Cyprinus carpio (common carp): 109088987
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Entry
109088987 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109088987
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109088987
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109088987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
ResIII
TFIIS_M
EloA-BP1
EAD2
KIX_2
Motif
Other DBs
NCBI-GeneID:
109088987
NCBI-ProteinID:
XP_042576829
UniProt:
A0A9Q9W4S8
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All DBs
Position
B3:33732972..33753560
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AA seq
846 aa
AA seq
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MSAVHRALKTHFGFDKFRSQQQEDAVKAVLKGDRDVFVLMPTGAGKSLCYQLPALLASGI
TLVISPLIALIQDQVEHLKALNVPARSINSKLPSAERRQILADLESESPRLKLLYITPEM
VASPSFQPCLSSLCARGLLAYLAVDEAHCVSQWGHDFRPDYLKLGDLRSRLQGVPCVALT
ATAPKRVQEDIERSLKLRSPLVFTTPVFRKNLKYDVIFRDLLPDPYVHLLAFAKEALGGN
TAEKGCGIVYCRTRESCEEVAHKLTKLGIPAKPYHAGLKVGDRTESQTDWMADKVPVIVA
TISFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGLPSCCRIYYSPKDRDQLNFLI
RKEISRKQEKRGSEKEQDKAPLMDFEAMVAFCEQEGCRHATISQFFGNPKPNCAGACDFC
LGRRVLLVQVARGVVLGKLERVGHSEENRPGTAFNPELYAGGRKGYGFERYDEEWGSEED
DSEKRKKEFGDLFRKQMSLRRMSDVAKETFVPPDADCMLRDASSQRIPRLTVKSREHCLS
LLQECLTNHRGAAELSHSSDTLDQAVEIEHEIFRASKSANLYKASVLKRVSEMKKSAAAS
VAEEKQSESNEETATCSSSCQPLDGFTLASQVYSLKRKRVGAGFRGSSSLFQTAGDLLKN
SQKETLATNKTPGDPICEEEEQVETGKTQKMKSDSSPIKAKTSTTSPLSSPSKKLTKKQQ
KLAEAAKDMRRISQYFGKKQVDTPQTKAGSVISEPEEEGSQNHTPLPNHTDLITKNSTST
DEESVTAVLLQKSPSAEETASRDGTPINTEITADRAVHGENHESDAQRKSPKQVTPQLLF
IKGGTS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttcaccgggcgttaaagacacacttcggattcgacaagtttcgatctcag
cagcaggaagatgccgtgaaagcagtgctaaagggtgacagggatgtgtttgtcctcatg
cccactggagcggggaagtctctgtgctatcagctgcctgctcttctggccagtggcatc
actctggtcatctcgcctctgatcgcgctcatccaggatcaagtggagcacctgaaagct
ctgaatgttcctgcacggtccatcaactccaaactcccctcggctgagcggcgtcagatc
ctggcggatctggagagcgagagtcctcggctcaagctgctctacatcactccagagatg
gtggcgtccccgtccttccagccctgcttgagctcgctgtgtgcacggggtctgctggcg
tatctggctgtggatgaggctcactgtgtctctcagtggggtcatgacttccggccggac
tatctgaagctcggggacctgcgctcgcgtctgcagggggttccctgtgtagcgctgacg
gccacagcacccaagagagtgcaggaagacatcgagcgctcgctgaagctgcgctcgcca
cttgtctttaccacacctgttttccgtaaaaacttgaaatatgacgtgatattccgggat
ctgttgcctgatccttatgtgcacttacttgcatttgccaaagaggctctgggtggaaat
acagcggaaaagggctgtgggattgtttactgtcgcaccagagagagttgtgaggaagtg
gcgcataagctgactaaactaggaattccagccaagccctaccatgcagggctgaaggtg
ggcgatcgcacagagagtcagactgattggatggccgataaagtgcctgttattgtggcc
accatcagttttggtatgggagtggacaaggccaatgtcaggtttgtcgttcactggaat
ctggcgaagtctttggccagttactatcaggagtcgggacgagctggccgtgacggactg
ccgtcgtgctgcaggatatactactcacccaaagacagagaccagctcaacttcctcatc
cgcaaagaaatctcccgcaaacaggagaagcgaggatcagagaaagagcaggataaagcg
cctttaatggactttgaggcaatggttgctttttgtgaacaagaagggtgcagacatgcc
accatctcacagttttttggcaatccgaagcccaactgcgccggtgcgtgtgacttctgc
cttggccggagagtgttgcttgttcaggtggcgagaggagttgtgctcggtaagctggag
agggtaggtcatagtgaggagaaccggcccggcactgcgttcaaccctgaactctacgcg
gggggcaggaagggttacggcttcgagagatatgatgaggagtggggcagtgaggaagat
gactccgagaagaggaagaaagaattcggagatctctttaggaaacagatgagcctgaga
aggatgtcagatgtggctaaagagacgtttgttcctccagatgctgattgcatgttgagg
gatgccagcagtcagagaatccccagactcacggtgaagagcagagagcactgcctgtct
ctcctgcaggagtgtctgaccaaccacaggggggcagcagagctctcacacagctctgac
acacttgatcaggctgtagaaatagagcacgagatcttcagagccagtaaatcagcaaac
ctgtacaaggcttcggttctcaagagagtgtcagagatgaagaagagcgcagctgctagt
gttgctgaagagaaacagtctgaatcgaatgaagagacggcgacctgctcttcatcatgt
caacctttagacggcttcactttagcctctcaagtctactcactgaagaggaagcgtgta
ggagcgggatttcgtggctcgtccagcctgtttcagacagctggagatctgctgaagaac
tctcagaaggagacgcttgccacaaacaaaacacctggagacccaatctgtgaggaagag
gagcaggtggaaacaggaaaaacacagaagatgaaaagcgactcgtctcccattaaagcc
aaaaccagcacgacttcccccctgagcagccccagtaaaaaactcactaagaaacagcag
aaactagcagaagcggccaaagacatgcgccgcatatcacagtattttgggaaaaagcaa
gtggacacccctcagacgaaagcaggaagtgttatatcagagcccgaggaagaaggatct
cagaatcacactcctttaccaaatcacaccgacttaataacaaagaatagcacgtctaca
gatgaagaaagcgtcactgctgttctcctgcaaaagagcccatctgcagaagagacggcc
agccgagacgggacgcccatcaacaccgagatcacagcagatcgagcggttcacggagag
aatcacgaatctgacgcccaacgaaaatcaccaaaacaagtaacaccacaattactcttt
atcaaagggggcacatcatga
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