Cyprinus carpio (common carp): 109091604
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Entry
109091604 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109091604
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Others
Others
109091604
Endosome - Lysosome transport
109091604
Endosome - Golgi transport
109091604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
Motif
Other DBs
NCBI-GeneID:
109091604
NCBI-ProteinID:
XP_042572027
UniProt:
A0A9Q9VVM4
LinkDB
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Position
B1:39143125..39333306
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AA seq
1192 aa
AA seq
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METRLVVFPGSHFTLSTWLILSSWYVFPNVKADISCAPCMSPMQVNYAGDEHLRDPPDSG
KYPREDQKKPKLITVLYPNIGVPTAREVDGFPGIAPELERNAEEINSRAPLGNFTESALD
EELFSDEYVKSESELEPEDAALGRVKRSVPEFLQSADARSEEQRKTSGLRVDGQSKRAEV
RWNRDDEHDSRPDEPKLTSSTFALAGDSAHNHAVVYWTGKNSSVILILTKLYDFHLGSVT
ESTLWRSTDYGSTYERLNDKVGVKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISTDEGA
SYQKYRLNFFVLSLLFHHTQEDWALAYSHDQKLYSSFDFGRKWQLVHERVTPNRFYWSVT
GLDKELDLVHMEAHTPDGHCQYVTCRAQACSESSRTYPFSGYIETNSLVVQDEYVFVQVT
TTGRASYYVSYQREPFVRIKIPKYSLPKDMHIVSTDQGQVFTAVQEWNQNDTYNLYISDT
RGVYFTLALENVRTSRGLGGNSMIDLYEVAGIEGMLIANRKVENQVKTYITYNKGRDWRL
LQAPTTDLAGNPIHCVLPFCSLHLQLQMSENPYLSGSISTKSSAPGVIVATGNIGSELSY
NNVAMFISSDAGNNWRQVWLVHTVWFLDKGGALVAVKQPTVPTRHLWISFDEGRQWTRHS
FSAMPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFTRRCTEGDYQTWHLH
NQGEPCIMGQKQIYMKRRPGNYCMVGWDNSRILSAEPCICRAHDFECDYGFERRGDGNCL
PAFWFNPSTLSRSCSQGQNYLNSTGYRKVVANNCTKGVKEMYTARKQQCPNRPPRGLVLT
THDDKLTANMGSNVTFLVRLEEGDSMRTNIQLCVCVCVCVCVCVSGPVEHIQLLAPYVVI
KNKEVNLTAVVWPSHFRTLTYFWWLGNNTEVQAAPNYRFSASLCWAKVIVKLXXGDSILQ
DTRSIAIQEFFKSLLLSFSPNLDEANPDIPEWRQDVGRVIQKAVLQVADIPEEQLLVAVF
PGIPTAAELFLLPPPRNQSDGRKRTEEDLDQISEILVNALNQISVEFELKPGSRVIVYIT
QLTLAPLVDSIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMI
STVGQNDATPKITLSXFSAQKELMEKELEARAKRSVINTCESTREIPNCTSV
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggagacccgtctggttgtattccctggctcccactttactctttctacctggctaatt
ctttcctcctggtatgtttttccaaatgtaaaggcagatataagttgcgcgccatgtatg
tcgccaatgcaagtgaactacgcaggggatgagcatctgcgtgacccgcctgattctggg
aaatatccgagagaggatcaaaagaaacccaagctgatcacagttctttacccgaatatt
ggagtacccactgcacgagaggtggatggttttccagggatcgcgccggaactggaaaga
aacgcagaggagataaactcccgcgcgcctttggggaacttcaccgagtccgctttagac
gaagaattgttttcggatgaatatgtgaaaagtgaatccgaattggaacccgaggacgcc
gcattagggagagtcaaaagaagcgtgcctgagtttctgcagagcgctgatgcccgctcg
gaggagcagagaaagacctccggtctgcgggtggacggacagagtaaacgcgccgaagtt
cgctggaacagggacgatgagcacgattccagaccagacgaacccaaactgaccagcagc
acttttgctctggctggagactccgcgcacaaccacgcagtcgtgtactggactggaaaa
aacagcagtgtgattctgattctcaccaagctgtatgactttcaccttggcagtgtaacg
gaaagcactttatggagatcaacggattatggcagcacttatgagaggctgaatgataaa
gtgggagtcaagactgttttgagttacctctatgtctgccccaccaacaagagaaagata
