Cyprinus carpio (common carp): 109091182
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Entry
109091182 CDS
T05134
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109091182
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109091182
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109091182
Nuclear receptors [BR:
ccar03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109091182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CTNNB1_binding
Motif
Other DBs
NCBI-GeneID:
109091182
NCBI-ProteinID:
XP_042596468
Ensembl:
ENSCCRG00000024132
UniProt:
A0A9R0AFJ6
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Position
B16:complement(9037275..9070826)
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AA seq
508 aa
AA seq
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MENDEPASPDPSHDSTQSKRGSPVHKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDS
LFAEVERHRQQQRLQANSVQEPQPLPAYRSSKEPREQSSHLIPPLPPAYPYSVEPELQGC
PPEMHPYLECRIGEAQAQSLAYRGSHRRGESNSLSAGRGFDSTRSTPEAILNMSGSEMGI
RPFDPESSFFSYPTSLHIEELSASIVRSHRETTQYRPEELQALRWKVFSREEIHAYQSKS
VDEMWQHCAVRLTDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNTE
NNTVFFDGKFAGTELFKSLACGDLIAAVFDFAHNLCALRLTEQQMAVFTALVLLNAVDRP
CLEDRDRVQRARRDLELALNHILHRDNQESLLHKLYQRVPVLKSLCALHIEKLRWFRQLY
PLTVHSLFPPLYKELFGSDTDIQTLTTH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatgagcctgcatcaccggacccgagccatgacagcactcagagtaaaaga
ggaagtccagtgcacaagaaatcccatctaactcagattgaggtgatcccatgtaagatc
tgtggagataagtcttcaggggttcattatggagttatcacttgtgagggctgcaagggc
ttcttccgcagaagtcagtcctccagtgtgcagtactcctgctccagacagagcaactgt
cctattgaccgtgccagccgtaaccgctgccagagctgccgtctcaaaaaatgtgtcgct
cagggaatgagccgtgatgcggtgaagtttggccggatgtctaagcgccagagagactct
ctgtttgcagaagttgagagacaccggcagcagcagcgtcttcaggccaactcagtccaa
gagccccagcctcttccagcctaccgatccagcaaagagcccagagaacagtcatcacat
ctcatcccacctctacctccagcttacccttactctgtagagcctgaactgcaaggctgc
cctccagagatgcatccatacctggagtgtcgcataggcgaggcccaggctcagagtctg
gcctacaggggctcccacaggagaggtgagagcaacagcttgtcagctgggagaggattt
gactccacaaggtctacaccagaggctattctgaacatgagcggcagtgaaatgggtatt
cgtccttttgaccctgagagctcgttcttttcttacccaacatctctgcacatagaggag
ctctctgcaagtatcgtgcgttcccacagagagacgactcagtatcgaccggaggagctg
caggctctcagatggaaggtttttagcagggaggagatccacgcttaccagagcaaatcg
gtggatgagatgtggcagcactgtgcagtgcggttgacagatgctgttcagtacgtggtg
gagtttgctaaacgtatcccaggattccgccagctctgtcagaatgatcaaattgctctc
ctcaagagtgggtccatggaagtggttctggtccggatgagtaggatgtttaacacagaa
aacaacacagtattctttgatggcaaatttgcaggaacagaacttttcaaatccctcgca
tgtggtgatctgatagctgctgtttttgactttgctcacaatctgtgtgcgctgagactg
actgaacagcagatggcagttttcactgcactggtcctcctcaatgcagtagatcgaccg
tgtctggaggacagagatcgagtgcagagagccaggagagatttggagctcgcccttaat
cacattctgcacagagacaatcaggagagtctactgcataagctgtatcaaagagtccca
gtgctgaagtctctgtgtgcgctgcatattgagaaactgcgatggttccggcagctctac
cctctcacggtgcattctctcttccctccgctatacaaagagctgttcggctctgacacg
gatatacagacgctgaccactcattga
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