Cyprinus carpio (common carp): 109092013
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Entry
109092013 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109092013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109092013
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109092013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
109092013
NCBI-ProteinID:
XP_042581630
UniProt:
A0A9Q9WDY2
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Position
B6:complement(11052682..11058456)
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AA seq
583 aa
AA seq
DB search
MADIVQQRIEDRIPALEQLERDGLFTNKEVKSMLKRSTALEYKLHRTDFITYIQYEINVL
ELIKKRRARIGYDFKREEIEYPIIHRIHHVFRRATKNGRLEDVQLWLSQVAFNKEWVTKS
QLSKILSSMLAIHPDKLKXINCIMLTALWIMAAKCEMEDRNSSESTRHLFLRALRFHPEK
KKVFQEYFRMELMHSEKLRKQQQELEQAKIDVGEYTFSPEILSGKLAELLYRDAAQKIKG
AEFILSLIQIAAIFDFTKELQDTILQDLQSRYVDDCMMWDFMAKSELDAAGAPEPQSAKG
RASDTDRREEQTSLNSRKRWSQIDMYCLTVDCSLFQRKERLLRVLQSAHDAKLLQETFYK
NWLQVLLSSGDTVSATQIAITATQRFSQSLEMWIFSLQTLVHLESTEAGHLFQEALKHMN
PKESLPLWQLQADWSMTSQIPEDTETLFQKGLLSPVPAVSSTMKEKYLEWSYKTGGYKRA
RKTFTSLHEHRPFTRTFFMKMIEIEKEQETPKMSNLRDYYERALREFGSSVEDLWMECIK
EELGRHGNPENCGKLHWRAVQMLEGESVERFTTKYALLQTGHM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggctgacattgtgcaacaacgaatagaggacagaataccagcgcttgaacagttggaa
agagacggtttgtttaccaataaagaagtcaagtctatgttgaaaagatctactgctctt
gaatacaagctgcaccgaacagatttcattacatacatacagtatgaaataaacgtccta
gagcttatcaagaagaggagagcgagaattggttacgattttaagcgggaggaaattgag
tatcccatcattcatcgcatacatcatgttttcagaagggctacaaaaaatggcaggttg
gaagatgtgcagctctggctttcacaggttgcctttaataaggaatgggtcacaaagtct
cagctcagcaagattttgtcatctatgttagctatccatcctgacaaattgaaatgaatt
aattgcataatgcttacagctttgtggataatggctgctaagtgtgagatggaggacagg
aactcttcagagagcacccggcatctcttcctccgtgccttgcgctttcatcctgagaag
aagaaagtctttcaggagtatttccggatggagctcatgcattctgagaaactgaggaag
cagcagcaggagttggaacaagctaaaatagatgtgggggaatatactttttctccggaa
atcttgagtggaaaacttgctgagctgttgtacagagatgctgcacaaaaaattaaaggg
gctgaattcatcttgtcattgatacagattgctgccatctttgacttcacaaaggagcta
caggacaccatcctgcaagatctgcagagtcggtatgtggatgactgcatgatgtgggat
ttcatggctaagagtgagctggatgctgctggggctccagagccccagtctgcgaaagga
agagcttcagatacagatcgcagagaagaacaaacgtcattgaactcaaggaaaaggtgg
agtcagattgacatgtattgtttgactgttgactgttcactttttcagagaaaggagcga
ttacttcgagtcttacagagtgctcatgatgccaagcttttgcaagagacattctacaag
aactggctacaggtcctgttgtcgtcaggggatacagtatctgctacccagatcgccatc
acagccacccagcgcttcagccaatcattggagatgtggatcttcagcctccagacatta
gtccatctggagagcacagaggcgggacatctattccaggaagccctgaaacacatgaat
cccaaggaaagtctgccattatggcagctgcaggcagattggagcatgacctcacagata
ccagaggacacggaaaccttatttcagaaagggcttctgtctccagtacctgcagtgtca
tctaccatgaaggaaaaataccttgaatggtcatataaaactggtggttacaaaagggct
agaaaaacattcaccagcttacatgaacacagacccttcactaggacattcttcatgaag
atgattgagattgaaaaagagcaggagacaccaaagatgagtaacctgagagactactat
gagcgagcacttcgtgaattcggttcctcagttgaagatctctggatggagtgcatcaag
gaagagctgggaaggcatggaaacccagagaactgcgggaagctccactggagggctgtt
cagatgctggagggtgaaagtgttgagcgctttaccacgaagtacgcacttctgcagact
gggcacatgtaa
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