Cyprinus carpio (common carp): 109088256
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Entry
109088256 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109088256
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109088256
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
TPR_14
TPR_7
TPR_NPHP3
SH3_1
TPR_10
TPR_19
SH3_9
ARM_TT21_4th
SH3_2
Motif
Other DBs
NCBI-GeneID:
109088256
NCBI-ProteinID:
XP_042584266
UniProt:
A0A9Q9WJ08
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All DBs
Position
B7:31528413..31544789
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AA seq
1314 aa
AA seq
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MSAAVRRNSSKTGNGVESDPDGIQTIRRELSTESTHDEWDNAIESSSKDFKTSRGSIKGT
SGASDDNIPTVLAMQLAMVEGPDRLPADEGTQEVLCRKLCVLEADLSAFIALISELSAHF
VSINSEERTIFITFKTLEEIWKFSTYHKMGFLGQCMENLLMNQEFWLTSLDQLSGIEISI
KEETLNLMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTVL
SLADGARGTKPKPALEPVIPFHEWFLKSCPESILVGGGKDTSDLPFQIAVGVCEATEEYN
ADGPDELSFQAGERIIILGLLVACFDWFMGKSERTGDIGLVKTNLVKTTSSFCESSDIFL
KDEDRQIATLDQNKIKEDTIALLKKICQSDVGTNYKLDLAKEIPGSVQNKTHQTELNNLK
QKVKHILSEVDESQRNDVSSVSSKQQMKKDADDTESSQEIPRFSVCFEQDSTSPDEHHAL
LSFLSSREHQPGFLLLYRAYPEFLLSHFEGHSDEEEIVAYLGVARELARKKRVSWAQSRI
CFLLGQLCAGRSKFSQARVYYEEALNVPRDSFTDMFLLSAIYSNLALIYLTQKNHEKFSS
FSERLSALLMAVPDCLFGCEDPEVLKYVLKKAVLAKNLPAEARACFLLAKLHLKLKDGLS
AIPFIERLLILADEVPDACDETLSQVFLVLARLYSDQRQPRLAESCAKRASLQVGATVSH
CXNALEMYGVAVPTQVAPYLTRAAALVSPSKEPVLGHIHALCLSWLFHIHGMPDRAVRYM
STVLDHSGMSSVGQSDTTAALLWLAWLYICNQQPSTALEVLDAVLSSLPEHCTTQLEGVV
YNMRAISYRHSADIRQAAESYQAAVEICEEFEDRRNWAIALANFGFMCLQIKAKRLAEEY
LTQSVELFSELEDEEHELSFILVLLELGKHFVSQGNHESGKIYYEWALLSAMFINHIDSQ
LQATRHLCQLYEEVCPDEAQCIIYNEHQLNLLQRIGDKSLEGEILEKISQLYLNLATEKA
NRAALDYTKRSLGIFIDLGRKRKEAHAWLKAGKIYHILQQTELVDLYVQVAQDMALSTGD
TLFTLEMLEAAGDVFFNSSRDREKAICFYRDRALPIAVKTSSVRSQLRLCNKLSELLLQL
GQCSEAIEYAQTALDISFSLADDLNERVAFHRLATLYHCLGQFEMAEHHFLKALSLCPSP
LQYDEETLYYVRVYKTLGDIVFYDVKDPFDAAGYYHLALAAAMDLGNKRSQLELCTQLAT
IYHNCLMDRELSLFFYQRARAFANDLHIRRINLAPDYSFRTTAQYKNTITGATR
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcggttcgtagaaactcgtccaaaaccgggaacggcgtggagtccgatccg
gatggaattcagacgatacgcagagagctgtccactgagtccacacacgatgaatgggat
aatgctattgagtcttcatctaaagattttaagacctcaagaggaagcatcaaaggtact
tcaggagcttctgatgataatataccgacagttttggctatgcagctggctatggtggag
gggccagatcgacttcctgctgatgagggcacacaggaagtgctttgcaggaaactttgt
gtgctggaagctgacctctcagcattcatagccttaatctctgagttgtctgctcatttt
gtatccatcaatagtgaggaaaggactatatttatcacctttaaaacacttgaagaaata
tggaagttcagcacataccacaaaatgggctttttgggtcagtgtatggaaaaccttctc
atgaaccaggagttctggttaacctcccttgatcagctttcaggaattgagatctcaatt
aaagaagagacactaaatctgatgtataaaggctttctaatgcaagaagggtctttcttt
ggatgctgcacagcaaatcagatgtttgatagctctacgtcaggaagcgacctttatctg
gagaagggggacatcgctttgtttgagcctccattcctaggttcggggtggacagtgctg
tcacttgcagatggggctagaggaaccaaaccaaaaccagctctggagccagtcattccc
tttcatgagtggtttctaaagtcctgcccagagagtatattagtgggtggtggaaaggac
acaagtgaccttcccttccagattgcagtaggggtctgtgaggccacagaagagtataat
gctgatggaccagatgaactgagtttccaggctggtgaacgtatcatcatcctgggcctg
ctggtggcctgttttgattggtttatgggaaaatcggagagaactggggatatcggcctc
