Cyprinus carpio (common carp): 109091342
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Entry
109091342 CDS
T05134
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109091342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109091342
03036 Chromosome and associated proteins [BR:
ccar03036
]
109091342
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109091342
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
109091342
COMPASS/SET1 complex (yeast)
109091342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_HPS5
PQQ_2
VPS8_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
109091342
NCBI-ProteinID:
XP_018960650
UniProt:
A0A9Q9Y6P9
LinkDB
All DBs
Position
B6:22130050..22136077
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG
VILEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacagacaatgtgctgcggagtttcagggttgcgaaggttttccgagagaat
tcggacaaaatcaactgctttgacttcagttcaaatggcgaaactgtgatatcgagtagc
gacgacgattcgattgtcttgtacgactgccaggagggaaaacctaaacggacgctttac
agtaagaagtatggtgtggatctcatcagatacacccatgccgcaaacactgtcgtctac
agctccaacaagattgatgatactattcgatacctgtccctacatgacaataagtacatt
cgatactttcctggacacaataagagggttgttgctctgtctatgtctcctgttgatgac
acattcatttctggctcacttgataaaactattcgtctgtgggaccttcgctcacctaac
tgtcagggcctcatgcacctgcaagggaagcctgtgtgttcatttgatccagaggggttg
atttttgctgcaggagtgaattctgagatggtcaaactttacgatctacgctcctttgat
aagggtccattcgccacgtttaaactacaatatgagcgaacatgtgagtggacgggtctc
aagttcagcaacgacggaaagctcattctggtctccaccaatggaggaacactcagagtg
ctggatgccttcaaaggagcagtgctccactcatttgggggctataacaacagtaaaggt
gtcattctggaggcttctttcacaccagactctcagttcgtcatgatcggatcagaagat
ggaaagatccatgtgtggaatgctgagagtggaatgaaagtagcacttcttgatgggaag
cacactggtccagtcacctgtctacagtttaaccccaaattcatgacctttgccagtgcc
tgttctaacatggcattctggttacccacgatagatgactga
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integrated database retrieval system