Cyprinus carpio (common carp): 109092048
Help
Entry
109092048 CDS
T05134
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109092048 (nsun5)
Enzymes [BR:
ccar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109092048 (nsun5)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Other ribosome biogenesis factors
109092048 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Methyltransf_31
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
109092048
NCBI-ProteinID:
XP_042588842
UniProt:
A0A9Q9WSM9
LinkDB
All DBs
Position
B10:16681848..16686349
Genome browser
AA seq
482 aa
AA seq
DB search
MALYLKAAEILEKAEQKKGAVKTLVYESKFQNIKQLFALVCETQKYSSVLQEIINSTKLL
KETKLRIHLAKVLVYDLLIGHGVKCGGAWKTMMLKHCSRLNAALARIKIKRKVSRNQDLL
PASFQQTQDDVIPRYVRVNTLKTTLEDVIDYLKREGFSYQGTASGLEDLDRLSGKTFLCD
LHLQDLLVFSAKTVFHDHFLYKAGHIILQDKASCLPAFLLNPQVGSHVIDACAAPGNKTS
HLAAIMKNKGKLFAFDLDAKRLSTMSTLLLRAGVTCHQLANQDFLKVDPQSSEYKEVKYI
LLDPSCSGSGMVCLRDEVSEPQDEGRLQALATFQQRCLNHALQFPQVQRVVYSTCSIHSQ
ENEEVVSACLQQNPAFRLVYLLPNWLERGHEPFTECLRASTAKTRTHGFFVAMLERRPPQ
TDKENLVITTLASGGEEKQDTHQSGPSDEEQENMETENEQPTNPESKKKRRRNRKKHKQQ
ES
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcactttacctgaaagcggcggagattctcgagaaagcggagcagaaaaagggtgca
gtgaaaactctggtttatgagagtaaatttcaaaatatcaagcagctctttgcccttgtg
tgtgagacacagaaatactcttcagttctgcaggagatcatcaacagcaccaagctcctg
aaagaaacaaaactgaggatccatttagctaaggtgctggtgtatgacctgctcatcggt
cacggggtgaaatgtggaggtgcctggaagacgatgatgctgaagcattgctccagacta
aatgctgccctggcgagaatcaaaatcaagagaaaagtcagtcgaaatcaagacctgctg
cccgccagtttccagcagactcaggatgatgtgattccacgctatgtgcgagtgaacact
ctgaaaaccactcttgaggatgtcattgactatttaaaacgagagggattttcatatcaa
ggaacagcaagtgggctcgaggatctcgatcgtctgtctgggaagacatttctgtgtgat
cttcatctccaggatcttctggttttcagtgcaaaaactgtctttcatgatcacttcctt
tataaagcaggacacattatattgcaggacaaggccagctgtcttcctgctttcctccta
aacccccaggttggcagccacgtcattgatgcttgtgcagctccagggaacaaaaccagc
catctagctgccataatgaaaaataaagggaaattgtttgcatttgatcttgatgcaaaa
cgtctgtccaccatgagcactcttcttcttcgtgccggggtcacatgtcatcagctggcc
aatcaggattttctgaaagtagatccacagagctcagagtacaaggaagtcaagtatatc
cttctggacccctcctgcagtggatcagggatggtttgtctgcgggatgaggtctcagag
ccacaggatgaggggcgtctgcaggcgctggctacatttcagcagcgctgtctcaaccac
gcgctgcagttccctcaggtacagcgtgtcgtctattccacctgctccattcactcacag
gagaacgaggaggttgtgtcagcatgcttacagcagaatcctgctttcagactagtttat
cttcttccaaactggcttgagaggggtcatgagcctttcaccgagtgccttcgtgccagt
acagcaaaaacacgcactcatggcttctttgtggccatgctggagagacgccccccacag
acagataaagaaaacctagtcatcacaacattggcatctggtggagaggaaaagcaggac
acacatcaatctggtccatctgatgaggaacaggagaacatggagactgaaaatgagcaa
ccgacaaatccagaatcaaagaagaaaaggaggagaaacagaaagaagcacaaacagcaa
gaatcctga
DBGET
integrated database retrieval system
