Cyprinus carpio (common carp): 109088718
Help
Entry
109088718 CDS
T05134
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109088718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109088718
03036 Chromosome and associated proteins [BR:
ccar03036
]
109088718
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109088718
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109088718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
Lar_restr_allev
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
109088718
NCBI-ProteinID:
XP_042580300
Ensembl:
ENSCCRG00000051324
UniProt:
A0A8C1MT28
LinkDB
All DBs
Position
B5:12184366..12205880
Genome browser
AA seq
414 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYFWMEKR
HRGPGIAPGQLYTYPARRWRKKRRANPPEDPRLAFPSLKSELDLGLKKDVFSSDGSSLEA
LLKGEPVDKRSGLELRTVEEEPSSTEYSSGGLNPSGRVRKKILEPDDFLDDLDDEDYEED
TPKRRGKGKGKGRGVSSARKKLEAAAALEDRDRPYACDNTFKQKHNSKSSERVCGKRYKN
RPGLSYHYAHSHLAEEEGEEKDEMDIREPTPPQQDEPKTPKKGPDGLALPNKYCDFCLGD
SNLNQKTGQSEGLVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNMCGTSEND
DQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLALLKEKASIYQNQNAPPS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggtggagaatgttgtcaagctgctgggtgagcagtattacagggacgct
atggagcagtgtcacaactataatgcccgtctgtgtgcagagaggagcgtcaggatgccc
ttccttgattctcagacaggtgtcgcccagagcaactgctacttctggatggagaaacgg
cacagaggaccaggtattgccccaggtcagttgtacacatatccagcacgacgctggaga
aagaagaggagagctaacccaccagaggaccctcgtttagccttcccatctctgaagtcc
gagctggatctggggcttaagaaagatgttttctccagtgatggcagcagcttagaggca
cttctgaagggagagccagtggacaaaagatccgggttggagctccgcacagtggaagag
gagcccagctctaccgagtactcttccgggggactaaaccccagcggcagggtccgtaag
aaaattttggagccagatgattttctagatgatctggacgatgaagattatgaagaagat
actccaaagagacggggaaaaggcaagggaaagggtcgtggtgtcagcagcgctcggaag
aagttggaagcagcagctgctttggaggatcgagacagaccgtacgcttgtgacaacact
ttcaaacaaaagcataattcaaaatcttccgaaagagtctgtgggaagcgctataaaaat
aggcctggtctcagttatcattacgcccattctcacttggctgaggaggagggggaggag
aaagatgagatggacattcgcgaaccaactccaccccaacaagacgaaccgaagactcct
aagaagggcccagatggtttggctctgccaaacaagtactgtgatttttgtttgggagat
tccaacctgaaccagaaaaccggccaatcagaagggcttgtgtcctgctcagactgtggc
cgttctggtcacccctcgtgtctgcagttcactccagtgatgatggctgctgtgaaaacc
tatcgctggcagtgcattgaatgcaagtgctgtaatatgtgtggaacatcagaaaatgat
gaccagctgttgttctgtgatgactgtgaccgaggttaccacatgtactgcctctcgccc
cctatgtctgaacctcctgaaggaagttggagttgccatctgtgtttggccctcctgaaa
gagaaggcctctatataccagaatcagaatgcaccgccctcatga
DBGET
integrated database retrieval system
