Cyprinus carpio (common carp): 109088010
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Entry
109088010 CDS
T05134
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109088010
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109088010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
109088010
NCBI-ProteinID:
XP_042627017
Ensembl:
ENSCCRG00000038435
UniProt:
A0A9Q9YV81
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All DBs
Position
A15:complement(13887711..13918761)
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AA seq
2102 aa
AA seq
DB search
MMSSCFVPNGASLEDCHSNLFCLADLTGIKWKCFVWQGPTSSPILFPVTEEDPILCSFSR
CLKADVLSVWRRHQTPGRRELWIFWWGDDPNFAELVHHDLSCNEDGSWESGLTYECRTLL
FKAIHNLLECCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFVHGDSNVCTSVE
INQHQPVYLLSEEHLSLAQQSSSSVQVVLSPYGLSGTLTGQSFKLSDPPTQKLIEEWKQF
YPIGPNTKEVTDDKMDDLDWEDDSLAAVEVVVAGVRMVYPASLVLVAQSDIPVMATVSSS
TSSGSYSGGQHSHMVHGDTGISSVTLTPPTSPEEAQAVSQPAQKWVKLSAMSGAFNVDSS
SHHGGKIPRRLASQMVERVWQECNINRAQNKRKFSTMSNGVCEEETDKASVWDFVESSQR
SQCSCSRFKNQKQRACSTPGHPPSAGQPPQPSTKHKMAEKLEKGDKQQKRPQTPFHHRSS
LCEEQPNLEQGDGVHRLCLQGHEDSRYPSLHHADVTSSKTPMLHSSTDEMAGSPQPPPLS
PHPCERGEETADGLKTSSSPLHQHFYPPSSEPCLVPQKPPDDSPLDPMPLPCPPPYPESL
EATVYIGSAINPNEDTTHNPWRYFRVPGRKNADFQTPQLPVVTLFEDGNRAGGQDGVVSV
TEFMSSSKRPLKVSEELVKMYEQKKKQYLSAAECDGDQEHESDPYAFVEGDEEFTFSDKD
KKPGAEREPGKKNKRDDGSLPSSDDAQGSGGSKPLPTTSLIHETDLVVSINDLDNLFNSD
EDDLTPGSRRAAGVTEGKFGRKEPKPAAPDPLPYSADLHQMFPTPPSLEQHIIMGYSPIN
MGNTESGAGLSLLDGAISGHFKMEVEEGFCSPKPSEIKDFSYVFKQESCQALIGCSLYAP
LKMLPSHCLLPIKLPEECVYRPSWTVSKLEMLHPMAAMTFLNKDSNIPSVGSAVEQDQSC
TPQTHNTFMSNSAPPSNCGAGILPSPATPRISAPTPRTPRTPRTPRGPASVQGSLKYENS
DLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCN
MNITGADVGVYISDPNMDSQYSSMDPCSCGFSAVMNRRYGNGAGLFLEDELDIMGRGSDA
GRETEKHFEAVRAASLQIGAALKEQVPDDLILLLQDLCTNPFSPIIRPEHPSTSLKTPLR
LEERDYYSDCYLALEHGRQFMDNMSGGKVDEMLIKSSSLHHWAKRNAFDMSMLFSQDVLR
MLLSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTLLVGY
EYDYVVLSPFALPYWEKLLLDPYSSQRDIEYMVVCPDNEALLNGAKTFFRDLTAIYESCR
LGQHKPIAKSHADGIVTVSDTGAKPLPDQTLTDWLSKTINSSSSEAFNKLKLYAQVCCHD
LASILASQSLDSSLPSQRNPTSSTHTSSSGSPVTAAQSTTPSTNSTSNTNTTTTSTPSSS
SSCSQGIGTMPSSKPNSLPPFGGLQSSQPTGGQSAGTLGDGTSATNQPQVQSEPAESTME
REKVGVPTDGDSHAVTYPPSIVIYIVNPFSYEETGQGGNSSVWTMGLLRCYLEMLQTLPP
HIRNAVYVQIIPSQYLLQPVWSEERHIYAQHLKSLAFSVYTQCRRRLPTSTNVKTLTGFG
PGLAIDTALQSKERPECLHLYAPPFVLAPVKDKQTELGETFGEAAQKYNVLFVAYCLSHD
QRWLLASCTDQYGELLETCVISIDVPNRARRKKGSARRQGLQKLWEWCLGLVQMTSLPWR
IVIGRLGRIGHGELRDWSIMLSRRNLQSLSRRLKEMCRMCGISAADSPSILSTCLVAMEP
QASFVIMPDSVSTGSVFGRSTTLNMQSQLNTPQDTSCTHILVFPTSAGLQAFNPNNDVTD
GMGGMDGILDLLSENDLVDPDLINILPNSPTTSPVHSPGSHYHHGGDGSKGQSTDRMESH
DESPNILQQPMALGYFVSTAKAGPLPDWFWSSCPQAKNQCPLFLKASLHLNVSSVQSDEL
LHSKHTHPLDSSHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQMYNLIMN
ML
NT seq
6309 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcttgttttgtacccaacggggcgagcctggaggactgccactccaatctc
ttctgtctggctgacctcactgggatcaaatggaagtgttttgtatggcagggccccact
tcgtcccccatcctcttcccggtgacggaggaggaccccatcctgtgcagcttcagtcgc
tgcctgaaggcagacgtgctgagcgtgtggcggaggcaccagaccccgggccggcgggag
ctctggatcttttggtggggagacgaccccaactttgccgagctcgtccaccatgactta
