Cyprinus carpio (common carp): 109088410
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Entry
109088410 CDS
T05134
Symbol
six6a
Name
(RefSeq) homeobox protein SIX6a
KO
K19473
homeobox protein SIX3/6
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109088410 (six6a)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
109088410 (six6a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
109088410
NCBI-ProteinID:
XP_042593179
UniProt:
A0A8C1ISC5
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Position
B13:20979386..20983636
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AA seq
245 aa
AA seq
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MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPSACEVLGKNESVLRARAVV
AFHAGNFRELYHILENHKFTKDSHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVLSGGSVRSLGDDDTTVDRLGPASSPEVSLSSKAATSAISITSSD
SECDI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgttccagctgcccatcttgaatttcagcccccagcaggtcgcgggggtctgcgagacg
ctcgaggagagcggcgacgtggagaggctcggccgcttcctctggtctctcccggtggcg
ccgtccgcctgcgaagtcctcgggaagaacgagtctgtcctgcgcgcgcgggcggtcgtg
gcctttcacgcgggaaacttccgcgagctctaccacatactagagaaccacaaattcaca
aaggactcacacgcgaagctgcaggcgctctggctcgaggcgcactaccaggaggctgag
aaactccgtgggcgtcccttaggacccgtggacaagtaccgcgtccggaagaagtttcca
ctgcctcggacgatatgggacggcgaacagaaaacgcactgcttcaaggagaggacgcgg
catctcttgagggagtggtacctgcaggacccttacccgaacccgagcaaaaaaagagag
ctggcgcaggcgactggactcacacccactcaagtgggcaactggtttaaaaaccggagg
cagagagaccgagcggcagcggccaagaacaggctacagcagcaggttctgtccggtggc
tcggtccgatcgcttggggacgatgacaccacagtggaccgcctgggtcccgcctcaagc
ccagaagtcagtctctcgagcaaggccgccacctccgccatctccatcacctccagcgac
agtgaatgtgacatctaa
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