Cyprinus carpio (common carp): 109089989
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Entry
109089989 CDS
T05134
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109089989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109089989
03036 Chromosome and associated proteins [BR:
ccar03036
]
109089989
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109089989
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109089989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109089989
NCBI-ProteinID:
XP_042579320
UniProt:
A0A9Q9W9J7
LinkDB
All DBs
Position
B5:4703811..4726799
Genome browser
AA seq
1731 aa
AA seq
DB search
MSAEVLRPGPVAGGGSKLGELIGKLHEYLAAATEDQTEATLPGHWNGATAKEYLERQARA
QSSGASEVGMLSSRSRRKPAVVTKHSGMNESDASSESGAEDVMSVHSSDPDTNVLPKGTV
FVLPEPVGNETRDDFRGPEFRSRRVHKQHREGGDRRRGGYEIERVNCTACGQQVNHFQRD
SVYRHPMLNVLICKNCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCKKCV
LRNLGRKELSTILEEERKWYCYVCSPEPLVELVLACDAVLENLEQAQKRASRTEPNSVRG
RANKGGRGSAYLMGPGGGPVPSAGLYQRMQRFVDVTTSLSHSFKAVVQSEREEEVNQEER
IGQLRMFRTVLDDLQAANSALQEALDHELTGGPGLAVVDLVVGVSPVPVSPQPISRTCLS
IHPSPERQTINSEVTDAALEERETMVEIEKGMEMEEMTERGEDVENDCVNNDEEEEEEEE
EDEEDEDQTDAKNMSLSEENKRSPRVKTTPRRRRTNPSTPAEHAGSAEDDSDSDEVPEVL
LQTAAAMANSEEEGLVGGSWDGDGDEVNQQVRKQRLFGLVKTTPPDRGSRKRNLKERSSS
SSSSSSASSRRGSQDQGSAVRMTRGRDRKVARVTGQSGSSSSEVGGQELESGPSSDSDDQ
RIKPLTGDVTLLGSGNFQQSSGDEMDIQPGPSLSVEDDDLENRIAKKILLAQIRANLSSA
SEQDASSDEQSESTREEQKKNKNIDRTSETTEEEDNDDSDCSGSQSGSRHRHRLLRHGLT
LSEAEAKSQKQEVKKPKKREVKDLECVIVSSDETSETSVSSGVYEELSHSECEEIGSQSP
THNEKCQSPSRTPDRSSTADNDVSPTTDEHLRGTPRGRRQIRPLLEVGQLAQETQSALKE
EEERRRRLAEREKLRLEIERREREDADPEVILVSEKPAQSFTPLVLEQDDVTHKPVLQVH
LHFLSKLKPHQQEGVRFMWDCCCESVQSVKTTPGSGCILAHCMGLGKTFQVIVFLHTVLL
CKELPLKRALVVCPLNTVLNWRSEFDQWQRGLRPNILWVAELATVKSVSVRVELMNDWFT
NGGVMIMGYEVFRILTHTDSAKYSKHKEAFRSMLLDPGPDLVVCDEGHILRNADSSISKA
MRALRTRRRIILTGTPLQNNLTEYHCMVNFIKENLLGSLKEFRNRFINPIQNGQCADSTP
ADVRLMKNRSHVLHQMMSGFIQRRDYSVLMSCLPPKHEYVLLVRMTPLQCRLYTHYLQNY
TGKGAGVNSLFQDLHVLSLIWTHPWCLKLAQLSRNKGKEEEPAPVFTGLGAGLVSNSVNP
NESERRDATSTGLVGDGERNTDPVSLGSRSNQNPQNPDVTNPATMEISGREAGFVVGNGP
SADWYLPFITAADAKVLEHSGKLQLLLEILHWAEELQDKVLVFSQSLISLDLIESFLLYA
DETRGEKCCPYKGEKTWVKNKDYYRLDGNTSACARKRWAQEFNNTKNIRGRLFLISTRAG
SLGINLVAANRVVVFDACWNPSYDIQSIFRVYRFGQKKTVYVYRFLAQGTMEQNIYERQV
AKQSLSSRVLDQQQIQRHFTHSQLNELYHFQPNLRPSKHTETPVDDLLAQLLQSCGQLIV
SYHEHNSLLGHREEEELSEEERRAAWDEYRAEKKASIQNSNDLIHTNANQAVQQALASLN
LAYTTKSVPSPASSHMKQGNAEGSAAWVTYNNSNTTFRPPNVVFSVPRTNT
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaagttctcagacccgggccggtggccggtggaggcagcaagctaggtgag
ctgatcgggaagctccatgagtatctggcagcagccacggaagaccagactgaagctact