tcatgtaatgaggacggttcgtgggagagcggcctgacctacgagtgccgaacgctgctc
ttcaaagccatccataacctgctggagtgctgcctcatgaaccgatcctttgttcgtatc
ggcaagtggtttgtcaaaccctacgagaaggatgagaagcccatcaacaaaagtgagcac
ctgtcctgctccttcacgttcttcgtacatggagacagtaacgtgtgcaccagcgtggag
attaaccaacaccagcctgtctatctgttgagtgaggagcacctgagtttggcccagcag
agcagcagctcggttcaagtggtcctctctccatatggtttgagtgggactctgacgggc
cagtccttcaagctgtcagatccaccgacccagaagttgattgaagaatggaagcagttc
tatcccataggccccaacaccaaggaggtcacagatgacaagatggatgacctcgactgg
gaggatgattccttggctgctgttgaggttgttgttgctggggtgaggatggtgtaccca
gccagcctggtgctggtggcccagtcagacatcccagtcatggctacagtgagctcttcc
acctcctcgggctcttactcaggaggtcagcacagtcacatggtccatggagatactggc
atctcttcagtcactctgactcctcccacttcaccagaggaggctcaagcagtttctcag
cctgcccagaaatgggtgaaactctcagctatgtcaggcgcctttaatgtggacagcagc
agtcatcacggaggcaagatcccccgccggctagccagccaaatggtggagcgagtctgg
caggagtgcaatattaaccgagcccagaacaagagaaagttttcaaccatgtctaatgga
gtttgcgaggaagaaacggacaaagcttctgtttgggactttgtggagtcgtctcaaagg
tcacagtgcagttgctcaaggtttaagaaccagaaacagcgggcatgtagcaccccaggg
catcctccatctgctggccaacctcctcagccctctaccaaacacaagatggcggagaag
ctggagaaaggagacaagcagcaaaagaggccacagacgcccttccaccaccgcagctca
ctgtgtgaagaacagcccaacttggagcagggagatggtgttcacaggctgtgtctgcag
ggccacgaggacagccgctaccccagcctccaccacgctgacgtcacctccagcaagacc
ccaatgctgcacagctcaactgatgagatggctggctctcctcagcccccgccgctcagc
ccgcacccttgtgagcgcggagaggagactgccgacggcctaaagacttcctcctcaccc
ttgcaccaacacttctatcctccttcctctgagccctgcctagtaccccagaaaccccca
gatgattctccattagacccaatgcctttaccctgcccacctccatacccagagtcccta
gaagccaccgtgtacattggctccgccataaaccccaacgaggacacaacacataacccc
tggaggtactttagggtgcctggtaggaagaatgcagatttccaaacacctcagcttcct
gtggtcacactattcgaggatggtaacagagccggaggccaggatggtgttgtgtcagtt
acagagtttatgtcctcttccaaaaggcctctgaaagtgtcggaagagctggtgaagatg
tacgagcaaaagaaaaaacagtatctctctgcagctgagtgcgatggagaccaggagcat
gaatctgatccttatgcttttgtggaaggagacgaggagtttactttctctgataaagac
aaaaaaccaggagccgagagggagcctgggaagaaaaataagagggatgatggcagtttg
ccatcttctgatgatgcccaggggtcaggtggcagtaaaccacttcctaccaccagcttg
attcatgagacagatctggttgtgtccattaatgacctggacaacctctttaactctgac
gaggatgacctgacgcctggatccaggagagctgctggtgtaacagagggaaaatttggt
aggaaagaaccaaaacctgcagcgccagaccccctgccttattctgcagacctgcaccag
atgttcccaacccctccatcactggagcagcacatcatcatgggctactctcctataaac
atggggaatacagagtcaggggctggcctctctcttctggatggggccatcagcgggcat
ttcaagatggaggtggaggagggtttctgcagccccaaaccctcagagattaaggacttc
tcctacgtgtttaagcaagagtcctgtcaagcgctcatcggctgctccctttacgcccct
ctgaagatgctgcccagccattgtctgcttcccatcaagcttccagaagagtgtgtgtac
cggcccagctggacagtcagcaaactggagatgcttcatccgatggcagccatgaccttc
ctcaacaaggacagcaacatccctagtgtaggaagtgcagttgagcaggaccagagctgc
acccctcagacacacaacacctttatgtccaacagcgccccgcccagcaattgcggcgct
ggcatcctgccctcccctgccacccctcgaatctccgccccaacgccacggacaccccgg
accccacgcacccccagaggccctgccagcgtccagggctcactgaaatacgagaactct
gacctctattctcccgcctctacaccctccacctgccgacctttaaattcagtggagccg
gccaccgtgccctccatcccggaagctcacagcctatacgtcaccctcatcctctcagaa
tcggtcatgaacctcttcaaggactgcaactttgacagctgttgcatctgtgtctgcaac
atgaacattacgggggcagatgtgggcgtctacatcagcgatcccaacatggactctcag
