KEGG   Cyprinus carpio (common carp): 109090549
Entry
109090549         CDS       T05134                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04382  Cornified envelope formation
ccar04510  Focal adhesion
ccar04512  ECM-receptor interaction
ccar04514  Cell adhesion molecule (CAM) interaction
ccar04518  Integrin signaling
ccar04810  Regulation of actin cytoskeleton
ccar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109090549
   04514 Cell adhesion molecule (CAM) interaction
    109090549
   04518 Integrin signaling
    109090549
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109090549
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109090549
   04810 Regulation of actin cytoskeleton
    109090549
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109090549
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109090549
   04515 Cell adhesion molecules [BR:ccar04515]
    109090549
   04090 CD molecules [BR:ccar04090]
    109090549
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109090549
  Exosomal proteins of breast milk
   109090549
Cell adhesion molecules [BR:ccar04515]
 Integrins
  Integrin alpha subunits
   109090549
CD molecules [BR:ccar04090]
 Proteins
  109090549
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha VERL_C
Other DBs
NCBI-GeneID: 109090549
NCBI-ProteinID: XP_042586564
Ensembl: ENSCCRG00000011732
UniProt: A0A9Q9WNB0
LinkDB
Position
B9:3092316..3116497
AA seq 1090 aa
MGLFDEGFSLNLCIFSLLLWTSTSAFNLDAQNVLRKNGQPGSLFGFSLALHRQLQPYDKR
ILLIGAPKARALSNQGANITGGLYSCDITTHPNDCTRVDFDNDVDARVENKENQWMGVTV
QSQGPGGKIVTCAHRYQRLLFPNTPQEARDITGRCYMLSQDLSIDSQSDEDGGNWKFCDG
RTRGHERFGACQQGLAATFTKDYHYVIFGAPGAYNWKGIVRVEQKNNTLLEMGLFDDGPY
EVGDENRLDPNLVPVPANSYLGFSLDSGHSITEKGRLVIVSGAPRANHSGAVVFLRTGGE
VSTTLTPEHVLEGPGLASSFGYDVAVVDLNGDGWQDVVVGAPQFFQRDEEVGGAVFVYIN
KAGRWKDVAPTRLNGTKHSMFGLAVENIGDINLDSFEDIAVGAPYADSGFGSVYIYHGSA
DGINTTPAQILEGKQHNIKMFGYSLAGNMDLDQNSYPDLAVGSLSDTVFIYRSKTVISIK
KDIKVTPKEIDLVKKTCGNSVCLTVEACFSYKAKPSTYNPKLTVSCTLEAEWYRRKLGLP
SRVVFLEKSAMDQDFQSTGSLELRGQNKKACYKTKLRLQEGIRDKLRAIPIEVSVAIQSA
KRGKRQSSLPQLTPILDSTVPNKTITEVNFLKEGCGTDNICQSNLHLQYRFCYRESKQDV
FPPLPLEKGVPVISLSDQKDIALEVTVRNRNGDDAHEAKLVGHFDESLSYSGFRSTDKHV
ICAANQNGSQADCELGNPFKRDSEVTFYIILSTGKISLDTKEVEIDLQLETTSLQEGLGK
VKAKAKVVIELLLSVQGVAKPSQVYFGGEVRGMSAMKTEEEVGSLVEYEFRVINLGKPLK
SFGTASLNIQWPKESSVGKWLLYLMKINTRDLQLVTCSPEREINPLRLSEDSTSTRRKRE
LEERKPSEGSKTSLIPDKRKHKILSCSGDARCVEIKCPLQGLDSTAVIILKSRLWNSTFL
EDYVSYSYLDIIVKASISLDASAKNIVLKKPETQVRLTVFPETAVTPFGGVPWWIILVAV
LAGILMLALLVLLLWKCGFFKRSKYEDSVPKYHAVRIRKETRLLKDGEDMLDPLEKKQWM
TTWNENESYS
NT seq 3273 nt   +upstreamnt  +downstreamnt
atggggctctttgacgaggggttctctctgaacctgtgcattttttcattgctcttatgg
acttctacaagtgcatttaacctggacgcgcaaaacgtcctgaggaagaacggtcaaccg
ggcagcctcttcggattctctctcgccttgcaccggcagctccagccgtatgataaaaga
atattgttgatcggtgctcccaaagccagggctttatccaatcagggagcaaacatcacg
ggtgggctgtacagctgtgacatcaccacccatcccaatgactgcactcgagtggacttt
gacaatgatgttgatgctcgtgtggagaataaggagaaccagtggatgggtgtaactgtt
