Cyprinus carpio (common carp): 109090392
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Entry
109090392 CDS
T05134
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109090392
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109090392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
UBA_N4BP1_C
zf-CCCH_4
TNFR_ELAPOR1_6th
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
109090392
NCBI-ProteinID:
XP_042579650
Ensembl:
ENSCCRG00000047506
UniProt:
A0A9Q9WA61
LinkDB
All DBs
Position
B5:4170074..4186649
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AA seq
1008 aa
AA seq
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MVLELAAPASAGPALQRCIPHIQRVFRVRVSCSTAESSCESPNAGSSIIVNIEDGREEDC
TKAQEYIISLISPVHKHRERLTLWLQRRLHALRAAIEYESCAVVQVRDHALELQGGHAQV
TAACAMLQRLKMEHRGCREPQALPAAAGHDSPEEEEEEDDEEAGEDGSSSESDGEGRSRS
RSSGGVVSTSGSGEGVTGKRQDPLIATKPHRQLCRSSCLDRPSFSQSSILQELRADDTQR
AQMPLRQTSDRDYQTKMDFALKLGYSGEQVESVLGKLGSSALINDVLAELVRLGNKGDQE
SQTAAGTGGLTPRAVGAKEAVSQEASLEEDTSDTYDNLRPIVIDGSNVAMSHGNKEVFSC
LGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLEKEKILVFTPSRRVQ
GRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPP
DDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCTYGHKCKYYHPERANQPQRA
VADELRAFAKLSAVKTMSEGALAKCGTSGSANKGDGSSEAKRVAPKRQSDPSIRSVACEQ
EERLCPARKAEANSVPSLVSALSVPTMPLTKSHAAGALNTRSASSPVPGSLHFTHSSLEH
AGSVQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFSTISLQDSFCSLEQPE
PVGVGGGYPGRASMCPEPGRSHSSDSYSSYSGEMYLNSLEGSLDESMKGPPSQTQTQPSA
QTRLQAFAHGFHHEALTRVQSYGMDEPKLGPRKQSSAHLAPHSQHPVVGNRSSCPGDYPP
VSQNMLPSTSPSQQGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPCGNE
PYSYGSYGLTGGLMPCCERVMVRSMPEKMEQIWRSPWDSVPPPPLSARGPAEEPQERHPI
PEHHYQTYRNLCNIFPAYVVHLVMEENPHMTDPQQLAAVIVTKLRTCH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgccgcgcccgccagtgcaggccctgcgctccagcgctgcatcccg
cacatccagcgggttttccgggtcagagtgagctgcagcaccgcagagtccagctgcgag
agccccaacgccggctccagtatcatcgtaaacatcgaggacggcagggaagaagattgc
actaaagctcaagagtacattatatcactgatcagtccagtgcataagcaccgtgagcgt
ttgaccctttggctgcagcggcgactgcatgccctacgtgcagctattgagtacgagagc
tgtgccgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcgcaggta
acagctgcatgcgctatgctgcagcgcctgaagatggagcaccgtggctgccgcgaaccc
caggccttgcccgctgctgccggccatgactctccagaagaagaggaggaggaggatgat
gaagaagccggggaagatgggagcagttctgagagtgacggagaggggcggtcacggagc
aggagttctggaggtgttgtcagcacgtcggggtcaggagaaggagtgaccggaaagagg
caggacccactcatagcaaccaaacctcaccggcagctgtgccgctcatcctgtttggac
cgtcccagcttcagccagagcagcatcttacaggagttgcgcgcagatgacacccagaga
gcccaaatgcccttgcgtcaaaccagcgatcgagattaccagaccaaaatggactttgct
ctgaagctgggctactccggagagcaggtggagtctgtgctgggtaaactggggtctagc
gcactaatcaatgatgtattggccgagctggtacggttagggaataaaggagatcaagag
agccagacagcagcgggcactggcggtttaacaccacgggcggtgggagccaaagaagcc
gtcagccaggaagcatcgctggaggaagacacatcagacacgtatgacaacctccgacca
attgtgatcgatggatccaatgttgccatgagccatggaaacaaagaggtgttctcatgc
ctgggcattcaactggctgttgattggttcctggagaagggccacaaagacatcacagtt
ttcgttccagcatggaggaaagaacagtcaagacctgatgcgccaatcaaagatcaggag
atcctacggaaattagagaaggaaaagatcctcgtcttcacgccgtctcgcagagtccaa
ggccgacgagtggtttgctacgacgaccgttttatcgtcaagctggcctgcgattcagac
gggatcatcgtgtccaacgacaactaccgagacttgcagaatgagaaaccagagtggaag
aaatttattgaggaacgactcctcatgtacagcttcgtcaacgacaagttcatgcctcct
gatgatcctttaggcagacatggacccagtctggaaaattttctccgcaaacgaccagtg
gttccagagcacaagaagcaaccatgtccttatggtcagtacagcaaaagtaagaagtgc
acgtacggccataaatgcaagtactaccacccagaaagagccaaccaacctcagcgggct
gttgcagacgagctcagagcctttgccaaactctccgctgtaaagacaatgagtgagggg
gcacttgccaaatgtgggacctctggttctgctaacaagggagacggtagctctgaggca
aagcgagtggcacccaagcgccagtctgaccctagtatccggtcggttgcatgcgagcaa
gaagagagactctgtccagcacggaaggctgaggccaattcggtaccgtcgttagtttcg
gcccttagcgttccaactatgccgctgacgaaaagtcacgcggcaggcgctcttaacaca
cgctctgcgagcagccctgttccagggtctctgcactttacccacagctcgctcgagcat
gcgggcagtgtccaatatcctcccatccttgtaaccaatagtcagggcgcctccgtggct
tatggtgagccgttccccaagtacgactctgtggtaagcgatcacggctactattcaatg
ctcagtgacttctccaccatcagcctccaagacagtttctgcagtcttgaacagccagag
cctgtaggggtgggtggaggatatcctggcagagccagcatgtgcccagaacccggccga
agtcattcgtcagactcctattcatcctacagtggagagatgtacctcaactcattggag
ggaagcctggatgaaagcatgaaagggccaccgtcgcagacccagactcaaccttcggcg
caaacacgccttcaagcctttgctcacggtttccaccatgaggccttgacacgtgtgcag
agctacggaatggatgaacccaaactgggacctcgaaaacagtcctccgcccaccttgca
ccacactcccaacacccggttgtcggcaaccgatccagctgcccaggagactaccctcct
gtgtcccagaacatgttgccttccaccagcccttcccagcagggtcggtccttaggcatg
actcgaatggacagcatctctgactcacggctctacgagagcaatccgttgcgccagcgg
agacctcctctttgtcgagagcagcatgccagctgggaccctttgccgtgtggtaatgag
ccctacagttacggaagctatggattaacaggaggcctcatgccttgctgtgaaagggtg
atggtccgcagcatgcccgagaagatggagcagatctggaggtccccgtgggatagcgtg
ccgcctccaccgctcagtgctcgtgggccagcggaggaaccccaagagcggcaccctatt
ccagaacaccactatcaaacataccgaaacctctgtaacatcttcccggcgtatgtggtc
catttggtcatggaggagaaccctcacatgactgatccccagcagctggctgccgtcatc
gtcactaaactgcgaacttgccactaa
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