gtcaaaaccaacctggtcaaaacaaccagttcattttgtgaatcatcagacatattcttg
aaagacgaggatagacaaattgctaccttggatcagaacaaaattaaagaggacactatt
gctttattgaagaaaatatgccagtctgatgttggcacaaactacaaacttgatctagca
aaagaaattccaggatcagttcaaaacaagactcatcagacagaattaaacaacctaaaa
cagaaagtcaagcacattttgagtgaggtagatgagtctcaaagaaatgatgtttcatcg
gtcagcagcaagcaacaaatgaagaaagatgcggatgatacagagtcgtcccaggaaatc
ccacgcttttctgtctgcttcgagcaggacagcaccagtccagatgaacatcatgcactg
ctttcattcttgagcagccgtgagcaccagccggggttcctgcttttgtacagggcttac
ccagaattcctcctctcacatttcgagggtcactctgatgaagaggagatagtggcatat
ttaggcgtagctcgagaactggcacgaaagaagcgagtctcttgggcgcagagtcgaatt
tgttttcttcttggacagctttgtgcagggaggtcaaagttctctcaggctcgggtttat
tatgaggaagccttgaatgtacccagggactctttcacagatatgtttctgctctctgcc
atttactccaacctggcactcatctacctaacacagaagaaccatgaaaaattttccagt
ttttcagagcgcttgtctgctttgttgatggctgtccctgattgtttgtttggctgtgag
gatcctgaggtattgaaatatgtactaaaaaaagccgtcctggctaagaatctgcctgct
gaggcacgagcctgcttcctcctggcaaagctccacctgaagcttaaagacggcttgagt
gcaatcccattcattgaaaggcttttgatccttgctgatgaagttcctgacgcatgtgat
gagacattgagccaagttttcctggtgttagcaagactctacagtgaccagagacagcca
cgcttggctgaaagctgtgcaaagcgagcatcacttcaggtaggagccaccgtgtcacac
tgtnnaaatgcattagagatgtatggagtggccgtcccaacacaagtggctccatacctg
acccgtgccgctgctttagtgtcccccagcaaggagcctgtgctgggtcatatccacgct
ctatgcttgtcctggctcttccatatccacggcatgcctgacagagctgttcgctacatg
tccactgtcctcgaccacagcggtatgtccagcgttggccagtcagacactactgctgct
ctcctgtggttggcgtggctgtacatctgcaaccagcaacccagcacagctctggaagtg
ctagacgctgtgctttcatcgcttcccgagcactgtactactcagctggaaggagtggtt
tacaacatgcgggccatttcatacagacattcagcggacatccgacaggccgctgagagt
taccaggctgcagttgagatatgcgaggagtttgaggatagacgtaactgggccatagca
ctggccaactttggattcatgtgtttgcaaatcaaggcaaaaagattggcagaggaatac
ctcacccagtcagtggagctgttctctgagcttgaggatgaagagcatgaactcagtttt
attttagtgcttcttgagttgggaaaacactttgtttcccaaggaaaccatgagagtggg
aaaatatactacgaatgggccctgctgagtgccatgtttatcaatcacattgatagccag
ctgcaagccacacgtcacctgtgtcagctttacgaagaggtgtgtccggatgaagcccag
tgtatcatctacaacgagcaccagctgaaccttcttcagcggataggagacaagagctta
gagggagagatactggagaagatcagccagctgtacctgaacctggctaccgagaaagcc
aatagagctgctttagattacaccaaacgaagcctgggcatcttcattgacttgggcaga
aaacgcaaggaggctcatgcctggttaaaggcgggaaagatttaccacatcctccaacag
acggagctagtggacctctacgtgcaggtagcccaagacatggctttgagcacaggagac
acactcttcaccctggagatgttggaggcagctggagatgtgttcttcaacagttcacgg
gacagggagaaagccatctgcttttacagagaccgagcccttcccatcgcggtgaagacg
agcagtgtgcgctctcagcttaggctgtgtaataagctttcagagctcctgctgcagctg
ggacagtgttcagaggccattgagtatgctcaaactgcattagacattagcttcagtctg
gctgatgatttaaatgagcgggtggcattccatcgactcgccacattgtaccattgtctg
ggtcagtttgaaatggcagagcaccactttctgaaagccctgtccctgtgcccctcaccc
ctgcagtacgatgaggaaaccctgtactatgtccgggtttacaaaacacttggagacatc
gtcttctatgatgttaaggacccatttgatgctgctggctattatcacctggccttggct
gctgctatggatctgggcaacaagaggtcccagctagagctgtgcactcagttggccacc
atctatcacaactgtctcatggaccgtgagctctcgctgtttttctaccagcgagcgaga
gctttcgctaatgatctccatattcgtcgtatcaacctggcaccagactacagcttcagg
accacagcccagtacaaaaacacaataactggggcaacaagatag
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