Cyprinus carpio (common carp): 109090227
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Entry
109090227 CDS
T05134
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109090227
03041 Spliceosome [BR:
ccar03041
]
109090227
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109090227
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109090227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109090227
NCBI-ProteinID:
XP_042579769
Ensembl:
ENSCCRG00000014207
UniProt:
A0A8C1L437
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All DBs
Position
B5:complement(5471721..5478993)
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AA seq
342 aa
AA seq
DB search
MMMDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIFDTAGNDPYCFVEFYENRH
AAAALAAMNGRKILGKDMKVNWASMPGSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPF
GKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPSAP
KPNNEAASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE
KGYSFVRFDSHEGAAHAIVSVNGTCIEGHIVKCYWGKETADMRSMQQMQMPQQNKPTYAA
QPYGQWGQSYGNGQQMGQYMPNGWQMPTYNVYGQAWNQQGYK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggacgaggaccagcccaggacattgtatgtcgggaacctctccagggacgtt
acggaggccctcatcctgcaagtgttctcccagatcggcccctgcaagagctgtaaaatg
atatttgatacggctggaaatgacccgtactgctttgtggagttctatgagaacagacat
gctgctgcagctttggctgccatgaacggcaggaagatcttaggaaaggatatgaaggtt
aactgggcctcaatgccaggcagtcaaaagaaagacacaagcaatcatttccacgtcttt
gtcggtgacctgagcccagaaatctcaaccgatgatgtcagagcagcctttgctccgttt
ggaaagatatctgacgcccgtgtggtgaaggatctggccacaggcaaatctaaaggatac
ggtttcatctcctttattaataaatgggatgcagaaaatgccattcagcaaatgaatggc
cagtggctaggaggcagacagatcagaacaaactgggccacaaggaagccatcagctcct
aaaccaaacaatgaagcggccagcagcaaacacttgtcctatgaggaggtcctgaaccag
tcgagtccgagtaactgcaccgtgtattgtggcggcattgcttctggcctttcagatcag
ctgatgagacagactttctctccgttcgggcagataatggagatcagggttttcccggag
aaaggctactcatttgtgaggttcgactctcatgagggtgccgcccatgccatagtgtct
gtaaatgggacctgcatcgagggccacattgtgaagtgctactggggcaaagaaacagct
gatatgagatccatgcaacagatgcaaatgccccagcagaataaacccacctatgcggcc
cagccttacggacagtggggtcagtcatacggcaatggtcagcagatgggtcagtatatg
cccaacggctggcagatgcccacatacaacgtctatgggcaggcctggaatcagcaggga
tataaataa
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