Cyprinus carpio (common carp): 109090549
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Entry
109090549 CDS
T05134
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04382
Cornified envelope formation
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04514
Cell adhesion molecule (CAM) interaction
ccar04518
Integrin signaling
ccar04810
Regulation of actin cytoskeleton
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109090549
04514 Cell adhesion molecule (CAM) interaction
109090549
04518 Integrin signaling
109090549
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109090549
09142 Cell motility
04820 Cytoskeleton in muscle cells
109090549
04810 Regulation of actin cytoskeleton
109090549
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109090549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109090549
04515 Cell adhesion molecules [BR:
ccar04515
]
109090549
04090 CD molecules [BR:
ccar04090
]
109090549
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109090549
Exosomal proteins of breast milk
109090549
Cell adhesion molecules [BR:
ccar04515
]
Integrins
Integrin alpha subunits
109090549
CD molecules [BR:
ccar04090
]
Proteins
109090549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
VERL_C
Motif
Other DBs
NCBI-GeneID:
109090549
NCBI-ProteinID:
XP_042586564
Ensembl:
ENSCCRG00000011732
UniProt:
A0A9Q9WNB0
LinkDB
All DBs
Position
B9:3092316..3116497
Genome browser
AA seq
1090 aa
AA seq
DB search
MGLFDEGFSLNLCIFSLLLWTSTSAFNLDAQNVLRKNGQPGSLFGFSLALHRQLQPYDKR
ILLIGAPKARALSNQGANITGGLYSCDITTHPNDCTRVDFDNDVDARVENKENQWMGVTV
QSQGPGGKIVTCAHRYQRLLFPNTPQEARDITGRCYMLSQDLSIDSQSDEDGGNWKFCDG
RTRGHERFGACQQGLAATFTKDYHYVIFGAPGAYNWKGIVRVEQKNNTLLEMGLFDDGPY
EVGDENRLDPNLVPVPANSYLGFSLDSGHSITEKGRLVIVSGAPRANHSGAVVFLRTGGE
VSTTLTPEHVLEGPGLASSFGYDVAVVDLNGDGWQDVVVGAPQFFQRDEEVGGAVFVYIN
KAGRWKDVAPTRLNGTKHSMFGLAVENIGDINLDSFEDIAVGAPYADSGFGSVYIYHGSA
DGINTTPAQILEGKQHNIKMFGYSLAGNMDLDQNSYPDLAVGSLSDTVFIYRSKTVISIK
KDIKVTPKEIDLVKKTCGNSVCLTVEACFSYKAKPSTYNPKLTVSCTLEAEWYRRKLGLP
SRVVFLEKSAMDQDFQSTGSLELRGQNKKACYKTKLRLQEGIRDKLRAIPIEVSVAIQSA
KRGKRQSSLPQLTPILDSTVPNKTITEVNFLKEGCGTDNICQSNLHLQYRFCYRESKQDV
FPPLPLEKGVPVISLSDQKDIALEVTVRNRNGDDAHEAKLVGHFDESLSYSGFRSTDKHV
ICAANQNGSQADCELGNPFKRDSEVTFYIILSTGKISLDTKEVEIDLQLETTSLQEGLGK
VKAKAKVVIELLLSVQGVAKPSQVYFGGEVRGMSAMKTEEEVGSLVEYEFRVINLGKPLK
SFGTASLNIQWPKESSVGKWLLYLMKINTRDLQLVTCSPEREINPLRLSEDSTSTRRKRE
LEERKPSEGSKTSLIPDKRKHKILSCSGDARCVEIKCPLQGLDSTAVIILKSRLWNSTFL
EDYVSYSYLDIIVKASISLDASAKNIVLKKPETQVRLTVFPETAVTPFGGVPWWIILVAV
LAGILMLALLVLLLWKCGFFKRSKYEDSVPKYHAVRIRKETRLLKDGEDMLDPLEKKQWM
TTWNENESYS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggggctctttgacgaggggttctctctgaacctgtgcattttttcattgctcttatgg
acttctacaagtgcatttaacctggacgcgcaaaacgtcctgaggaagaacggtcaaccg
ggcagcctcttcggattctctctcgccttgcaccggcagctccagccgtatgataaaaga
atattgttgatcggtgctcccaaagccagggctttatccaatcagggagcaaacatcacg
ggtgggctgtacagctgtgacatcaccacccatcccaatgactgcactcgagtggacttt
gacaatgatgttgatgctcgtgtggagaataaggagaaccagtggatgggtgtaactgtt
