KEGG   Cyprinus carpio (common carp): 109090149
Entry
109090149         CDS       T05134                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109090149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109090149
Spliceosome [BR:ccar03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109090149
 Complex B
    109090149
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 109090149
NCBI-ProteinID: XP_042580267
Ensembl: ENSCCRG00000009210
UniProt: A0A9Q9ZZY8
LinkDB
Position
B5:11915246..11928180
AA seq 874 aa
MADKKGKSVGVKKTLTKREQEEMKKKEEEKAAEVFEEFIASFDTNDKTGVKTFVRGGIVN
ATKEEEAAEVKKSKLYRPASKFTSPPENTSPVQPADVKKTTVKKKVEEKKKSNLELFKEE
LKQIQEEREERYKKKKGDSGGVYPDLDLPLTRRSIFDDDPAVPNTTNLYIGCINPKMTEE
MLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTIMGFEM
KLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKSRSRSQEDFYK
TLSEAVVTVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSREKNNPDFRFLFDNKSQEH
VYYRWKLYSILQGENPNKWRTSPFRMFRGGSLWKPPLLNPYLHGDEEPEESSFPSQEEEP
KKGHLKAEHRERLEALLRGLTPRRDEIGDAMLFCLERAEAAEEVVSCITESLSIAHTPLQ
KKIARLYLISDILYNSCAKVANASYYRKFFETKLPQIFGDISEAYRNIQARLQAEQFKQR
VMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIDRAEPKSPDLDGVPLDGIPLERG
EIDGAPLDDLDGSPLTWDPSSIDGVPVDDIDGVPLGNPIDDIDGVPFDEGSDKTLPAVAL
SKWEKVEDSESSAKNDSDTEVNSSGLKENDGNSDMSSDEADSPSRYEGAEFKSSLRNFEL
SESKRTRLRELEVKVMNFQDELESGKRQRKSSMTLQQQVQHYRNRLLQKEFDKDDQEKRD
KYSQKQKDRSKKDERRDKGEDRSKTRDKEKTRKSEDRDRSRGRSRDKEERRERTRSRSPR
KSKRSRSPSPQHKSWRSSSRSPHHSHKKSKKSKH
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggcagacaaaaaagggaaatcagtgggggtgaagaagacgctaacaaaaagagagcaa
gaggaaatgaagaaaaaggaggaagaaaaagctgctgaagtctttgaggaatttatagct
tcttttgacactaatgacaaaactggagtgaagacatttgtacgaggaggcattgtaaat
gcaactaaagaggaagaagccgcagaggtgaagaagagcaaactctacagacccgcctct
aaattcacttctccaccggagaatacctcacctgttcaacctgcagatgttaaaaaaact
accgttaaaaagaaagtggaggagaagaaaaagagtaatctggagctctttaaagaggaa
ttaaaacaaatacaggaggaaagagaggagcgatataaaaagaagaaaggtgactctgga
ggagtgtacccagatctggatttacctctgacacgacgatcaatatttgatgatgatcct
gcagtgccaaacacaacaaacctgtacatcggctgcatcaaccctaagatgacagaggag
atgctctgtaaggagtttgggaaatacggacctctggccagtgtgaagatcatgtggcct
cgcactgaagaagagagaacaagagtcaccaaccgtggttttgttgctttcatgacacgg
aaagatgcagagcgtgctttggctgcactggatggtaaaacaataatgggttttgaaatg
aagctaggttgggggaaggcagtacgtatacctccgcaacctctgtacacccccattggg
gtgctgaagaccactgccccccctccaccatctgggctgccattcaacgcccaacccaga
gaccgcttcagaaatgacttcaccaaatcacgcagccggtcacaggaagacttttacaag
actctgtccgaggccgtagtgacagtggtaatccccacagaaaggaacctgctgggcttg
atacacagaatgattgagtttgtggtaagagagggacccatgtttgaggccatcatcatg
agcagagaaaagaacaaccctgacttcaggtttttatttgataataaaagtcaggagcat
gtgtactacagatggaaactctactccattctacagggagagaacccaaataaatggaga
acgtcacctttcagaatgttccggggcggctctctgtggaagccacctcttcttaaccca
tatctccatggtgacgaggaaccagaagagagctccttcccttctcaagaggaagagcca
aagaaagggcacctgaaggcagagcacagagagaggttggaggccttgctaagagggctg
actcctcgcagggatgagatcggtgatgcaatgctattctgcctggagagagcggaggct
gctgaggaggtcgtctcctgcatcactgaatctctgtctatagcacacacaccactgcag
aagaagatcgccagactttatctaatatctgacatcctctacaactcctgtgccaaagtt
gcaaatgcgtcatattaccgtaaattttttgagacaaagctgccgcagatatttggagac
atcagtgaagcgtatcggaacatccaggcccggctccaggcagagcagtttaagcaaaga
gtcatgggatgttttcgtgcgtgggaagactgggcagtttatcccgactccttcctgatc
caactgcagaatatattcctggggcttattaaacccggagaggaagtcattgacagagca
gagcccaaatctcctgatctagatggggtcccattggatggtattcctctagagagaggt
gaaattgatggtgcaccccttgatgaccttgatggatcacctttgacctgggatccgtcc
tctatagatggtgtaccggtggatgacatagacggtgttcccctaggaaacccaatagac
gatattgatggtgtgccatttgatgagggctcagataagactttacccgctgttgcactg
tctaaatgggagaaggtggaagattctgaatcctcagccaagaatgactcggacacagag
gtgaattcaagtggcctgaaggagaatgatggtaactcagatatgagcagtgatgaagct
gacagccctagcaggtatgagggggcggagtttaagagttctctgagaaattttgaactg
tctgaaagcaaaaggacacgcctccgagaacttgaggtgaaggtgatgaatttccaggat
gagttggagtcgggtaagagacagaggaagtccagtatgactctccaacagcaagttcaa
cactacagaaacagactgctgcagaaggagtttgacaaggacgatcaggaaaagagagac
aaatattcacaaaaacagaaagaccggtccaaaaaagacgagcggagagataaaggggag
gacaggagtaaaacaagggataaagaaaaaactagaaagagtgaggacagagataggagt
agaggacggagtcgagacaaagaagagagaagagagagaacaagatcccgatcaccacgc
aagtcaaaacgctctcgatcaccatcaccacagcacaaatcctggaggtcatcatcccga
tcaccacatcactcacacaaaaagagtaagaagagcaaacactga

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