Cyprinus carpio (common carp): 109091424
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Entry
109091424 CDS
T05134
Symbol
si:dkey-28n18.9
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109091424 (si:dkey-28n18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109091424 (si:dkey-28n18.9)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109091424 (si:dkey-28n18.9)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Macropinocytosis
Sorting nexins
109091424 (si:dkey-28n18.9)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109091424 (si:dkey-28n18.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
DUF2229
Motif
Other DBs
NCBI-GeneID:
109091424
NCBI-ProteinID:
XP_042582197
Ensembl:
ENSCCRG00000034121
UniProt:
A0A9Q9WF06
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All DBs
Position
B6:complement(21589001..21593899)
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AA seq
374 aa
AA seq
DB search
MEVSSAEAALSVSASSIRITDVTQDGDVLTFAIASQKLNSSAGVCVFRIYEDFDWLQQSL
FSQENLPGLQGIIFPPLPSKALPSQSNTQTKALKQLGFLALGQDWQSYCKALEFYLQQVA
AHPTLCKCKALDSFLINSESPGKQRGRKGIFNRLSQAVEEMRKESHKDVDNFFQNERNKN
TNLAALSKVATEKLLDVVMTEQKLALACGHFATSLHLCVNQDDAAAVAFSKVCLKLSDVI
EAVNRNFEKVASNDLSTLGLGLDLESRYQEAEKVWECVLMIACKLIELETVKKGTEKAKA
SKREVMEAFQKAVEKEFNLISSVAKQEIERFHSSRVNVLKNFLIGWCELQLNTAKEFAEL
YSQHLEACRNMYSE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttcaagtgcagaagcagcactaagtgtaagtgcaagcagcatcagaatcact
gatgtgactcaggatggagatgttttgacatttgctatcgcgtcccagaaattgaacagt
agtgctggggtgtgtgtttttcgaatatatgaggactttgactggcttcaacagagtcta
ttctcacaagaaaatcttcccggacttcagggaattatatttccacctttgccctccaaa
gcacttccatcacaatcaaacacccaaaccaaagcactcaaacaacttgggttcctggct
ctaggacaggattggcagagttattgtaaggctctggagttttatctccagcaggtggca
gcacacccaactctctgcaagtgcaaagcactggacagctttcttattaactctgagtct
cctggaaaacagcgaggcaggaaaggaatctttaatcgcctcagccaggctgtggaggag
atgaggaaggaaagccataaggacgtggacaacttctttcagaatgagagaaacaaaaac
actaatcttgccgctttgtcaaaggttgccacagagaaattactcgatgttgtgatgaca
gagcaaaagcttgctttggcctgtggacatttcgccacatctcttcatctttgtgtgaat
caggatgatgcagctgctgtagctttctccaaggtttgtttgaagctatcagatgttatt
gaggcagtaaatcgaaactttgagaaagttgccagtaacgatctgtccactcttggtttg
ggtctggacctggagtctcgctaccaggaggcagagaaagtatgggaatgtgtcttaatg
atagcctgtaaactgatagaactggaaacagttaagaagggtacagaaaaagccaaggcc
agtaagagagaagtgatggaagcatttcaaaaagcggttgagaaagagttcaacctcatc
tcatctgtggctaaacaagagattgagcgtttccatagctcccgtgtgaatgtgctgaag
aacttcctgattggctggtgtgaactacagctcaacacagcgaaggagtttgctgaactc
tactctcagcatctggaagcttgcagaaacatgtactcagaatga
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