Cyprinus carpio (common carp): 109088645
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Entry
109088645 CDS
T05134
Name
(RefSeq) protein transport protein Sec24A-like
KO
K14007
protein transport protein SEC24
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109088645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109088645
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109088645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
109088645
NCBI-ProteinID:
XP_042567263
Ensembl:
ENSCCRG00000050181
UniProt:
A0A9Q9ZMT9
LinkDB
All DBs
Position
A21:21865452..21895389
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AA seq
978 aa
AA seq
DB search
MSSGGFASQNGAGGSHANGPSQNPVGVFSSNQGFMAPPQPGFNTLPTKDPGLYSSSRHQP
PPLGTPNHRSGLSGPPPSSNCYQLPQQPPQPQHPPHPQHPQQPLHPQHPPQPQHPPHPQH
PQQPLHPPPPQQPGWSPVPSAMHHSGSSAPPVFHNTMQPPAPSVNNAAVTAAAGQMHTYP
SLQAYQSVSGVQTPPAMSPPALTHTQLYTQPSAQLSPSLAALSLQSQPPEALRAINLLQE
RSLLPPGAVTPPVPCLPQDLQKLNCSPEVFRCTLTSIPQTQSLLNKAKLPLGLLLHPFKS
LSQLPVVTSSNIVRCRSCRTYINPFVTFMDPRRWKCNLCHRVNDVPEEFMYNPVSRSYGV
PHKRPEVQNATIEFIAPSEYMLRPPQPAVYLFVLDVSHNAVETGYLDVVCQTLLDSLDSL
PGDARTKIGFITFDSNIHFYNMQEGLSQPQMLIVSDIDDVFVPTPDSLLVNLKECRELVQ
DLLTSLPQMFGQTMETQSALGPALQAAFKLLSPTGGRMSVFQTQLPTLGIGALKPREEPS
QRANAKDVQHLSPATDFYKKLALDCSGHHVAVDLFLLSAQYSDLSSLGCISRYSAGSVYF
YPSYHKQHNPPQTERLQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLS
LPNVNPDAGFAVQMSIEENLLDLQTVSFQAALLYTASKGERRIRVHTLCLPVVNSLSDIF
AGADVQAITALLASMAVDRSVTASLSDARDALINAAIDSLASYRSSVLTVQQPGLLTPAC
LRLLPLYILALLKHKAFRAGGSTRLDERVFAMCQLKHQPLAYLMMMVHPGLYRVDELTDE
GALNINDRTIPQPRALQLSVEKLSGDAAFLMDCGTVMYLWVGRNCSPVFLTEVLGVPSYA
AVPLNMNQLPELDTARSSRLRAFVDWLREQRPFHPILHVIRDESPLKAEFMQNMIEDLSE
SALSYYEFLLHLQQQISK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcggcggcttcgcgtcacagaacggcgccggaggctcgcacgcgaacggtccg
tcacagaaccccgttggtgttttctcctctaatcagggcttcatggcaccgccgcagccg
ggcttcaacaccctgcccaccaaagacccgggcctctacagcagcagccgtcaccagcct
ccacccctcggcacacccaaccacaggagcggcctgtccggcccgccgccctccagcaac
tgctaccagcttcctcagcagcctccacagccccagcatcctcctcatcctcagcatcct
cagcaacctcttcatcctcagcatcctccgcagccccagcatcctcctcatcctcagcat
cctcagcagcctcttcatcctcctcctcctcagcagcccggctggagccccgtcccgtca
gcgatgcaccacagtggctccagcgctcctcctgtcttccacaacactatgcagccgccc
gctccctctgtgaataacgctgctgtgaccgcagcggcgggacagatgcacacgtacccc
tcactacaggcctatcagagtgtgtccggcgtgcagacgccccctgcgatgtctcctcct
gcgctcacacacacgcagctctacacacagccgtctgctcagctgagcccctcgttagcg
