Cyprinus carpio (common carp): 109088852
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Entry
109088852 CDS
T05134
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109088852
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109088852
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109088852
Nuclear receptors [BR:
ccar03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109088852
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109088852
NCBI-ProteinID:
XP_042615953
Ensembl:
ENSCCRG00000052767
UniProt:
A0A9R0AZ04
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Position
A7:complement(17439119..17469215)
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AA seq
528 aa
AA seq
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MNMESPPESVASPRKSASEADASVEDSPVKLDSKAETDKPAPVRRQSCSSTNKDVSSAKK
THTSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQEEKVSDATEKGREP
QPPGEAEPLTPSYALSTNGATELPNDLSGYMNGQTPEEGKADSAIGGFYLDIQPSPDQSG
LDMDGIKLEPVCDLSPDSGLDQYCCYSNGHSSTPDNDLEHLSENICKSHMETCQYLREEL
QPSNWQTVLQTDVDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAYNSQNNTVFFDSRYAGPEVFKALGCDELISSVFEFAKSLTSLQL
SEDETGLFSAYVLMSADRSWLQEKTRVEKLQQKIKIALQNLLQNNQRDEGILAKLVCKVS
TVRMLCRHHMEKLNTFRALYPETVHTRFPPLYKELFGSEFEQVLPQEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagtctccgccagagtccgtcgcgtcgccgcgcaagagcgcttctgaagcg
gacgcttcggtggaggacagcccggtaaaactggacagcaaggctgaaaccgacaaacca
gcaccagttcggcggcagagttgctcaagtaccaacaaggatgtgtcctcagcaaagaaa
acacacacatctcagattgagagtattccctgtaaaatctgcggagataaatcatcaggg
attcattatggtgttatcacctgtgagggatgcaagggtttcttcaggaggagtcagcag
ggcactgtgtcttattcatgtcctcggcagaagagctgtctgatcgatcgtaccagcaga
aaccgctgccagcactgtcgcctgcagaaatgcttagcagtgggcatgtcaagagatgct
gtgaagttcggccggatgtctaagaagcagagggacagtctgttcgcagaggttcagaaa
caccgtcaacagcagcaggaggagaaagtgagtgatgcgacagagaaggggcgggaacct
caacctcctggagaggcagagccactcacgccctcttacgccctgtccaccaatggtgcc
acagaactccccaatgacctcagtggctacatgaacggtcaaaccccagaggagggaaag
gcggattcagcgattggtggattttacctggacattcagccctctccagaccagtcaggt
ctagacatggatggcattaaactagaaccagtgtgcgacctcagcccggactctggctta
gatcaatattgttgctatagcaacggacactcttcaactcctgacaatgacctagaacat
ctgtcagagaacatctgcaagtctcacatggagacgtgccagtatcttcgagaagagcta
cagcccagcaactggcagacagttttacagacagacgtggacgcgtaccaaaagaagtct
caggaggacatgtggcagctgtgtgcggttaaagtcactgaagctgtgcagtatgtggtt
gagtttgccaagcgcattgatggattcatggagctgtgtcagaacgatcagatcgtgctg
ctcaaagcaggttctttagaagtcgtgttcgtgaggatgtgtcgggcatataactctcag
aacaacactgtcttttttgacagcagatatgctgggccggaagtcttcaaagcattgggt
tgtgatgaacttatcagctctgtgtttgagtttgcgaagagcctgacctctctacagctc
agtgaagatgagactggcctgttttcagcatacgtgctgatgtctgcagatcgttcctgg
ctgcaggagaagaccagagtggagaaactccagcagaagatcaagattgccctccagaac
ctcttgcagaacaaccagagagatgagggaattctcgctaagcttgtctgtaaagtgtcc
actgttcggatgttatgccgtcaccatatggagaaactgaacacattcagagctctttac
ccagaaacggtccacacacgcttccctccgctctataaggagctgtttggatcagaattt
gagcaggttctgcctcaggaggcctga
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