Cyprinus carpio (common carp): 109090336
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Entry
109090336 CDS
T05134
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109090336
03036 Chromosome and associated proteins [BR:
ccar03036
]
109090336
Spliceosome [BR:
ccar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109090336
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
109090336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
LSM_int_assoc
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
FAT
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
109090336
NCBI-ProteinID:
XP_018959690
Ensembl:
ENSCCRG00000027801
UniProt:
A0A9Q9ZI81
LinkDB
All DBs
Position
A5:12543854..12568521
Genome browser
AA seq
912 aa
AA seq
DB search
MAATGNEEQTLLPDIEEEAEGMEREMESEEEEEEGMGVEHSEEEDEEDTSEDELENEAEI
QRLEEQLSINAFDYNCHVDLIKLLRQEGKLHRLRKARQKMSELFPLTEEIWLDWLKDEIR
LTEDESDREKVYELFERAVKDYVCPEIWLEYVQYSIGGMGAQGGIERVRSIFERALTAVG
LHMTKGASIWEAYREFEIVILSTVQPPPGSAPSQEQQELLNAQLERIHTLFRRQLAVPLM
DMEGTYAEYSDWADDGVPEMVTRQYRRALQQLEKGKPFEEALLVSEPPKLAEYQAYIDFE
MKEGDPARVQIIFERALAENCLVPDLWIKYTTYLDRQLKIKDLVLSAHERAVRNCPWTMG
LWKSYLLALERHGADHQTVTDVFEKALNAGFIQATDYVEIWQSFLDYLRRRVDFSKEWSR
ELDELRAAFARSLDYLKQDVEERFSESGDLSCTIMQIWARIEALHCKNMQKARELWDSIM
TKGNAKHANMWLEYYNLERSYGDASHCRKALHRAVQCTSDYPEHVCDVLLNFERVEGSLE
DWDAAVQKTETKINRVKEQRARVAEKEALQARQEEEKAEHRRKAKADKKGQKKSQKVNRT
GDKRKADDEYEQEWGEDAELPSKRLRGEDDFGSTATEELMETESGLFGRRAPPRKTEPPG
FRKNQRGSSEAPQQPQDVSKEQRIDENCVFVSNLAFNLDDPEGKLRALFQGCGTVQQVRP
VFSMNGVFRGYCYVQFEDRLAVPEALKLDRKEVDGRPMYVSPCVDKNKNPDFKVFKYKTA
MEKHKIFISGLPYTCTKETLEDLCKQHGTVKAIRLVTNRSGKPKGLAYVEYENEAQASQA
VLKMDGSMLENFTLSVAISNPPSRMMEDKGVPSRLLGAAMPRQPQGARGEGTHPDLSAAT
LSVSSDVLQMPS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgggtaacgaagaacagacgttgttgccagatattgaagaggaggctgag
ggcatggagcgagagatggagtcagaggaggaggaagaagaagggatgggagtcgagcat
tccgaggaggaagacgaagaggatacgtctgaggacgaactggagaatgaagcggagatc
cagaggctggaggaacagttgtcaatcaacgcgtttgactacaactgccatgttgaccta
atcaaactcctgcggcaagaagggaagcttcacagactgcgcaaggccaggcagaagatg
agcgaactctttcctctcactgaagagatttggctggactggctcaaggatgaaattcgc
ctgacagaagacgaatcagaccgtgagaaagtctatgagctgttcgagagggctgtcaag
gattatgtctgtccagagatctggctggaatacgtacagtactccatcgggggaatggga
gcccagggaggcattgagcgggtgcgctccatctttgagagggcgctgactgcagtgggt
ttacacatgactaaaggagcttcaatctgggaagcctacagggagtttgagattgttatt
ctgtccacagtacagcctcctcctggcagcgctccatcacaggagcagcaagagttgttg
aacgcccagctcgaacgcatacacacgctcttcaggcggcagctagcagtacctctgatg
gatatggagggaacatatgcggaatactctgattgggctgacgatggcgtaccggagatg
gtcacacgccagtacagacgtgcccttcaacagttggagaaaggcaaacctttcgaggag
gctttgctggtctctgaacctccaaagctggcagagtatcaagcctacatagattttgaa
atgaaggaaggagatccggctcgtgttcagatcatatttgagcgggcgctggcggagaat
tgccttgtgccggacctgtggatcaaatacaccacatatctggatcgtcagttgaaaatt
aaagacctagtgttatctgctcatgagcgagccgtcaggaactgtccctggaccatgggc
ctgtggaagagctatcttttggctctagagaggcatggggctgatcatcagactgtgaca
gatgtgtttgaaaaggccctgaacgcagggttcattcaggcgactgattatgtagaaatc
tggcaatcttttctggactacctgaggagacgtgttgatttcagcaaagaatggagcagg
gagttggatgagctgcgggcagcttttgcacgctcccttgactacctgaaacaggatgta
gaagagaggttcagtgaaagtggagatctgtcctgcacaataatgcagatctgggcaagg
atagaggccttacactgtaagaacatgcagaaggcccgtgaactgtgggacagcatcatg
acaaaaggaaatgcaaaacatgccaacatgtggctggaatattacaacctggaaaggtca
tatggagatgcttctcactgcaggaaggctctccacagagctgtacagtgtacatcagac
tatcctgagcatgtctgtgatgtcctgctcaactttgaaagagtggagggctctctggaa
gactgggatgctgcagtccaaaaaacagagactaaaatcaacagagtcaaagagcagaga
gcaagagtggctgaaaaagaggctctccaagccaggcaagaggaggagaaagccgagcac
cggaggaaagccaaggcagataaaaaaggccaaaaaaagagccagaaagtaaacagaacg
ggggataaacggaaagctgatgacgagtacgagcaggaatggggagaggatgcagagctg
ccgtccaagaggctcagaggggaggacgactttggtagcacagccacagaggagctcatg
gagacagaaagtgggcttttcggccgacgagctccaccacgtaaaactgagccacctggt
ttccgtaagaaccagcggggatcatctgaagcaccgcaacaaccccaggacgtatcgaag
gagcagcgcatagatgaaaattgtgtatttgtcagtaacttggcttttaatctggatgac
ccagagggcaagctgcgagcattgtttcagggttgtgggactgtacagcaggtgcggcca
gtgttttcgatgaacggtgtgtttagaggctattgctatgtgcagtttgaggaccgactg
gctgtacctgaggcactgaaactggacaggaaggaggtggatgggcggcccatgtatgtg
tctccttgtgtggacaagaataagaatcctgacttcaaggtattcaagtacaaaacagca
atggagaagcacaagatctttatctcgggtctgccgtacacatgcactaaagagacactg
gaggatctctgtaaacagcacggcacagtgaaagccatccggctggtcaccaaccgttct
ggcaaacccaagggtttggcgtatgtagaatatgagaatgaagcacaggcctcacaggct
gtgctgaagatggacggcagcatgttggagaacttcacactctctgttgccattagcaac
cccccgagcagaatgatggaagataaaggagtgcctagtcgactcctaggggcagcgatg
ccaaggcaacctcagggcgcaagaggggaagggacgcacccagatctctctgctgccacg
ctctctgtatcgtcagatgtactccagatgccaagctga
DBGET
integrated database retrieval system
