Cyprinus carpio (common carp): 109090134
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Entry
109090134 CDS
T05134
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03440
Homologous recombination
ccar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109090134
03460 Fanconi anemia pathway
109090134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccar03032
]
109090134
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109090134
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109090134
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Topoisomerases
109090134
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109090134
FA (Fanconi anemia) pathway
109090134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Fer4_11
Motif
Other DBs
NCBI-GeneID:
109090134
NCBI-ProteinID:
XP_042579028
UniProt:
A0A9Q9W8Z0
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Position
B5:30156022..30171051
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AA seq
861 aa
AA seq
DB search
MRTVFMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYTGSFMGQNVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEAKGCDYVVLWLDCDK
EGENICFEVLDAIQPLMNKSYGSDRTVYRAKFSSITDTDICNAMNQLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEAY
WVIQAKVFKGKDSPLTLDWDRVRVFDRDVGQMFVNMAKTAKEAKVDSVSMKEKAKQRPLA
LNTVEMLRVGSSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQANN
SFWGETVKALLSEGINRPRKGVDAGDHPPITPMRAASESELGSDGWRLYDYITRHFIATV
SPDCKYLQTTISFSIATEGFTCSGKTLISAGYTEVMPWQGIAQEEALPVCERGDTFTVDE
IKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRKLKPTNL
GIVLVHGYYKIDADLVLPTIRSAVEKQLNLISLGKANFQQVLQHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELKCPLDEFELVLWTSGSRGKSYPVCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECETGVLVFDPTSGPKWRMACNKCNVVVHFFEHAHKVQVSQDSCDSCEASLVI
VDFNKTRSLLPDGETQHTGCVFCDPVFQDLVELKHATMRHPMHRAGGARRGRGKGRGRRP
VGRGNPKKPKDKMAALAAYFV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtgtttatggtggctgagaagccctctctggctcagtccattgccaaaatc
ctctctaaaggtagctgttcctcccgaaaaggcctgaatggagcatgttcagtccatgag
tacacgggaagcttcatgggccaaaatgtgaggttcaagatgacgtcagtgtgtggacat
gtcatgagtctggacttcatcggaaagtacaacaactgggataaagttgatccagctgag
ttgttcagtaaagctccgactgagaagaaagaagcaaaccccaaactaaatatggtcaaa
ttccttcaggttgaagcaaaaggttgtgactatgttgtcctgtggttggattgtgataaa
gaaggagagaacatttgttttgaggtgttggatgccattcagccgctgatgaataagtct
tacggtagtgatcgaaccgtgtatcgagcaaagttcagctccatcacagacacagatatc
tgtaacgccatgaaccaactcggagaacccaacaggaacgaggctctgtccgtagatgct
cgtcaggaactggacctcaggattggctgtgctttcacacgtttccagactaaatacttc
caggggaaatatgggaatctggactcctctttgatctcgtttggtccctgtcagactccc
acattgggattctgtgtggaacggcacgacaagatccagtccttcaaacctgaagcatac
tgggtcatacaggcaaaggtttttaaaggcaaggacagtccactcaccttggactgggac
cgcgtgcgagtttttgaccgagatgttggtcaaatgtttgtaaatatggcaaagactgct
aaggaggctaaagttgactcagtgtctatgaaagagaaagccaagcagagacccctcgcg
ttgaatacagtggagatgttaagagtgggcagctctgctttgggaatgggtccccagcat
actatgcagatagcagagcgtctctacacacagggttatatcagctaccctcgcacagag
accacacactaccctgaaaactttgacctgaagggcaccctcaaacagcaagccaacaac
tccttctggggtgaaacggtaaaagccctgctctctgagggcattaacaggccaagaaag
ggagtggacgccggagaccatccaccaattacacccatgagagccgcctctgagagcgag
ctgggcagcgatggttggcgtttgtatgattacatcacacggcacttcatcgcaacggtc
agccccgactgcaaatacctgcagaccacgatttccttcagcatcgccaccgagggcttc
acatgcagcgggaagacgctcatctctgctggttacactgaggtgatgccctggcagggt
attgcacaggaagaggccttgccggtgtgtgagagaggagacacatttacagtggatgag
atcaaactactggagaaacagaccaatccaccagactacctgactgaggccgagctcatc
acactcatggagaaacacggcatcggtacggatgccagcatccctgtccacattaacaac
atctgccagaggaactatgtgacggttgaaagtggccgcaaactcaaacccaccaacctg
gggattgttctggttcatggctactataagattgatgcagatttggtgctaccaacaatc
cgcagtgctgtggaaaaacagcttaatctgatatctttaggaaaggcaaacttccagcag
gtcttacagcacactctggacatcttcaagaggaagtttcactactttgtggactccatt
gcaggaatggatgagctgatggaagtgtccttttctcccatcgccgctactgggaaacct
ctctcgcgctgtggcaaatgccatcgcttcatgaagtacatccaggccaaacccagtcgc
ctgcactgctctcactgtgacgagacctacagtttgcctcagaatggagccattaagctg
tacaaggagctcaagtgtcctctggatgagtttgagctggtgctgtggacctcggggtct
cgtggcaaaagctaccctgtgtgtccatactgcttcagcaaccctcccttcagagacatg
aagaaagggatgggctgtaatgagtgcacccacccttcctgtcagcactccctcaactct
cttggcatcggccagtgcgttgaatgtgagacgggcgtcctggtcttcgatcccacctcg
ggtccaaagtggcgcatggcttgcaacaaatgcaacgttgtggtgcatttcttcgagcac
gcccataaagtgcaggtgtcccaggacagctgtgattcctgcgaagcctccctggtcata
gtggacttcaacaagacacgctcgctgttgcctgatggcgaaacgcagcacactggctgt
gtgttttgtgaccctgtgttccaggatctggtggagctgaaacatgcgaccatgcggcat
cccatgcaccgggccggaggagcccgcagagggagagggaagggaagagggaggaggcct
gtggggagagggaatcctaaaaagcctaaagataaaatggcagccctggcagcatatttt
gtatag
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