atggtgttgactgacccagagtttgaaagcagcgttctcatcagcacggatgaaggtgcc
agttatcagaagtaccgcttgaacttctttgttttaagtcttcttttccatcacactcaa
gaggactgggctttggcttacagtcacgatcagaagctgtatagctcatttgactttggc
cgaaagtggcagctggttcacgagcgagtgactccgaatcgcttctactggtctgtaacc
ggtttggacaaggagttagatctggtgcacatggaggcccacactcctgatggccattgt
cagtatgtgacatgcagagctcaagcctgctctgaatccagtaggacatatccattttct
ggttatattgagaccaactcacttgtggttcaagatgaatacgtgtttgttcaggtgacg
accactggcagagcgagctactatgtgtcctatcaaagagaaccttttgtacgcattaaa
atccccaaatactccctgcccaaggacatgcatattgtgagcacagatcaaggtcaggtt
ttcaccgccgtccaggagtggaaccagaatgatacctacaacctgtacatatctgacacg
cgtggggtgtacttcaccttggctttggagaacgtcaggaccagccgtgggctcggaggc
aacagcatgatcgacctttacgaggtagcagggattgaaggtatgctcattgctaatagg
aaggtggagaaccaggtgaagacgtacattacttacaacaagggccgagactggaggctt
ttgcaggcgcccactactgacctggcaggaaatcccattcattgtgtgctgccgttttgc
tcgctgcacctacaactgcagatgtcagagaacccatacctctcaggctccatctccacc
aagagctctgcaccaggagtcatcgtggctacaggaaatattggctctgagctgtcttat
aataatgtggcgatgttcatttcatcagatgcaggcaataactggagacaggtatggctg
gttcacactgtgtggtttttggacaaaggtggagctttggttgccgtgaagcagcccact
gtgcccactagacatctttggatcagctttgatgaaggtcgtcagtggacgcgtcacagt
ttctcagcaatgccgctgttcgtggacggtgttctggtggaggcaggtgcagaaaatcag
atcatgacgtttttcggacactttagtcatcgttctgaatggcagctaatcaaaattgac
tacaagtccatattcaccagacggtgcacagagggagactaccaaacttggcacctacat
aaccagggtgagccatgcataatgggtcaaaagcagatctacatgaagcgtcgtccagga
aactactgcatggttggatgggacaactccaggatcctgtctgcagaaccctgcatttgc
agagcacacgactttgaatgtgattatggatttgagagaagaggggatggaaactgtttg
cctgcattttggttcaacccttccacattgtctcgaagctgcagccaagggcaaaactac
ctcaacagcacagggtatcgtaaagtggtagcgaataactgcacaaaaggagtgaaggaa
atgtacacagccaggaaacagcagtgtccgaatcgccccccgcgaggtttagtcctgacg
acccatgatgacaaactcacagccaacatgggcagcaatgtgaccttcctggtgcggcta
gaagagggtgactctatgaggacaaacattcagctttgtgtgtgtgtgtgtgtgtgtgtg
tgtgtttgtgtttcaggccctgtggagcatattcagctgctggctccatatgtggtcatt
aagaataaggaggtgaacttgacggcagtggtctggccttctcatttcagaacgctcacc
tatttctggtggctggggaacaacacggaggtacaagcagctcctaattacagattttct
gcctcgctttgttgggcgaaggtcattgttaagttgtagtgaggagactctatactacag
gacaccagaagcatcgccatacaagaattcttcaaatcgcttcttttatctttctctcct
aatctggacgaggccaaccccgacatcccggagtggagacaggatgtgggtcgggtaatt
cagaaggctgttctacaagtcgctgacattccagaagagcagctgctagtggccgtgttt
cctggcattccgactgccgccgaactcttcctgcttcctcctcccaggaaccaatcagat
ggcaggaaacggaccgaggaggatctggatcagatctctgaaatcttggtcaatgcattg
aatcagatctctgtggagttcgagttgaaacctggctcccgggtcatcgtttatatcacg
caattaactttagctccactggttgactccatcccgagacacagcagttctgctatgctg
atgcttctgtctgtggtgtttttgggtttagctgtatttctcatctacaaatttaagaga
aaaatcccttggattaacatttatgcagaggtgaaccatgagaaagagcaggagatgatc
agcacagttggccagaatgacgccacaccaaaaatcaccctgagttagttctcggcccag
aaagaactgatggagaaagagctggaggcccgtgccaaacgcagtgtgatcaacacctgc
gaaagcacaagggagatcccgaactgcacgagtgtctga
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