Cyprinus carpio (common carp): 109088858
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Entry
109088858 CDS
T05134
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109088858
Membrane trafficking [BR:
ccar04131
]
Autophagy
Other autophagy associated proteins
Others
109088858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
109088858
NCBI-ProteinID:
XP_042607017
Ensembl:
ENSCCRG00000048538
UniProt:
A0A9Q9XS58
LinkDB
All DBs
Position
B23:complement(18148154..18166754)
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AA seq
726 aa
AA seq
DB search
MAELEVDQSNLPRVQEVCQCFAVLEDGALAHNLQEQEIEQYYNSNVQRSHLVQGDIRVAK
RLQDEEEQRAQMLQHQTTRQLEERDSEYARMIQEEIQRRSDEARRREVEDEEIAKRIQEE
EELYLRQRSSYQHKDGRESTSIPARPYLPRPVHVPHNRSPTRRWQHSSSPTYSDSEEDLI
EYSRPTVKRQDSKPPVGQRRLIGRPSEAHSEQDDKSMTSQGSSNRSSHLSGGWGDVIKLI
KNDMSEQGYLSHSSDDDLFEPVYKLEKILRQKQQVSGTGLSRHSSMREDRNRMWQGDGCG
LRESFRERHVHFLDERKRSNSYLANGFRTYENGHRDTRERVQCSVGMSREDHTQLKETQG
LHTQAQGFRRNISMRRSYHGNIRQTSVSEGSRTCSVDDSNLARQRPSNNAPSLQPRVPQL
MGLEVEDRLRDTRSWEMARSRNAWQRARSLTEDERRIDRDHRRDECRVRRSQSERCQTFE
EERSRTEEELERESRKEERRIQRLHSCSGRSSGAGPGLRGGRAALDLGSLEQVLLDEELA
RRLQEEEERLAEETEQGSSPLRRDCPIGDFKAAQVAQDEEIARFMQKQEIKAKRMSRELE
PVQEYRENDRTACDRQRQRLDSNGLQSPVDDFTPDNQHPSHVSMTVQPQAIRNIAEELDP
TFQRKDAAESGQNSCQNQTSQQVGLYSPLEEPTFVPPTKRHSDKLGRVKPKEKKENAKQK
DNCKQQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctggaggtggatcagtccaacctgcccagagtccaggaggtatgccagtgt
tttgctgtactggaggatggagctctagctcataacctgcaggaacaggaaattgagcag
tactacaactcaaacgtgcagaggagtcacctggtgcaaggagacatcagagtagccaag
agactccaggatgaggaggagcagagggctcagatgctgcagcaccagaccactcgccaa
ctggaggaacgagactcagaatacgcacgcatgattcaggaggagatccagcggcgttcg
gatgaagctcggaggagggaggtggaggacgaggaaatagcaaagaggatacaggaagag
gaagagctttatttgagacagaggagcagttaccaacataaagatggtagagagtccaca
agcattcctgctcgtccatacttaccccggcctgttcatgtacctcacaaccggtctcca
accagaagatggcagcactcctcctcgcccacctactcagactctgaggaggacctgatt
gagtacagtaggcctactgtcaaacgacaggacagcaaaccccctgtagggcagaggagg
ttgatcggcagaccttccgaagctcattcagagcaggacgacaaaagcatgaccagccaa
ggcagcagtaacagatcttcacacctgtcaggtggatggggtgatgtcattaagctcata
aagaacgatatgagtgagcaaggctacctcagccacagctctgatgatgatctctttgaa
ccagtctataaactggagaaaatattacgacagaagcagcaggtctcaggaacagggctg
agtcgacacagcagcatgagggaggatcgtaacagaatgtggcagggagacggttgcggc
cttagagagagttttagggaaagacatgttcatttcctggatgaacggaagcgctctaac
agttatcttgccaacggttttaggacctatgaaaatggtcacagggacactagggaaaga
gttcagtgttccgtagggatgtcaagagaggatcacacacaactcaaagaaactcaaggt
ctccacactcaagctcaggggtttcgacggaacatttcaatgcgacgtagttatcatggt
aacatcaggcagacatcggtgagtgaaggaagcagaacatgcagcgtagatgattctaac
ttggctagacaaagaccctcaaataatgccccctcactgcagcctagagtgccacagttg
atggggttagaagtggaggaccgtttgagagatacgagaagttgggagatggcaagaagc
agaaatgcatggcagagagctcgatcattaacggaggatgaaaggaggatagaccgagac
cacaggcgtgacgagtgtagagtgaggcgaagtcaaagtgagcgctgtcagaccttcgag
gaggagagatcgagaacagaggaagagttggagagggagagcaggaaggaggaaagacgg
attcaaagactccattcttgcagtgggcgctcttctggagcaggacctggtcttaggggt
ggaagggctgcgcttgacttgggaagtttggagcaagtgctgctagatgaggagcttgcc
cgcaggctgcaggaagaggaggagagattggccgaagagactgagcaaggttcctctcct
cttagaagggactgtcctattggagacttcaaagcagcacaggttgctcaggatgaggaa
attgcacgtttcatgcagaaacaggagataaaggctaaacggatgtctcgtgagctggaa
cctgttcaagaatacagagagaatgatagaacagcatgtgacagacagaggcagagactg
gattccaatggtcttcaatccccagttgatgacttcaccccagacaatcagcaccctagt
cacgtttccatgactgtgcaaccgcaagccatcaggaatattgcagaagagctggacccc
acctttcaaaggaaggatgcagctgaatcaggtcaaaattcctgtcaaaatcaaacttca
caacaagtaggtttgtatagccccttggaggaacctacttttgtgccccccacaaaacga
cacagtgacaaactgggacgagtaaagcccaaggagaaaaaggaaaatgcaaaacagaaa
gataactgcaagcagcagtga
DBGET
integrated database retrieval system