Cyprinus carpio (common carp): 109092034
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Entry
109092034 CDS
T05134
Name
(RefSeq) stereocilin-like
KO
K24636
stereocilin
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109092034
Cilium and associated proteins [BR:
ccar03037
]
Other cilia and associated proteins
Stereociliary proteins
109092034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
Motif
Other DBs
NCBI-GeneID:
109092034
NCBI-ProteinID:
XP_042616029
UniProt:
A0A9R0AYG5
LinkDB
All DBs
Position
A7:18423327..18444932
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AA seq
2004 aa
AA seq
DB search
MHQGGSLMLLILSIILGVACVGSIKPSSPKTIIRQSEKSSRSEDEFERNIKVLIENIRSL
SKEEQGEEASPNLHQRMSGMSAPLERMATDSTSLDTYLTIFSSLFSIDQTTLIDSFIETL
PQALICILADRQPCGWQADLTSTVSSALNEQLLSVISSVKAEACMSTSNLRMADPTVAQL
NSLQEMLTNVLSSDLSLYLQSDNFLALWNSFMDMAFPPVMSFMSDVMLSALQTPLDFLKL
GLQFGIEIPTLDQSEKCQQGDLKQLIMWGINHNVSWSFGQSLLDMILVPETPPCSFPGPE
CQATSSIQFGRNGPPSVDIPTSVLTCEQQNLNQLNETLCAAILGAKSQESYVLYQMCRAL
STLSQTELTKVWRNMCHIIKNGILPLIEPCSDPGTAQSSRIARSTLSLSELLCDYQNWTI
DGATDPALVTMCSENDRAAFILAVCNNAEVMQVLVRNPNNAWVWEFCANTSDSYIVNLYC
SYNIWTAETIDPSIVTFCWYNDMERFQFFLCDSMAFFMVVFSTEENNWLKPNCSEPPPQI
DINTFVAESCKYSEWKNVQAISPEQISICIQNDEVRFINEVCVDHKFITLLVQNSANAWV
QKYCTYSIRNPPTSPPLLNIEVWCNYNKWTNMSVDPSVVALCWQYDQIGFHQNVCCNIPL
YDKLSIHVDNQWMIRECSNNDTTSMLEQVCIYSDWSQPTVVNMTDLALCADLDTENFTRN
VCANATVFQNLLANLDGTWLLEQCSNLTAPGPGGGAGNGGGLVSFRPAEQCQYSNWALVL
PDAALLTLCWEYDQANFISFVCADSSMLTHITQEASSLRVGSLCATYTAPQTTTISGSNE
TTPQPCLTRELAKRLNWTCSTDFSAVCQPGASQVQGLRVLLRCGIKILQPRLENLMTTEV
TSMVKQATNLWVVLLLALEESQITSLRMTENIRLSVLDSVVAYMDNETNFDNKRVLLQCF
GKVLTSLMQIGRNMPTNFFLIKEYFRIPLSHLRSVLSAADSIIVREILLYYNRNTATLQL
TDDYLHTMVSVLFQIHLPKDISLFSDMGILLALATPSDILSMPLQNNINALSIINFSIKN
LSLEQQQAFGRWFSQSMSLPNMTAGSLSVIRDTGNLIAYLPFQSFQYFSPAQLLDGLDVL
MSNALTPLKQQFIAQSLTGTFRNLTVDEFRRLGNLSCLAHPSQLMAYAGTEAFSVIKDNI
RTCAIQGFSVPSNMISSMVLKSSDLQSPSSLTPQRVSELGPFLPLLGSSVLQQLTSAQLM
PALSTLASVPFTPAQASVIIDKISANLSLALPGSEHLSMLGSLVSGVKVETLWTLPTDVL
LEALPAISLQTPGLTPPQVNTIISKLWGFSSVSQWMDKVSPLLSSTPLLSVIPQVPLLLI
RDTAVHTRLWNTQQAKVLFKEAVVSHSSLSLQEFLSLGILATGVSCTDLRRLFQKLASLS
PLRDIMTFLREQPVPLHPSLKKCVFEELYRFDFFTELLGDLGSQIALSLPLSTIKKFPPD
KMDSLRKIIIQDPYYFLLLPSIKQAVLVDKMVQRLDMYTGLYTEEEFRSLGIMATFVTDE
MFLKLDRSFFVDSLEFLQGFCYSPNKRDLVAKMLEEQWTFGPVKNWTSETLNQVDRFLFF
LPKNTIQLIPLDLMSLERIERLFLSQQEWEKGEFGSLCQKPSELFEKQQFVLQFFLGFLR
IGRVPYTGLIPSCESLHVTQPAAWTIDSLRNMPQAAFRRCLELIGQDPFFSAYELLMLLT
KTKEVYGMPSSFNSSVISQLGRIATQLTLEELASLRLSEIQSISAMGAFNTWTSRQLKLL
FSVVLNSTRKTPSQLDSSTFVALGHIVCGIDAPIMRNLNPVEFSKAVLWLGRLNLSCSEQ
QLQALIGLLSHSLAFGPVSSWGSEVFIEIGAIAAGLPDIAMSALVREQIEGITPLAISLI
PAGKFAVVFNQAQIRMFTYDQAIAVTEAQRSALSTVQQTALSMVLNPWEDKPIDFRGMSL
GVAMHPSPFFYVSSVLIMLLFSLG
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagggagggagtttgatgttgctcatactcagcatcattttaggggttgcatgt
gttggctccataaaaccctcatcacccaagaccatcatcagacagagtgaaaagagctcc
aggagtgaggatgaatttgagaggaacatcaaagtgttgatagagaacatcagatccttg
tcaaaagaagaacagggagaagaggcctcaccaaatctccatcagagaatgagcggaatg
