Cyprinus carpio (common carp): 109091418
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Entry
109091418 CDS
T05134
Name
(RefSeq) collagen alpha-1(VII) chain-like isoform X1
Organism
ccar
Cyprinus carpio (common carp)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Pur_ac_phosph_N
VWA_2
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
109091418
NCBI-ProteinID:
XP_018960719
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Position
11:complement(4168719..4189259)
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AA seq
989 aa
AA seq
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MGCLLQWTLLLAVLLCLPSRSTAQGQCNNVVAADIVFLVDGSSSIGRANFVLVKNFMAGI
VKPFARAVGPSGIRFGTIQYSDTARVEFTFTTYLNGTELITAIENINYKGGNTRTGAGLK
YIADNFFSPSSIRDVPKITILITDGKSQDSVQEPSQKLRSLGVKIFAVGIKSADPAELNL
IASPPQSEFTSQIGNFKALSSLLPLVSRRVCTTTGGSYSSDEAYSGPSDLQFSGETTNSL
RFRWTSAGGPVSGYVVQYRPLSGLGQPITAELRQETIPSNQQSYTARDLRSGTDYLITVI
AQYPNSLGESVSGKARTKPLQGVTALRLIQAGFFTLALGWDTPADQVQGYRITYGPIGQP
AAQLLERSVGAESTSLTLVGLKSDTEYVISLYPLFPRNSASPATLTARTLHLEGVQQLSV
ETISSNSIRVRWRGVAGARGYRVVWGPFTGSDVETVELGGDSESHILGNLRPDTEYIVTV
IALYNGEAEGPAATTRFKIERSEQQVLRATTTGPTSIRLNWNLIQAARGYRLEWKAGERG
RVQKQEFPKSTTNYELKSLQPNTEYIITLYTLYEGREEATFFSTKSTVEEQVGPVTNLRV
VDSLGNIIRLGWTGVSGATQYNIIILNTESNAEVNRRVPGNQTTFDLRDLEDGVRYAVSV
NALIGSKEGEPTTMYILAEPPLRVTNLRIVGSNSRRVRIAWTGVSEATGYRVTWRQSNTA
EQSRVLGGDVTTYTIDGLQPDDSVVVGVAPVIDGRTGEVVSVSTRTSGSNGIVTGLRVIE
VTPARIVISWTPVTRTTGYKIIWRRSDGVEDSEIVPADVASYVIDRLQEGAAYQIFISAL
FNSREGPSATVTARTDQATVGRVTNLQVVEAQGEVVRVSWVGVQNATSYRVLWKRTDGGE
ERSQLVGGNVTSVDLRQLDKGAQYEVKVLALVRNREGPPVSVRVTTGGPERDKSRGFASF
GLDPRGAPYNLESSEWSQLISNLLEVLTR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtttgctgcaatggactctgctgcttgctgtgttgttgtgtctcccatcacgg
tctacagctcaaggccagtgcaataatgttgtagcagcagacattgtgttcctagtagat
ggatcatccagtattggccgggccaactttgtgttggtcaagaatttcatggcagggatt
gtcaaaccctttgccagagcggtaggacccagtggcatccgttttggaaccatacagtac
agcgatactgccagggtggagtttacatttactacatacctgaatggaactgagctcata
actgccatagagaatatcaactataaaggtggaaacacgcggactggggctggcctcaaa
tacatcgcagacaacttcttcagcccttcctctatcagagatgtacccaagatcactatt
ctcattactgatggtaaatctcaggacagtgtgcaggagccttctcaaaaactacgtagc
cttggagtcaaaatatttgcagtgggtataaagagtgcagacccagctgagctgaatctc
attgcctctcctcctcaaagtgaattcacctctcagattgggaatttcaaagctctcagc
tctttgctgccactagtgtctcgacgtgtgtgtacaacaactggaggctcttactcaagt
gacgaagcctacagtggtccatcagacttgcaattttcaggcgagaccaccaattcattg
agatttcgatggacgtctgcaggagggcctgtaagtggctatgtggtccagtacaggccc
ctatctggcctgggtcagccaatcacagcagagcttcgacaggaaacaataccaagcaac
cagcagagctacactgcacgagatctgcgttcaggcacagactacctgatcactgttatt
gctcagtacccaaacagcttgggagagtcagtgtctggcaaggcccgaacaaagcctctc
caaggtgtgactgcactgcgactgatccaggctgggttttttactctggctttgggctgg
gacactccagctgaccaagtacaaggttacagaatcacctatggacctataggtcagcct
gctgcacagctgctggaacgatctgtgggggcagagtctacttctctgactttggtcggt
cttaagtcagatacagaatatgtgatcagcttgtacccactgtttccccgtaacagtgcc
tcaccagctaccctgactgcccgcacattgcatttggagggagtgcagcagctttccgtt
gagactatctcgagcaacagtattcgagtccgctggaggggagtggcgggggccagagga
tatagagtcgtttggggccctttcacaggaagcgatgtggagacggtagaactgggtggt
gatagtgaatctcacattctgggaaatctgagaccagacacggagtacatcgttacagtc
atcgctctgtacaatggagaagctgaaggaccagcagccactacacgttttaagatagag
cgttcagagcaacaggtcctgagagccacgactacgggacccaccagcatcagattaaac
tggaacctcatacaggccgccagaggctaccgactggaatggaaagccggagagagaggc
agagttcagaagcaagagttcccaaaaagcaccaccaactatgagctcaaaagtctgcag
ccgaacacagagtacatcataactctatacacactctacgaggggcgagaagaagctact
ttcttttcaaccaaatcaacagtagaggagcaagttggtcctgtcacgaacctgagggtg
gtggattcactcggaaacataattcgattaggatggacaggagtctctggggcaacacaa
tacaacatcatcattcttaatacagaatcaaatgcagaggtgaacagaagagttcctggg
aatcagaccacctttgacctacgggatcttgaagatggtgtacgctatgctgtcagtgta
aatgcactaattggatccaaagaaggggaaccaacaacaatgtacatcctagcagaacca
ccactgagggtgaccaacttgcggatagttgggagcaacagtcgacgagtcaggattgca
tggactggtgtttctgaggcaacaggctaccgggttacctggagacaaagcaacactgca
gagcaatctcgtgtcctaggtggtgatgtcactacctacactatagacgggctgcagcca
gatgattctgttgttgtgggtgttgccccagtgattgatgggcggactggagaagtggtc
tctgtgtctacaagaaccagtggttctaatggaattgttacagggctaagagtcattgaa
gtaacacctgcaaggatagtaatatcctggactccagtgactcgaacaacgggctataaa
ataatctggcggcgaagtgatggagtggaagactctgagattgtacccgctgatgtggct
tcctatgtcattgatagactccaagaaggtgcagcctaccaaatattcatctccgccctt
tttaactcacgggaaggaccttctgccactgtgactgcaaggacagatcaggccacggtg
ggtcgcgtcaccaatttacaggtggtggaggcccaaggggaggttgttcgagtcagctgg
gttggagttcaaaatgcgacttcatacagagtgctctggaaaaggactgacggtggagag
gagcggagtcagctggttggtggtaacgtgacctcagtggatctgaggcagttggataaa
ggggcacagtatgaagtgaaggttctggctctagttcggaacagagaaggcccacctgtc
tctgtcagagtcactacagggggtccagagagggacaagagtagagggtttgcgtctttt
ggactcgacccaaggggggctccgtataacctggagagcagtgagtggagccagctcata
tcgaatctactggaggtcctcacaaggtga
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