Cyprinus carpio (common carp): 109088448
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Entry
109088448 CDS
T05134
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109088448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109088448
Transporters [BR:
ccar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109088448
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109088448
NCBI-ProteinID:
XP_042627218
Ensembl:
ENSCCRG00000033597
UniProt:
A0A9Q9YVL5
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Position
A15:complement(17727222..17748558)
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AA seq
646 aa
AA seq
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MEMKQPMIMNREDGGEHEKEQESQENGRLVADSVAEKGQKSCSGPGQVSNGYPSTSPQSP
REGAGAGMDRGSTPGAFRTLVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYI
CYQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAICII
ALYIAFYYNTIMAWALYYLLSSFRATLPWTTCNNQWNTPNCTHYLSTDLNVSWTDNSISP
AQEFYIRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATF
PYLVLLILLIRGATLPGAWRGVVFYLKPDWGKLLTTTVWLDAAAQIFFSLGPGFGVLLAF
ASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQQGVETVAKDAGPSLLF
IIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVL
GLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQL
MLGFAPGVFWRVCWVAICPCFLLFIIGSFLAFPPEVKLFNYLYPFWTTVLGYCIGFSSFI
CVPSYMVYHLVTTKGTFKQRLLKSITPEASGSSGPQRDTIVITNAV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacaaccaatgataatgaaccgagaggatgggggagagcatgagaaggaa
caggagtcacaagaaaacggaaggctggttgcggacagcgttgcggagaagggtcagaaa
tcctgctctgggcctgggcaggtctccaacggttatcccagcacatccccacaaagcccc
agggaaggtgcaggtgctgggatggacaggggcagcacccctggggcattcaggactctg
gtggtccagcagaccagcttggatccacctagggagacctggagcaaaaagatggacttc
ttgctgtcggtgatcgggtatgcagtggacctgggcaatgtgtggcgctttccctacatc
tgctaccaaaatggagggggtgcctttcttctgccgtacctgctgatggctgtgtttggt
ggcgtgccactgttctacatggaactggctttgggccagtttcaccgcagtgggtgtatc
tccatctggaaacacatctgccccattttcaaaggtataggctttgccatctgcattatt
gcactctacatcgccttctactacaataccataatggcctgggctctctactacctcctg
tcctcctttcgtgccacgctgccctggaccacctgcaacaaccagtggaatactcccaac
tgcacccactacttgtccaccgacttgaatgtctcctggactgacaactccatctctccc
gctcaagagttctatatacggcaggtcttgcaggttcatctgtcccctggtcttcatcag
ctgggctgggtgagttggcagctagccctctgtctgttgttcatcttcactgttgtgtac
ttcagcatctggaagggggtcaagacctctggcaaggtagtgtgggtgacggctactttt
ccgtacctggtgttgctgatcctgttgataagaggggccaccctgccaggagcatggaga
ggagtggtcttctacctgaaacctgactggggcaaacttttaaccactacagtttggctt
gatgcagctgcacagatcttcttctctttgggtccaggctttggtgttctcctggccttt
gcgagctacaatccctttcataacaactgctacaaagatgcattgatcacaagctcagtg
aactgtttgactagtttcctatcaggctttgtgatcttcactgtgctgggctacatggca
gagatgcgccaacaaggtgtggagactgtagctaaagatgctggtcccagtctgctcttc
atcatctatgctgaggctattgccaatatgccagctgctacgttcttcgccatcatattc
ttcctcatgataattatgctggggctggatagcacgtttgcaggtctggaaggggtaatt
acagccatgttggacgagttcccccacctgttggccaggaggagagaatggtttgtgctc
ggccttgtgtgcgtctgttatttgggagccctctccactcttacctacggaggtgcgttt
gttgttaaactatttgaggagtatgccacaggccctgctgttatcaccgtagtcttcctc
gaggtcattgctgtttcctggttctatgggacaacacgtttctgcaacgacgtgcagctg
atgcttggctttgctcctggtgtattttggagggtctgctgggtagccatctgtccctgc
ttcctattgttcattattgggagtttcctggcattccctcccgaggtgaagctgtttaac
tacttgtaccctttctggaccacagttctcggctactgtattggtttctcctccttcatc
tgtgtgccttcttacatggtctatcatctagttaccaccaaagggaccttcaaacagcgt
ctactaaagagcattacccctgaggcttcagggtccagcggccctcagagagacacaatt
gtcatcaccaatgctgtgtaa
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