cagagtcaaggacctggaggcaagattgtgacatgtgcccatcgctaccagcgcctgttg
ttccccaacaccccccaagaggcgcgtgacatcacgggacgctgctacatgctcagccag
gacctgagcatcgacagccagtcagacgaggatggagggaactggaaattctgcgacggt
cgcaccaggggtcatgagagattcggggcctgtcagcagggcttggctgccaccttcact
aaagactaccattatgtcatctttggagcaccaggggcatacaactggaaaggtatagtg
cgtgtggagcagaagaacaacactcttctggaaatgggcttgtttgatgacggcccttat
gaggtcggggatgaaaaccgcctggatccaaatctagtgcctgtaccagccaacagttac
ttgggattctctctagattccggccacagcatcacagagaaaggcagactcgtcatagtg
tcaggagcgccgagagccaatcacagcggtgcagtggtgtttctgcggacggggggagaa
gtgtccaccacgctcacacctgaacacgttctggaaggaccgggactcgcatcctccttt
ggatatgatgtcgctgtggtggacctgaatggagatggctggcaggacgttgtggttggt
gcccctcagttcttccagagagatgaggaagtgggtggagccgtgtttgtttacatcaat
aaggctggaaggtggaaggacgtcgctcccactcgcctgaatggaacgaaacactccatg
tttggactggctgtggagaacattggagacatcaatctggattcttttgaagatattgca
gtaggtgctccatacgcagactcagggtttggtagcgtgtacatctaccacggatctgct
gacggcatcaataccacaccagctcagattctggagggtaaacagcacaacattaagatg
tttggctattctctggctggaaacatggacctggatcagaactcgtaccctgatctcgcc
gtgggctcgctctctgacacagttttcatatacaggtccaaaactgttatcagcatcaag
aaagacatcaaggtgacaccaaaggagattgacctggtgaagaaaacatgtggcaacagc
gtctgcttgactgtggaagcgtgtttctcatataaagcaaagccctccacctacaaccct
aaactcaccgtctcctgtacacttgaggcagagtggtaccgcaggaagctgggtcttcca
tccagggttgtgtttctggagaagagcgcgatggatcaggacttccagtcgaccggctct
ctggagctacgaggacagaacaagaaagcctgttacaagaccaaactcagattacaagaa
ggcatcagggataagctcagagcgattcctatcgaggtgtcggtggccattcagagcgct
aagagaggcaaacggcagagctctctgccgcaactaactccaatactggactccactgtg
cccaacaagaccatcactgaggtgaacttcctgaaggaggggtgtggcacagacaacatc
tgtcagagtaacctacacctgcagtacaggttctgctacagagagtccaaacaagatgtg
tttcctcctctaccgctggagaaaggtgtgccggtgatttctctgagtgatcagaaggac
atcgctctggaggtcacagtcaggaacaggaatggagatgatgctcatgaagccaaattg
gttgggcattttgatgaatccctctcatattcaggattcagatctactgataaacatgtg
atctgcgctgccaatcagaatggctcccaggcagactgcgagctgggaaacccttttaaa
cgggactcagaggtaacattctacatcattttgagcactggcaagatatcactcgacacc
aaagaggttgagatcgaccttcagctggaaacaacaagtttacaggaaggcctgggcaaa
gtgaaggccaaagccaaagtggtgattgaactacttctttctgtgcaaggggttgccaag
ccgtctcaggtctattttggaggtgaagtcagaggcatgagcgctatgaagacagaggaa
gaagtcggcagcttggtcgaatatgaattcagagtgattaatttgggaaagcctctgaag
tctttcggaactgcatctctgaacatccagtggcctaaagaaagctctgtggggaaatgg
ctgctgtatctgatgaagatcaacaccagggacctgcagttagtcacctgttctcctgag
agagagataaaccctctcagactgagcgaggactcaacatcaaccaggagaaagcgtgag
ctggaggagcggaaaccatctgaaggcagtaaaacatccctcatccctgacaaacgcaag
cacaagattctgtcttgcagtggagatgctagatgtgtggagatcaaatgccccctacag
ggcttggacagcactgcggtcatcattctgaaatcccgcctgtggaattccactttcctt
gaagattatgtgtcctacagttacctcgatataatagtgaaagcctccataagtctggat
gcttctgccaagaacattgtccttaaaaaaccagagacccaggtgaggctgaccgtgttc
ccggagacggccgtgactccgttcggaggcgttccctggtggatcattctggtggctgtt
ttagctggaattctaatgctggctcttctagttctgttactctggaagtgtggatttttc
aaacgctctaaatatgaggacagcgttccgaaatatcacgcggtgaggattcgtaaggag
acacgtctcttgaaagatggagaggacatgttagatcccttggagaagaagcaatggatg
accacatggaatgagaacgagagctactcatga
DBGET
integrated database retrieval system