Cyprinus carpio (common carp): 109088728
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Entry
109088728 CDS
T05134
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109088728 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109088728 (clasp1a)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109088728 (clasp1a)
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109088728 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
Vac14_Fab1_bd
Paxt-1_C
MMS19_N
HEAT_DAAF5
ParcG
TAN
MMS19_C
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
109088728
NCBI-ProteinID:
XP_042587590
UniProt:
A0A9R0A799
LinkDB
All DBs
Position
B9:23778355..23846738
Genome browser
AA seq
1633 aa
AA seq
DB search
MEPNIEYCLTQVLQKDVARRLQMGPELIDYITEADKCHDLESDQTALDKMVDGIATSWVN
SSNFKLALLGMDLLSALVTRLQDRFRPQVGTVLPSLIDRLGDAKDQVRDHDQTLLLKIME
LAATPQYIWDRMLVGFKHKNNRSREGVCLCLISTLNTYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMNCLVEIYRHVGEKVRIDLSKKGLPQSRLNVIFSRFDEVQRSGNMILSSGSDK
NFDDEDSVDGGRSSSSSSSKGFSNSRRGGSMGSMRRPSSASGSRAPGKDSVSAGAVDEED
FIKAFEDVPAVQIYSSKDLEDSLNKIREVLSDDKQDWEHRVTALKKVRSLLLAGATEHEG
FLQQLRLLEGALKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAENIMPTLLNLVPNS
AKIMATSGMAAIRLILRHTHFPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHTLE
RHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHFSREAEYLFQALESSYQKALQSHLK
SSDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGPVTRSKVISSRVSSTPGALQRSRSDI
DVNAASSAKSRMSTATSPSPFSSAAALPPGSYASLDGAPGKIDGRVRTRRQSSGSAVSAN
STVTDSRGRSRAKVVSQSQRSRSANPTSAGSRSSSPGKLLGHAYGRIPRATAPTTPSDKY
SRIPKSQGCSRETSPSRLGIARLCGKALLPATSSYRTLARSSRIPRPSMSQGCSRDTSRE
SSRDTSPARGFTPLASRRHSRSTSALSTAEPVGQSDRFGLIHQARISASVNAMRVLNTGT
EVEAAVADALLLGDSRNKCKPLRRRYESDDDANSDASSACSERSYSSRNGGIPHYLRQTE
DVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFS
MFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQ
FNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPADFVNSSETRLAVSRIITWTTEPK
SSDVRKTLHSWACEELSSRPSTTALLPGEGHLEERCKQAAQVVLISLFELNTPEFTMLLG
ALPKTFQDGATKLLHNHLKNSSNTSNVSSPSNTMGRTPPRHPTSRTSPLTSPTNCSHGGL
SPSRLWGWSVDGLLKHPSPSPPPPTPPSHSSIPAGPSLRAFRCALSPSMLEYDTENMNSD
EIFSSLRGVTEAIQSFSYRSQEDLNESIRRDGKKDDAAGKEGASPGSDARLGLDVMEGGR
TALDNKTSLLNTPSPRSFAVPRSREFAPYGYGDTITAYDKSALKEAVFDDDVDQFRDCRR
QDCGENKMVLPKGFTPDLVADLLKELSNHNERVEERKGALIELLKIAREDSLAVWDEHFK
TILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVR
AAEEAASTLASSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVVERIARESLHQLLPDI
IPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTN
SNSSSSSDVSSHS
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaatatagagtactgtctgacccaggttctacagaaggatgtggcccgcagg
ttgcagatgggtccggagctcatcgactacatcacagaggctgacaagtgtcacgacctg
gagagtgaccagactgcgctggataaaatggtggatggtatcgccacctcgtgggttaac
tccagcaacttcaagttggctttgttgggaatggaccttctatctgccttagtgacgaga
ttacaggaccgatttcggccccaagttggtacagttttaccgagcttgatagatcggtta
ggtgatgccaaagatcaagtcagagaccatgatcaaacccttctgctgaagatcatggag
ctggcagctactcctcagtacatatgggaccgaatgttggtggggttcaaacacaaaaac
aaccggagcagagagggagtgtgtctctgtctcatctcaactctgaacacatacggtgcc
caaggcttaaccctgagcaaaattgtaccacatatatgtaatctactcggagaccccaca
agtcaggttcgggatgcggccatgaactgccttgtggaaatatacagacatgttggagag
aaggttaggattgaccttagtaaaaaaggactgccgcagtcgaggttgaatgtaattttc
agcagatttgatgaagtccaaagatctgggaacatgatcctctcctcaggttcagataag
aactttgatgacgaggactctgtggatgggggcaggtcctcctcctcttcctcttctaag
ggcttctccaacagcagaagagggggcagcatgggctcaatgagacgacccagttctgcc
tctggatccagggctccagggaaggatagtgtcagtgcaggagctgtggatgaagaggat
tttattaaggcttttgaagatgtacctgcagttcagatttattccagtaaggatttggag
gactccttgaataagatccgtgaagttctgtcagatgacaagcaagactgggaacaccgt
gtcactgctctgaagaaagtgcggtcgctgcttctggctggtgcaacggaacatgagggt
ttccttcaacagctacggcttttagaaggtgccttaaagctgtcggctaaagatcttcgg
tctcaagtggtgcgagaggcctgtatcacattagggcatctgtcttcagtgctggggaat
aaatttgatcatggggctgaaaacatcatgcctacgctgctcaacttggtgcccaacagc
