Cyprinus carpio (common carp): 109087901
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Entry
109087901 CDS
T05134
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109087901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109087901
03032 DNA replication proteins [BR:
ccar03032
]
109087901
Spliceosome [BR:
ccar03041
]
Complex A
U1 snRNP components
Sm proteins
109087901
U2 snRNP components
109087901
Complex B
U1 snRNP components
109087901
U4/U6.U5 tri-snRNP components
109087901
Complex C
U2 snRNP components
109087901
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109087901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
109087901
NCBI-ProteinID:
XP_018957635
UniProt:
A0A8C1JJ20
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All DBs
Position
A18:7530506..7539364
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AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttaaacaagcccaagtctgagatgactccagaggagctccagaagcgagag
gaggaagagtttaacaccggtccactttcagtgctcactcagtctgtgaagaacaacaca
caggttcttatcaactgccgcaacaataagaagctgctgggcagagtcaaagcattcgac
aggcattgtaacatggttttagagaatgtgaaagaaatgtggacggaggtgcccaaaagt
ggcaagggcaagaagaagtcaaagccagtcaacaaggatcgttacatctcaaagatgttc
ctgagaggcgattcagtcatcgtggtgctgagaaacccactcatcactgggaaataa
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