tcagcaccccttgagagaatggcaactgacagcactagcttagatacttacttgacaata
ttcagcagtttattttctatagaccagaccacgctgattgacagtttcattgaaactctt
cctcaggctttaatttgcattttggcggacagacagccctgtggatggcaagcagattta
accagtaccgtttcatctgcactgaatgaacaattactttctgtgatctcctctgttaaa
gctgaagcttgcatgtcaacatctaatctgcgaatggcagaccccaccgtggctcaatta
aactctcttcaggagatgttgacgaatgttttgtcctcagacctctcactttatctgcaa
tcagacaactttttagccttatggaatagttttatggacatggcttttccacctgtgatg
tcattcatgtctgatgtcatgttgagtgcacttcaaactccattggattttctaaaactt
ggattacagtttggtattgagatccctaccctagaccagagtgagaagtgtcaacaaggt
gacctcaaacagcttatcatgtggggcataaatcataatgtgagctggtcttttggacag
tcacttctggatatgattttggttcctgaaactcctccttgcagtttcccaggtccagaa
tgtcaggccacaagcagcatccagttcggtcgtaatggccccccctcagtggacattcct
acgtctgttctcacctgcgaacaacaaaacctgaaccaacttaacgaaaccctttgtgca
gcaattttaggagcaaaatctcaggaatcgtatgtcctttatcagatgtgtcgagcactc
agcacactctctcaaactgaattgacaaaagtatggaggaacatgtgtcacattatcaag
aatggcatcttacctcttattgagccctgcagtgatcctggcaccgcacaatcaagtcgt
atagcacggtccactctcagcctcagcgaactcctttgcgactaccagaactggactatt
gatggtgccacagacccagcattggtcacaatgtgcagtgaaaatgatcgtgcggcattc
atccttgctgtgtgtaacaacgctgaagttatgcaagtgttggtcagaaatcctaataat
gcttgggtttgggaattctgtgcaaacacatcagactcatacatagtgaacctgtattgt
tcatataacatatggactgctgaaaccatcgacccatcaatagtgacgttctgctggtat
aatgacatggagagatttcagttttttttgtgtgacagtatggccttctttatggttgtg
ttctccactgaagaaaacaactggctgaagcccaattgctctgaacctcctccacaaatt
gacatcaacacctttgtggctgagtcttgcaaatactctgaatggaagaatgtacaagca
atcagccctgaacagatctctatatgtatccaaaatgatgaggttcggtttattaatgag
gtgtgtgttgaccacaagttcatcactctacttgtgcagaacagcgcaaatgcttgggta
cagaaatattgcacctactctatcaggaatccccctacaagtccaccactgctgaatatc
gaagtttggtgtaactataacaaatggactaacatgtctgtagatccgtctgtggtcgct
ctatgctggcagtacgaccagattggcttccatcagaacgtctgctgcaacatacccttg
tatgacaagttgtccattcatgttgacaaccagtggatgattagagagtgctctaataat
gacaccacaagcatgttggagcaggtttgcatctattcagattggagccagcctactgta
gtaaacatgactgaccttgctctctgtgcagatcttgacactgagaacttcactcggaat
gtatgtgccaatgcaacagttttccagaatttgctggccaatttagacggcacctggtta
ttggagcaatgctcaaacctgactgcgcctggcccaggtggtggggctgggaacgggggg
ggcctggtgagtttccgaccagctgagcagtgtcagtactccaattgggctttggtgctc
ccggacgctgctctcctcactctttgctgggaatatgaccaggccaactttatctccttt
gtctgtgctgactcttccatgctcacccacatcactcaggaggcctccagcctccgggtt
ggcagtctctgtgccacatacacagctccccaaaccaccaccatcagtgggagcaatgaa
acaactccccagccatgcttaactagggagttagctaaaaggctaaactggacatgcagc
acagacttcagtgctgtctgccaaccaggtgccagtcaagtccagggtcttcgggtgctg
ttgcgctgtgggataaagatcctccaacctcgcttggagaatctcatgactacagaggtg
acatcgatggtcaagcaggccaccaacctgtgggttgtcctgctgttggctctagaagaa
agccaaattacctctctaaggatgacagagaatattcggcttagtgttttggactcagtt
gtcgcctacatggacaatgaaaccaactttgacaacaagcgtgtgcttttgcagtgcttt
gggaaagttctgaccagtctgatgcaaataggaagaaatatgcccactaactttttcctg
atcaaggagtatttccgcattcctctatctcatctgagatcagtgctcagtgcagcagac
agcataatcgtgagggagattctgctgtactataacaggaacacagccactttgcagcta
acagatgattacctgcacaccatggtgtctgtgcttttccaaatacacctgcccaaggat
attagcctgttttctgacatgggtattttgttggctctagctacaccttcagacatcttg