gccaaaattatggccacgtctggaatggcagccatccgcctcatcttgcgacatacacac
ttcccacgccttatcccgatcatcaccagcaactgcacttctaaatctgtggctgttcga
agacggtgttatgagtttttagacctgttattgcaagaatggcagacacacactctagag
aggcatgtggcagttctcactgagaccattaagaaggggatccatgacgctgactcagag
gccagatctgtggccagaaagtgttactggggattccatggccatttcagtcgagaggca
gagtacctgtttcaggcgttggagtcgtcctatcagaaggcactccagtctcacctgaag
agttctgacagtatagtgtctctaccgcagtctgaccgctcctcctcaagctcgcaggag
agcctcaatcgaccgctgtcagtgaagagtgtcattggaggccctgttacaagaagtaaa
gtgatcagctctagggtgtcctccacccctggtgccctccagcgttcccgcagtgacata
gatgtgaacgccgcctccagtgccaaatctcgcatgtccaccgcaacctccccatctccc
ttcagctccgctgcagctctgcctccaggctcttatgcctccctggacggtgcacctggt
aaaatagatggtcgtgtacggacgagaaggcagagctcagggagtgcggtcagcgccaac
agcaccgttacagacagccgtggtcgaagcagagctaaagtggtctctcagtcccaacga
tccagatcagctaaccccactagtgccggcagccgatccagttctccggggaagctcttg
ggacacgcgtatggcagaattcctagagccactgccccaacaactccctcagacaagtac
tcaaggatcccaaaaagccagggatgcagccgtgaaaccagccccagcagactgggcata
gccaggctgtgtggtaaagctcttcttcctgccacttcttcctatcgcacgctagcccgg
agcagtcgcatcccccgccccagcatgagtcaggggtgcagccgtgacaccagtcgcgag
agcagccgtgacacaagccctgctcggggcttcactcctcttgcctcccgacgtcactct
cgctccaccagtgcgctgtccacggccgaacccgtgggccagtcagatcgctttggcctg
atccaccaggctcgcatttctgcatctgtcaatgctatgagggtgctgaacactggcaca
gaagtggaggctgctgtggctgatgctttgctgttaggagactccaggaataagtgcaag
cctttgagaaggaggtatgagtctgatgatgatgccaacagcgacgcatccagcgcctgc
tcagagcgttcctatagttcccgtaacggaggcattcctcactacctgcgtcagacagag
gacgttgctgaggtgctaaaccactgcgccagttccaactggtctgagaggaaggagggc
ctgctgggtttgcagaacctgctaaagagccagcgcattctcagccgggtggagctcaag
aggctatgtgagatcttcaccaggatgtttgcagatcctcacagcaagagagtgtttagc
atgttcttagagactctagtggatttcatcaccgtgcacagagaggatctccaggactgg
ctttttgtactgctcactcagctgctgaagaaaatgggagctgacctcttgggctcagtc
caagcaaaggtccaaaaggctctggacgtcacaagggagtctttcccctttgaccagcag
tttaacattctaatgagattcattgttgatcagactcaaacccccaatctgaaggtgaag
gtggccatcctgaaatacattgagtccctggcacggcagatggaccctgcagactttgtg
aactcaagtgagacaagattagccgtgtctcgcattatcacctggaccacagaacccaag
agctctgatgttagaaaaactcttcatagctgggcatgtgaggagttgtcaagcaggccc
agcactacagctctactgcctggagagggtcaccttgaagagaggtgcaagcaggccgcc
caggtggtgctgatctcactctttgagctgaacactcctgagtttaccatgctgctgggc
gctctgcctaaaacattccaggatggagccaccaagctcctgcataaccatctgaagaac
tcaagcaacaccagcaatgtgagttcaccaagcaatacaatgggccgcacgccaccccgg
caccccaccagcaggaccagtcctctcacctcgcccacgaattgttcccacgggggtctg
tcacctagtcggttatggggttggagtgtcgatgggctcttaaagcacccttctccctct
cctcctcctcctactcctccgtctcactcctctattcctgctggcccctccctcagggcc
ttccgctgcgcactctctccaagtatgctggagtatgacactgagaacatgaattctgat
gagatctttagctcgctgcgtggtgtcacagaagccatccagagcttcagttaccgcagc
caagaggacctgaatgagtcaatcagacgcgatgggaagaaggatgatgctgctggaaag
gaaggggcatctccggggtctgatgcaagactgggattggacgtaatggaagggggtcga
actgctttggataataagacatctttacttaacactccgtccccgcggtcttttgctgtg
ccgcggtcaagagagtttgcgccctatggctacggagacacaatcacggcctatgacaaa
agtgccctgaaggaggctgtttttgatgatgacgtggatcagttccgagactgccgtcgg
caagactgtggtgagaacaagatggtgctgcccaagggctttactcctgatctggtggcg
gacctactgaaggagctgtctaatcacaatgaacgagtggaggagaggaagggggctttg
atcgagctgttgaagattgctcgtgaggacagcctggctgtgtgggacgaacacttcaaa
acaatcctattgctgctattggagacactcggggacaaggatcacactatccgagcgctg
gctttacgggtcctgaaggagattctgaggaaccagccagcacgcttcaagaactatgca
gaactcacaatcatgaaaacattagaagctcataaggactctcataaagaggtggttagg
gcggctgaagaggctgcctctacattggctagctccattcacccagagcaatgcatcaaa
gtgctgtgtcccatcgtacagaccgcagactatcccatcaacctggctgctattaagatg
cagaccaaagtggttgagcgtattgccagggagtcgctgcatcagctgctgccagacatc
atccctggtctcctacaaggctatgataacacagagagtagtgttcgcaaggccagtgtg
ttctgtctggtggccatctactctgtgattggtgaggagctgaagccacacttggctcag
ctcacaggtagcaagatgaagttgctaaatctgtacattaagagggcccagaccaccaac
agcaacagcagcagttcttcagacgtgtcgtctcacagctag
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integrated database retrieval system
