagcgttttttaaatcaaactacaaggttgagttggcggagaag
gacatgtgtgtgaagggctggaactggggcactgccaaattcacagggtctcttctgtcg
tttgatgtgaacgacagtcccgtcttcgagatcccgctggccagcgtatcccagtgtgca
acggggaagaacgaggtgacggtggagtttcatcagaacgatgacgcggaggtgtccctc
atggaggtccgcttctatgtgcctcccaacaccggagacgacggctcagaccctgtggag
gcgttcgctcagaatgttctgtcgaaggcagacgtcatccaggctactggagacgcggtg
tgtatctttaaagagcttcagtgccttacaccgagaggaaggtatgatatccgtatctac
cccaccttcctgcacctgcacgggaagacgtttgactataagatcccctacaccaccgtc
ctgcggctcttcctgctgccgcacaaggaccagaggcagatgttctttgtgatcagtctc
gacccacacattaaacagggtcagacacgttatcatttcctcatcctcttcttctccaaa
gatgaagatatcagtcttgctctcaacatgagcgaggacgaggtggagaagcgttatgaa
ggcaagctcagtaagaacatgtccgggccgctcttcgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacggtgcccggaaacttccagggtcactcggggtctcag
tgtataacgtgtgcgtacaaggcgagctcagggctgctgtatcctctggagcgaggcttc
atctacgtgcacaagccgccggttcacctgcgcttcgaggagatctcctgcgtcaacttc
gccagaggaaccaccaccacacgctccttcgacttcgagatcgagaccaagcagaataac
cagtacaccttcagcaacatcgagagggaagaatacggaaaactctttgactttgtcaat
gccaagaagctgaacatcaagaacagaggatttaaagagggcatgaaaggagcagagggc
tacagcgactctgatgaagaccagcatgacgcgtacctggagagaatgaaagaagagggc
aagatcagagaggagggagacggcagcgacgaatcggagggagatagcgacgagtccttt
aaccctggagaagaggatgacgatgttccagaagagtatgacagtaacgcttcagtgagc
gacagtgaggcagatgacggagacagcgaggaagaaagcaagaagaaaaaacctgaaaaa
aacaccaaaaaaatgttgaagaataataaatataggaaaccacggaaagagaagaaggtg
aaggaccccggggccccgaagaggccgatgagcgcctacatgctgtggctgaacggcaac
cgagagcgaatcaagagcgagaatcctgggatatcagtcactgaaatctccaagaaggct
ggagagatgtggaaacagctgagcaaagaccgcaaagaggagtgggacagaaaagctgca
gaggccaagaaacaatatgagaaagccatgaaagagtacagagagagtggaggaggagcg
gcgcctgttactaaagaaaagaagaagaaaggagggaaggtggaagctaagaagaagagt
ggaggagaaaaggagaaaaaggaaggtggaaacgagagctttaagagtaaagagttcatc
tccagcgaggagagctcgtctgaatctgatcacgacagaggaagcaaacgcaaggcttct
gatgatgatgatgaggaggccgcctccacacccgccagctcagaggaggagtcgggatcg
gactga
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