cagagtcaaggacctggaggcaagattgtgacatgtgcccatcgctaccagcgcctgttg
ttccccaacaccccccaagaggcgcgtgacatcacgggacgctgctacatgctcagccag
gacctgagcatcgacagccagtcagacgaggatggagggaactggaaattctgcgacggt
cgcaccaggggtcatgagagattcggggcctgtcagcagggcttggctgccaccttcact
aaagactaccattatgtcatctttggagcaccaggggcatacaactggaaaggtatagtg
cgtgtggagcagaagaacaacactcttctggaaatgggcttgtttgatgacggcccttat
gaggtcggggatgaaaaccgcctggatccaaatctagtgcctgtaccagccaacagttac
ttgggattctctctagattccggccacagcatcacagagaaaggcagactcgtcatagtg
tcaggagcgccgagagccaatcacagcggtgcagtggtgtttctgcggacggggggagaa
gtgtccaccacgctcacacctgaacacgttctggaaggaccgggactcgcatcctccttt
ggatatgatgtcgctgtggtggacctgaatggagatggctggcaggacgttgtggttggt
gcccctcagttcttccagagagatgaggaagtgggtggagccgtgtttgtttacatcaat
aaggctggaaggtggaaggacgtcgctcccactcgcctgaatggaacgaaacactccatg
tttggactggctgtggagaacattggagacatcaatctggattcttttgaagatattgca
gtaggtgctccatacgcagactcagggtttggtagcgtgtacatctaccacggatctgct
gacggcatcaataccacaccagctcagattctggagggtaaacagcacaacattaagatg
tttggctattctctggctggaaacatggacctggatcagaactcgtaccctgatctcgcc
gtgggctcgctctctgacacagttttcatatacaggtccaaaactgttatcagcatcaag
aaagacatcaaggtgacaccaaaggagattgacctggtgaagaaaacatgtggcaacagc
gtctgcttgactgtggaagcgtgtttctcatataaagcaaagccctccacctacaaccct
aaactcaccgtctcctgtacacttgaggcagagtggtaccgcaggaagctgggtcttcca
tccagggttgtgtttctggagaagagcgcgatggatcaggacttccagtcgaccggctct
ctggagctacgaggacagaacaagaaagcctgttacaagaccaaactcagattacaagaa
ggcatcagggataagctcagagcgattcctatcgaggtgtcggtggccattcagagcgct
aagagaggcaaacggcagagctctctgccgcaactaactccaatactggactccactgtg
cccaacaagaccatcactgaggtgaacttcctgaaggaggggtgtggcacagacaacatc
tgtcagagtaacctacacctgcagtacaggttctgctacagagagtccaaacaagatgtg
tttcctcctctaccgctggagaaaggtgtgccggtgatttctctgagtgatcagaaggac
atcgctctggaggtcacagtcaggaacaggaatggagatgatgctcatgaagccaaattg
gttgggcattttgatgaatccctctcatattcaggattcagatctactgataaacatgtg
atctgcgctgccaatcagaatggctcccaggcagactgcgagctgggaaacccttttaaa
cgggactcagaggtaacattctacatcattttgagcactggcaagatatcactcgacacc
aaagaggttgagatcgaccttcagctggaaacaacaagtttacaggaaggcctgggcaaa
gtgaaggccaaagccaaagtggtgattgaactacttctttctgtgcaaggggttgccaag
ccgtctcaggtctattttggaggtgaagtcagaggcatgagcgctatgaagacagaggaa
gaagtcggcagcttggtcgaatatgaattcagagtgattaatttgggaaagcctctgaag
tctttcggaactgcatctctgaacatccagtggcctaaagaaagctctgtggggaaatgg
ctgctgtatctgatgaagatcaacaccagggacctgcagttagtcacctgttctcctgag
agagagataaaccctctcagactgagcgaggactcaacatcaaccaggagaaagcgtgag
ctggaggagcggaaaccatctgaaggcagtaaaacatccctcatccctgacaaacgcaag
cacaagattctgtcttgcagtggagatgctagatgtgtggagatcaaatgccccctacag
ggcttggacagcactgcggtcatcattctgaaatcccgcctgtggaattccactttcctt
gaagattatgtgtcctacagttacctcgatataatagtgaaagcctccataagtctggat
gcttctgccaagaacattgtccttaaaaaaccagagacccaggtgaggctgaccgtgttc
ccggagacggccgtgactccgttcggaggcgttccctggtggatcattctggtggctgtt
ttagctggaattctaatgctggctcttctagttctgttactctggaagtgtggatttttc
aaacgctctaaatatgaggacagcgttccgaaatatcacgcggtgaggattcgtaaggag
acacgtctcttgaaagatggagaggacatgttagatcccttggagaagaagcaatggatg
accacatggaatgagaacgagagctactcatga

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