tactcaagcatggacccctgctcttgcggttttagcgcggtcatgaaccgtcgctatgga
aacggggccggcctctttctggaggatgagctggacatcatgggaaggggttcagatgct
ggacgggagactgagaagcactttgaagctgtacgcgcagcctcccttcagataggggcg
gcccttaaagagcaggtcccggatgatctaatcctcttgctgcaggacctgtgcactaac
cccttctcccccatcatcaggccagaacatcccagcaccagtctcaagacccccttgcgc
ctggaggagagggactattacagtgattgctacttggctctggagcatggcagacagttc
atggacaacatgtctgggggaaaagtcgatgagatgctgatcaagagctcctctttacac
cactgggccaaacgcaacgctttcgatatgagcatgctgttctctcaggatgtgctgagg
atgctgctgtcactgcagcctgtcctgcaggacaccatccagaagaagaggtctgtgcgc
tcttggggagtccagggccccctcacctggcagcagttccacaagatggctggcagggga
tcgtacggcacagatgaatctccagagcccctccccattcccaccttattggtaggttac
gagtatgactatgtggtgctgtctccttttgctctgccatactgggagaagcttctgtta
gacccgtacagctctcagcgggatatcgaatatatggtggtgtgtcccgacaacgaagcc
ctgcttaatggagccaaaactttcttcagagacttgacagctatatatgagtcgtgtcgg
ctcggtcagcacaagcccatcgctaagtctcatgctgatggcattgtgacggtgagtgat
actggagccaaacctctcccggatcagactctcactgactggctctcaaaaaccataaac
agcagcagcagcgaggcgtttaacaaactcaaactctacgcacaagtgtgctgtcacgac
ttggcgtccattctggcatcccagtctttggacagctcactgccttcccagcgaaacccg
accagctctacacacacttccagctctggtagccccgtaacagccgctcagagcaccacc
ccatctaccaacagcacctccaacactaacaccaccaccacatccacgccttcttcctct
tcctcctgctctcagggcataggcaccatgccatcttccaagcccaattcactgcctcct
tttggaggcttgcagtccagccagccgactggtggtcagagtgcagggactctgggtgac
ggcacgtcggccaccaaccaacctcaggtccagtctgagcccgcagagagcacaatggag
agagagaaggtgggggtgccgactgatggagactcccacgccgtcacctatcctccttct
atagtgatctacatcgtaaatccattcagctatgaggagacaggccaaggcggcaattct
agcgtgtggacgatgggtcttcttcgctgttatctagagatgcttcagactcttcctcct
cacatcaggaatgctgtatatgtccaaattatacccagccagtacttgctgcagccggtc
tggagtgaggagcgccatatatacgcacagcacctgaagtctctggctttctcagtttac
actcagtgcagacggcgtctgccaacctccactaatgtcaaaacgctaacgggcttcggc
cctggcctggccattgacactgcactacagagcaaagagagaccagagtgtttacatctc
tacgcaccaccgttcgtcttggcaccagtgaaggacaagcagacagagctgggtgagact
tttggagaggctgcccagaaatacaacgtgctgtttgtggcctactgcctgtcacatgac
caaaggtggctcctggcttcatgcacagaccagtacggagagctgctggaaacctgcgtc
atcagcattgacgtacccaaccgagctcggaggaaaaagggctctgcacgacggcagggc
cttcagaagctttgggaatggtgcctgggtctcgtacagatgacctcacttccttggcgc
attgtgattggccggctcggaaggataggtcacggggaattacgtgattggagtattatg
ttgagtaggcgaaacttacagtctctcagcagacgactgaaggagatgtgcaggatgtgc
ggcatctctgccgcagacagtcccagcatactcagtacctgtttagtcgccatggaacca
caggcatcctttgtcatcatgccagactccgtgtccactggctccgtgtttggccgcagc
acgaccctgaacatgcagtcacagttaaacactcctcaggacacctcctgcactcacatc
ctcgtgttccccacttctgccggcctccaggcctttaatcccaacaacgatgtcacagat
ggaatgggcggcatggatgggatcttagacctgctgtcagagaatgacctggttgatcct
gatctcattaacatcctacccaactctcccaccacctccccagtacactcgcctggctca
cattaccaccacggaggagacggaagcaagggccagagcacagacaggatggagtctcac
gacgagtctcccaacatcctccagcagcccatggctctgggctactttgtgtcgacggct
aaagctggcccactgcctgactggttctggtcctcctgcccacaggcaaagaaccaatgt
ccacttttcctgaaggcttctctgcaccttaatgtttcatcagtgcagtcagatgagttg
ctgcacagtaaacacacacaccctctggactccagccatacctcagatgtgctcagattt
gtgctggaacaatataacgccctgtcatggcttacctgtgacccagcgactcaggaccgg
cgctcttgtctgcccgtgcactttgttgtgctcaaccaaatgtacaacttaataatgaac
atgctctaa
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