Cyprinus carpio (common carp): 109088009
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Entry
109088009 CDS
T05134
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109088009
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109088009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109088009
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109088009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
fn3
hEGF
EGF
FN3_Tor_3rd
Fn3_Dep-1_2nd
EGF_integrin
Ig_J
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
109088009
NCBI-ProteinID:
XP_042601319
Ensembl:
ENSCCRG00000043702
UniProt:
A0A9Q9XGC7
LinkDB
All DBs
Position
B19:complement(605962..654500)
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AA seq
1207 aa
AA seq
DB search
MALVLPFLLLLLPSPALSSQHLQTGAHRVSRDIKPQPIKLVISDTCAQDGAKDRELDLDP
DSPLVLTHRIRLVPGSGSACGQCELDFAALRDRIERLEKEVSDLREKCGGPEGCCSSQQS
KGAVCTTVRPTTDKCPDDCSDQGRCVDGKCVCFPGFSGPDCSVPDCPDDCSSQGQCVNGQ
CVCDPGFTGPDCSSSTCPDNCSDKGRCVNGRCVCDAGFTGPNCGTPGCPDNCNKRGRCVN
GQCVCDAGFTGPNCSTRGCPDNCNKRGRCVNGQCVCDAGFTGPNCGTRGCPDNCNKRGRC
VNGQCVCDAGFTGPNCGTRGCPANCNKRGRCVNRKCVCDSGFAGHDCSEISCPGNCNDRG
RCVNGQCVCDPGISGSDCSVRTCPENCNNRGQCVNGKCVCESGFTGPNCSSRSCPGDCSN
HGRCVDGRCVCDSGFTGPDCSAKACPNDCSNKGRCVNGKCVCEAGYSGQDCSTKTCPNNC
NNKGHCVRGRCVCQRGFTGPDCTECQSGFTGENCDTALAGVSRLNTRDITESSVTLFWTP
PAVQYDTYHITFTSRKETDQKISSKINGRLSTYTQMGLAAGQEYTVSITGEKDGIMGTES
TAEFTTLISGPKDLQVVKTTTTSVIVQWEKAQGEIDRYVLTIAPNQTDGSSRLPEINLLP
EKDSAQINSLEPGRLYDISLVAEKDSIRSLPTTTQATPGPEPPSNLAFSNVTDSSFTVSW
TKPRSKVSGFKITYTHVQEGEPNSVSVDSETVHLSLSPVSPGSTYEVRVMSLLGQDESDS
IQDTVTTLPDPPTDLRAINVTDSKALLLWRPALATVDHYVIVYSSDTAPGPGISIRVSGN
AAEEQLQALQSSTRYRVSVHSQLGDRSSSRATTAFTTSSGYSQFATSKKVDGPRDLKAGQ
VTPRTAVLSWKAPVSAVSSYRLSYYTDGQDVQEVILGPTVKEFKLTRLYPSSTYTAHLQA
ERDGLYMSTISTDFTTGSPCHSALSLSGNLRFPFPTDCSQEKKNGALESGIVEVFPQGRE
GKPLMVYCDMETDGGGWTVFQRRKDGKMNFFRSWHEYSNGFGAMDGEFWLGNEKLHNFTK
MSPMTLRVDLRAGEETVYAHYSSFSIDNAKKHYTIRVSGYSGTAGDSLTYHNGWPFSTRD
RDPQPFITRCAMSYRGGWWYKNCHEANLNGLYNTNTNQQGVIWTEWKGKDFSIPFTEMKF
RPASFRP
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagtgttgcctttcctgcttctgcttctgccaagtcctgccctctccagccaa
catctgcagacaggagctcatcgcgtctccagagacatcaaaccccagcctattaaactt
gttatttcggacacatgtgcacaagatggggccaaagacagagagctagacttggatccc
gattctcctctggtcttgacccatcggatccgtctggtgccagggtcaggttcagcttgt
ggtcagtgtgagctggacttcgcagccctgcgtgatcgcattgaaagactggagaaggaa
gtttcggatctgagggagaaatgtggaggtccagaaggatgctgcagctcccagcagagc
aaaggtgcagtctgtaccaccgttcgtcccacaactgacaagtgtccggatgactgcagt
gaccagggtcgctgtgtagatggcaaatgtgtctgtttcccaggattcagcgggcctgac
tgcagtgtgcctgactgccctgatgactgcagcagccagggccaatgtgtgaatggccag
tgtgtgtgtgacccaggctttactggcccagactgctcctccagcacatgtcctgataac
tgcagtgacaagggccgctgtgtgaacggcaggtgtgtgtgcgatgccggctttaccggg
cctaactgcgggacaccgggctgtccagataactgtaacaagcggggtcgctgcgtgaac
ggccagtgtgtgtgtgatgcagggtttaccgggcctaactgcagtacaaggggctgtccg
gataactgtaacaagcggggtcgctgcgtgaacggccagtgtgtgtgtgatgcagggttt