tcaatgccgctacaaaataatatcaatgcgttaagcataattaacttcagcataaaaaac
ctttccctggagcagcagcaagcgtttggtcggtggttcagtcagtccatgagcttacct
aacatgacagccggcagcttatccgttatcagagacactggtaacctgatcgcctatctg
ccctttcagagcttccagtacttctcacctgctcagctgctggatggtttggatgttctg
atgagtaacgcgttgactccacttaagcagcagttcattgctcagagtctcactggaacc
ttccggaatctcactgttgacgagttcaggaggttaggtaatctgtcctgtctggctcac
cccagccagctaatggcatatgcaggaacggaagccttctctgtgatcaaggacaacatt
aggacatgtgcaattcagggttttagtgttcctagcaatatgatatccagcatggtcttg
aaatcgtctgacctgcagtctccctccagtctcactcctcagagagtctctgagcttggc
ccttttctgccccttctgggatccagtgtcctacagcagcttacctcagcccagctcatg
cctgctctcagcaccctcgcctctgtgccttttacccctgcacaggcaagtgttatcatc
gacaagatctctgccaatcttagtttggctctaccaggctctgagcatttgtctatgctg
ggatctcttgtgagtggagtaaaggtggagactctatggactttaccaactgatgttctg
ctggaagcgttacctgctataagccttcagacacctgggctcacccctccacaggtcaac
actatcatctccaaactctggggttttagttctgtgtcccagtggatggataaagtcagt
cctttgctctctagcactccactcctcagtgtgattccccaagtccctctgctcctgatc
agagacactgctgtacacactcgcctctggaacacacagcaggctaaagttctctttaaa
gaggctgtcgtctctcactcaagtctctcactacaagaatttctatctctggggattctg
gctacaggagtgagttgcacagacctgagaagattgttccagaaactggcatctctgtct
cctctacgtgacattatgacatttctgagagagcagcctgtgccactccacccatcgctg
aaaaagtgtgtatttgaggaactgtataggtttgacttcttcacagaattacttggagat
ttgggttctcagattgctctgtcacttccgctgagtaccattaagaaatttccaccagat
aagatggattccctgaggaaaattataatacaggacccatattacttcctactgcttccc
agcatcaaacaagctgtcctggtggacaagatggttcaacgactggatatgtacactggc
ctgtacactgaagaggagtttcgttcgctagggatcatggctacatttgtgacagatgaa
atgtttttgaaattggataggagcttttttgttgatagtctggagttcctacaaggattc
tgctacagtcccaataaaagagacctggtggcaaagatgctagaggaacagtggacattt
ggccctgtgaaaaactggacatcagagactctgaaccaagtggaccgcttcttgtttttt
cttccgaagaacactattcagctcatccccttagatttgatgagcttagagcgcatcgag
aggctgttcctgagtcagcaggagtgggagaaaggagagtttggctctctgtgtcagaaa
ccctcagagctgtttgaaaagcagcagtttgtgcttcagttcttcctcggcttcctcaga
attggacgtgtcccttatactggactgatcccctcttgtgagagcctgcatgtgacacaa
cctgctgcctggactattgacagccttagaaacatgccacaagctgcatttcggaggtgc
ttggagctcattggccaggatccgtttttcagtgcatacgagctgttaatgctccttaca
aagaccaaagaggtgtatgggatgccttcctcttttaactcttcggtgatctctcagttg
ggtcgcattgccactcagctcacacttgaagaattggcctctcttagactctctgaaatt
cagtcaatttcagcaatgggggctttcaacacatggaccagcagacagctgaaattactg
ttctccgtggttctgaactcaaccagaaagactcctagccagttagactccagcactttt
gtggcattggggcacattgtgtgtgggattgatgcaccaatcatgcgcaacctgaatcca
gtggagttcagtaaagcagttttgtggcttggccgtttgaatttgtcttgctctgagcag
cagctgcaggcattgatagggctgctcagtcatagcttggcatttggaccggtcagctcc
tggggatcagaggtcttcattgagatcggagcgattgcagcgggcctacctgacatagcc
atgtctgctttggtgagggaacaaattgaaggaatcaccccacttgcaatctctctcatc
ccagcgggcaaatttgcagtagtgtttaaccaggcacagattcgtatgttcacctatgat
caggccattgctgtgactgaggcccagcgctccgctctgtctacagtacagcagacggcc
ctgtccatggtgctcaacccctgggaggacaaacccattgatttcagaggcatgtcactg
ggagttgcaatgcaccccagtccttttttctacgtctccagcgtcctgataatgctgctg
ttttctctgggatga
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