Cyprinus carpio (common carp): 109088578
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Entry
109088578 CDS
T05134
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109088578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109088578
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
NGL family
109088578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
LRRNT
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
109088578
NCBI-ProteinID:
XP_042570727
UniProt:
A0A8C1IHP2
LinkDB
All DBs
Position
A24:complement(22719635..22729678)
Genome browser
AA seq
724 aa
AA seq
DB search
MQAAMVTVLFSPSPLIWLVQLLLWPHLLGPRLAEASPACPALCSCSNQASRVICTRKGLN
EVPQSISSNTRYLNLQENTIQVIRSDTFKHLNHLEILQLSKNQIRHIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRWLDLGELRKLSFI
SEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSQISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLEQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETLETGQDGHDSARQFVNETFISIPGPT
AASASTGPTGSMLSSLSPRATRAPDHPFTVSITDIANLSGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPACAIEIINVEDEIGSSGGASGITGGSTIHTGAGSGG
GSGQSPRNHDPEIMTLPSVGQADHLNHYYKTHHFNNNILGLNMVSGMLNNKPNPSSQNQA
STMKMGISSDPSNPGSTSPPLPIPIPMAMTFHGTLKGLSHVPNLQTEPLLLSNGSKESVQ
ETQI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgctatggtaacagtccttttcagcccctcccccctcatctggttggtccaa
ctgttgttgtggccacacctccttgggcctagattggctgaagccagtcccgcctgccct
gctctctgtagctgttccaaccaagccagtcgagtgatctgtaccagaaaaggcttgaac
gaagttccacagagtatctcgtccaatactcgatacctcaacctccaggagaacaccata
caggtgatcaggtcagacaccttcaagcacctaaatcatctggaaattttacagttgtct
aagaaccagattcgtcatatagaagtgggagctttcaatggccttcccaatcttatcacc
ctggagctttttgacaatagactgccactggtaccatcacaggcgtttgagtacctgagc
aagctgcgtgaactctggctaaggaacaaccccatagagacactcccagcgtacgctttc
caccgtgtgccgtcactgcgatggttagaccttggcgagctgcgcaaactcagtttcatc
tcggaggctgcattcgaggggctgctgaacctacgtttcctgaatctaggcatgtgtggg
cttaaggatgtacccaacttgacgcctctcgtgcggctagaggaattggagctgtcagga
aaccaactgggtgtggtgcgtcctggatctttccaaggccttgtgtctcttcgcaaactg
tggctcatgcactctcagatctccgtcattgagaggaatgcctttgatgacctcaagaac
ctggaggagctcaatctgtcccataactctctgcattcgttgccccatgatctcttcact
ccactgcaacagttagagcgcgtccatctgaaccacaacccttgggtttgcaactgtgat
gttctgtggttgagctggtggcttaaagaaactgttcctgataactccacttgttgtgca
cgttgccatgccccaccgggtactaagggcaggtacattggtgacctcgagcagcgagac
ttcacctgctatgcacctgtgattgtggagccacccactgacctgaatgtgacagaggga
atggcagcggagctgaaatgccgcactgggacatccatgacttctgttaattggttgacc
cccaatggaaccttgatgacccatggagcctacaaggtccggatctcagtcctacatgat
ggaaccctgaatttcaccaacgtgaccatgcaagacacaggaccgtacacctgtatggtc
accaactctgctggcaacaccacagcaactgctgtgttgaacgtctctgcatctgaccca
ggcaacggctacagctacttcacaactgttaccgttgaaaccctagagactgggcaagat
ggccacgattcagcacggcagttcgtcaatgagacgttcattagtattccagggccgacg
gctgcatctgcatcaacaggtcccactggttcaatgctgtcctccttgtcaccgcgagct
acgcgtgcacccgatcaccctttcacggtctccatcacggacatcgccaacctctcaggt
cttgaggacgtaatgaagacgaccaagatcatcatcggttgctttgtggccatcaccttc
atggcggccgtgatgctggtcgtcttctacaagcttcgcaagcagcaccaactgcacaaa
caccacggcccggcatgcgccattgagatcataaacgttgaagatgagataggatcttct
ggtggggctagtggcatcacgggagggagcaccatccacacaggtgcaggatctggtgga
ggaagcgggcagagtccgaggaatcatgaccctgagatcatgaccctaccgagtgttggg
caagcggaccacctgaaccactactacaaaacgcaccactttaacaacaacatactgggc
ttgaacatggtttctggaatgctcaacaacaaacccaacccttcctcccaaaatcaggct
tcgaccatgaaaatggggatttccagtgacccctccaaccctggctcgacctcacctccc
ctaccaattcccatcccaatggcgatgactttccatggaactttgaaaggccttagtcac
gttcccaatttgcagactgagccgctgttgctatcgaatggctccaaggagagcgttcag
gaaacccagatctga
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