ttacctggacactggaatggagccacggccaaagaatacttggagcggcaggcacgtgcc
cagtccagtggcgcctcagaagtgggaatgctgtcatctcgttcaagaaggaaaccggct
gttgtcaccaagcacagcgggatgaacgagtcggacgcttcgtctgagagtggagcagaa
gatgtaatgtctgtgcactccagcgacccagacaccaacgttcttccaaaaggaacggtg
tttgtgttgccggagccggtgggtaatgaaactcgtgatgatttccgtggtccagaattc
cgcagtcgacgcgttcacaagcagcacagagaaggtggtgacagacgcagaggaggatat
gagatagagagggtgaactgcacagcgtgtggtcagcaggtgaatcatttccaacgcgac
tcagtctacaggcatcctatgctcaatgtcctcatctgcaagaattgttttaagtattat
atgagtgatgacatcagcaaagactcagaggggatggacgagcaatgcaggtggtgtgca
gaaggaggcagcctaattggctgtgattactgcagtaatgccttctgtaagaaatgtgtt
ctgcgtaacctggggaggaaggagctgtccaccatcctggaggaggagaggaagtggtac
tgttatgtgtgcagtcccgagccattggtggagctggttttggcctgtgatgcagttcta
gagaacctggagcaggctcagaaacgagcctcccgtactgagccaaactcggtccggggc
agggctaataagggtggtcgtggatcggcctatctgatggggccaggaggcggcccagtg
ccctctgcaggcctttaccagcgaatgcagcggtttgtagatgttaccacatctctgagc
cattccttcaaggcagttgttcaaagcgaaagagaggaggaagtaaaccaagaagagaga
attgggcagctaagaatgttccgcactgtgctggatgatctgcaagccgccaacagtgca
ttacaggaagccctggaccatgagctgactgggggtcctgggttggctgtggtggatttg
gtggttggtgtttctcctgtaccggtcagcccacaacccatcagcagaacatgtctttcc
attcatccatcacctgagagacaaacgataaacagtgaggtgacagatgcagcactggaa
gaaagagagacaatggtggagatagagaaggggatggaaatggaggaaatgacagagaga
ggagaagatgtggaaaatgattgtgttaataatgatgaggaagaggaggaggaggaggaa
gaagatgaggaggacgaggaccaaactgatgccaaaaatatgtctttatcagaggagaat
aaacgatctccacgtgtgaaaaccacaccacgtcggcggcggacgaacccgagcacccca
gctgagcacgccggttcagctgaggatgactctgactctgacgaggtgcctgaagtgctg
ctccagactgccgctgccatggcaaacagcgaggaagagggtttggtaggtggcagttgg
gatggggatggggacgaggtaaaccagcaagtcagaaagcagcgtctctttggactggta
aaaacgacacctccggacagaggctctcgtaagcggaatctcaaagagagatcttcatcg
tcctcatcgtcctcctctgcgtcttcaaggaggggctcacaggaccaggggtcagctgtc
agaatgaccaggggaagggaccgcaaagttgccagggtgacgggacagagtgggagttca
tcaagtgaggtgggaggacaggaactggagagtgggccgagcagcgactctgacgatcag
aggatcaagccactgacaggggacgtcacgttgctgggctctggaaatttccagcagtct
tccggtgatgagatggacatccagccaggtccgtctttgtctgtggaggacgatgattta
gaaaatagaattgcgaagaagattctgctggctcagatcagagctaacctctcctcagcg
tccgagcaggatgccagctctgatgagcaatcagagagcacgagagaagagcagaagaag
aacaagaacattgacagaacatcagagacaacagaagaggaagataatgatgactcagat
tgcagcgggtcgcagtcagggtcacggcaccggcaccgattgctgcgacatggtcttacc
ttatcagaggctgaagcaaaaagtcaaaagcaagaggtgaagaaacctaagaaaagagaa
gtcaaagatttagaatgtgttattgtgagtagtgatgaaacgagcgaaacgagtgtatcg
agtggcgtgtatgaagaactcagccattcagagtgtgaggaaatagggtcccagtcgccc
actcataatgagaagtgtcagagtccgtcacgcacacctgacaggagcagcactgctgat
aatgatgtctctccaaccactgatgagcatttgaggggcaccccgcgagggcggaggcag
atcagaccgctcctagaggtgggtcagctggcccaggagacacagagcgctctgaaagaa