gcgttaagcctgcagtctcagcctccggaggccctgagggccatcaacctgctgcaggag
cggagcctgcttcctccaggagccgtgacgccgccggtgccctgtctgccgcaggacctg
cagaagctcaactgcagcccagaggttttccgctgtactctgaccagcatcccacagact
cagtccctgctgaacaaagcgaagcttcccctcggcctcctgctgcacccatttaaatct
ctcagtcagctgcctgtagtgacctccagtaacatcgtgcgctgccgctcctgtcggacg
tacatcaacccgttcgtgaccttcatggaccctagaagatggaagtgtaacctgtgtcac
cgagtcaatgatgttccagaggagttcatgtataatccggtcagcagatcgtatggagtg
cctcacaaaagaccggaggtgcagaacgccaccatcgagttcatcgccccgtcagaatac
atgctgaggccgccgcagcccgctgtttacctcttcgtcctggacgtgtctcataacgcg
gtggagaccgggtatctggatgtggtgtgtcagacgctcctggacagcctcgactcgctt
cccggagacgctcggacgaagatcggcttcatcacgttcgacagcaacatccatttctac
aacatgcaggaaggcctgtcgcagcctcagatgctcatcgtgtcagacatcgacgatgtg
tttgtgccgacgccggacagccttctggtcaacctgaaggagtgcagagagctggtgcag
gatctgctgacgagtctgccgcagatgttcggtcagacgatggagactcagtctgctctg
ggtccggcgctgcaggccgccttcaagctgctgtctcccaccggcggacgcatgtctgtg
ttccagacgcagctgccgaccctcggcatcggcgcgctcaagcccagagaagagcccagc
cagagagccaacgccaaggacgtgcagcatctcagtcctgcgacggacttctataagaag
ctggctctggactgttctggtcatcacgtggccgtggatctgttcctgctgagcgcacag
tactctgacctgtcctctctgggctgtatatccagatactcggccggaagcgtgtatttc
tacccttcataccacaagcagcacaacccgcctcagacggagcgcctccagaaggatctg
aagagatacctgacgcgcaagatcggcttcgaggccgtgatgaggatccgctgcactaaa
ggtctgtccatacacaccttccacgggaacttcttcgtgcgctccaccgacctgctgtct
ctgcccaacgtgaaccccgacgccggcttcgccgtgcagatgagcatcgaggagaacctg
ctggacctgcagaccgtgtccttccaggccgcgctgctctacaccgccagcaaaggagag
cggaggatccgtgtgcacacgctgtgtctgccggtggtcaactctctgtcggacatcttc
gctggagctgatgttcaggccatcactgctcttctggccagcatggccgtggatcgctcc
gtgacggcgagtctgagtgacgctcgtgacgctctgatcaacgcagccatcgactcgctg
gcgtcctaccgctcctcagtgctgaccgtccagcagcccggcctgctgacccccgcctgc
ctgcgtctgctcccgctctacatcctggccctgctcaaacacaaagccttccgggcgggc
ggcagcacccggctggacgagcgtgtgtttgccatgtgtcagctgaagcaccagccgctg
gcgtacctcatgatgatggtccatccggggctgtatcgcgtggatgagctgacagatgag
ggggctctgaacatcaacgatcgcacgattcctcagcccagagctcttcagctgtccgtg
gagaagctgagcggagacgcggcgttcctcatggactgcggcacagtcatgtatctgtgg
gtggggagaaactgcagcccggtgttcctcacagaagtgctgggagtaccgagctacgct
gccgttcctctcaacatgaaccagcttccggagctggacacggccagatcatcacgactg
cgagcgttcgtcgactggctgagagagcagcggccgttccaccccatcctgcacgtcatc
agagacgagtctccgctcaaggctgagttcatgcagaacatgatcgaggatctcagtgaa
tccgctctctcctactacgagttcctcctgcacctgcagcagcagatctccaagtga
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