accgggcctaactgcggtacaaggggctgtccggataactgtaacaagcggggtcgctgc
gtgaacggccagtgtgtgtgtgatgcagggtttactgggcctaactgtggaacacggggg
tgtccggctaattgcaataaaaggggccgctgtgtgaatagaaaatgtgtgtgcgactca
ggatttgctggtcacgactgctctgagatctcctgcccagggaactgtaatgacaggggc
cgatgtgtgaatggacagtgcgtgtgcgatcctggcatctctgggtcggactgctctgtc
agaacatgtccagagaactgcaacaatcgtggacagtgtgtaaacggcaagtgtgtctgt
gagagcggctttacgggccccaactgctcgtccagatcttgtcctggagactgcagtaac
catggcagatgcgtcgacggccgctgtgtgtgtgatagcggttttacaggaccagactgc
tcggccaaggcttgtcccaatgactgcagtaacaaaggcagatgtgtgaatgggaagtgt
gtctgtgaagcaggctactccggtcaggactgctccaccaaaacctgccccaacaactgc
aataacaagggccactgtgtgaggggtcgctgcgtgtgccagcgtggtttcacggggcct
gactgcaccgagtgtcagtcgggcttcacaggggaaaactgtgacactgcactggcgggc
gtctcgcgtctcaacaccagagacatcactgagtcatctgtcactctgttctggactcca
cctgccgtgcagtacgacacctaccacataaccttcaccagcaggaaagaaacagatcag
aaaataagctccaaaatcaatggcagactgagcacctacactcagatgggactggccgct
ggacaggagtatacggtcagcatcactggagagaaagatggcattatgggaacagagagc
acagcagaattcaccacattgatctctggcccaaaagacttgcaagttgtgaagacaacc
actacatcagtcattgtccaatgggagaaagcacagggggagattgacaggtacgtcctc
accattgcacccaatcagacagatggatcaagcagacttccagagatcaacctgctgcca
gagaaagattcagcccagatcaacagtttggagccgggccgcttgtatgacatctcatta
gtggcagagaaagatagcatccggagcctgccaacaaccacacaggcaacccctggccct
gagcctccatccaatctcgccttcagcaatgtgaccgacagctctttcacagtgtcctgg
accaaacccaggagcaaggtgtctggattcaagatcacgtacactcacgtgcaagaaggt
gagccgaactctgtcagcgtggactcagaaacggtccatctgtccctctcgccagtgtct
cctggctccacctatgaggtccgtgtgatgtctctactcggacaagacgaaagtgactct
atccaggacactgtaaccactttgcctgacccaccaacagacctgagggccataaacgtc
acagacagtaaagcgctgctcctgtggagacctgcgttggctaccgtcgaccattatgtc
attgtgtatagttctgacacagcacctgggcctggaatcagcatcagagtgtctggcaac
gctgctgaagagcagctgcaagcactgcagtcctccacacggtacagagtgagtgttcac
agccagctgggagaccggagcagctccagagccaccacagccttcactacatccagcggt
tattctcagtttgccacaagtaaaaaggtggatggtcctcgtgatctcaaagccggtcag
gttacgcctcgtaccgcggttctgtcttggaaagcacctgtatcagccgtcagcagttac
aggctgagctattacacggatggccaggacgttcaggaagtaattcttggccccacggtc
aaggagttcaagttaaccagactgtacccatcgtcaacatacacagcacacctgcaggcc
gagcgggacggtctgtacatgagcaccatctctacagacttcaccaccggttccccctgt
cactctgctctctctctctcagggaatctccggttcccgtttcccactgactgctcgcag
gagaagaagaacggagcgctggagtctggtattgtggaggtgtttccacagggccgcgag
ggaaagccgctgatggtttactgtgacatggagaccgatggaggaggatggacggttttt
cagcgaagaaaggatgggaagatgaacttcttcaggagctggcatgaatatagtaatgga
tttggagcaatggatggggaattctggctcggaaatgagaagcttcataacttcactaag
atgagtccaatgacactgagagtagacctcagagcaggagaagagactgtttacgcacac
tattcctcattctccattgacaatgcgaaaaaacactacaccatcagagtgtctggatat
tctggcacagctggtgactcactgacgtaccataatggatggccgttctccacgcgggac
agagaccctcagccattcatcacacgctgtgccatgtcctacagaggcggctggtggtat
aagaactgccatgaggccaatcttaatggcctctataacacaaacaccaatcaacagggc
gtgatctggacggagtggaaaggcaaagatttctccattcccttcactgagatgaaattc
cgcccagcctcattcagaccctga
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