gaggaggagcgcaggaggagattagcagagagagaaaaactgaggctagaaattgagagg
agagaacgagaagacgcagacccagaggtcatattagtgtccgagaaaccggctcaaagc
ttcacaccattggttctcgagcaagatgatgtaacgcataagcctgtgctgcaagtgcac
ttgcactttctgagcaaactcaaaccacaccagcaagagggtgtgcgcttcatgtgggac
tgctgctgtgagtctgttcagagtgtgaagacgactccaggctctggctgtattctggcc
cactgcatgggtctgggaaagacctttcaggtcattgtgttccttcacacagtgctgcta
tgtaaagagctgccactgaaaagggctctggtggtgtgtcctctcaacacagtgctgaac
tggaggagtgagtttgaccagtggcagaggggcttgaggccaaacatactgtgggtggca
gagctggccacggtgaagtctgtgagcgttcgtgttgagctcatgaatgactggtttacg
aatggtggtgtgatgatcatgggctatgaggtttttcgtatactgacacacacagatagc
gcgaaatacagcaaacacaaagaagccttccgctcaatgctcctggatccaggccctgat
ctggtggtgtgtgacgagggtcatatccttaggaatgcagactccagcatctcaaaagcc
atgcgagctctacgtacacgtaggagaatcatactgacaggaacaccacttcaaaacaac
cttaccgagtatcactgcatggtgaacttcattaaggagaacctgctgggttctctaaag
gagttccggaaccgttttataaatccgatccagaatggtcagtgtgcagactccacccct
gctgatgtcagactgatgaagaatagatcgcacgtcctccatcagatgatgtcaggattc
atacagagacgggactactcagtcttgatgtcctgtttgccgccaaaacacgagtatgtg
ctgttagttcggatgacgcccctgcagtgtcggttatacacacactatctgcagaactac
acagggaaaggagcaggtgtgaacagtttgtttcaggaccttcatgttctgagtttgata
tggactcatccctggtgtcttaaacttgctcagttgagcaggaataaggggaaagaggaa
gagcctgctcctgtcttcacaggtctgggtgcaggtttggtcagcaattctgtaaatcca
aatgaatctgaaaggagggatgcaacaagcacaggtttagtgggtgatggagagagaaat
actgatccagtctccttgggcagcaggtccaatcaaaatccacagaatccagatgtcaca
aacccagccacaatggaaatttctggcagggaagctggatttgttgtgggtaacgggcca
tctgccgactggtatctgccatttataacagcagctgatgccaaagtgctggagcattct
gggaaattgcaattgctactggagattttacactgggcagaggaactacaggacaaagtg
ttggtgttcagtcagtctctgatatcgctggaccttattgagagtttcctcctatatgca
gatgagaccaggggggaaaaatgttgtccatacaaaggagagaaaacatgggttaaaaat
aaagattattatcgtttggacggcaacaccagtgcttgtgctcgcaagagatgggctcaa
gagtttaacaacactaaaaacataagaggaaggttgtttctgatctccactcgtgcgggg
tctctgggaatcaatctggtcgctgcaaaccgggtcgtggtgtttgacgcttgctggaat
ccgtcatatgacatccagagcatcttcagagtctatcgctttgggcagaaaaaaacagta
tatgtgtaccgttttctggcccaggggaccatggaacagaacatttatgagcggcaagtt
gctaaacagtcactgtcctctcgtgttctggaccagcagcagattcagagacacttcaca
cacagtcagctgaatgagctgtaccacttccagccaaacctacggcccagtaaacacaca
gaaacgcctgtggatgacctgttggctcagctgctgcagagctgtgggcagctcatagta
agttatcatgagcacaactcattgttaggccaccgggaggaagaggagctgagtgaggaa
gagcgcagagcagcctgggatgaataccgtgcagaaaagaaggcctctatacagaactcc
aatgacctcatccacacaaacgccaaccaggcagtacagcaggctctggcttctctaaac
ttagcctatacaaccaagagtgttccttcacctgcttcatcacatatgaaacaaggcaat
gctgaaggttctgctgcttgggtcacttataacaactccaacaccacatttcgaccaccc
aatgtggttttctcagttccaagaacaaacacataa
DBGET
integrated database retrieval system
