Cyprinus carpio (common carp): 109092238
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Entry
109092238 CDS
T05134
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03271
Virion - Rotavirus
ccar04145
Phagosome
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04514
Cell adhesion molecules
ccar04530
Tight junction
ccar04810
Regulation of actin cytoskeleton
ccar04820
Cytoskeleton in muscle cells
ccar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
109092238 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109092238 (itgb1a)
04514 Cell adhesion molecules
109092238 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109092238 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
109092238 (itgb1a)
04530 Tight junction
109092238 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109092238 (itgb1a)
04810 Regulation of actin cytoskeleton
109092238 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109092238 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109092238 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109092238 (itgb1a)
04515 Cell adhesion molecules [BR:
ccar04515
]
109092238 (itgb1a)
04090 CD molecules [BR:
ccar04090
]
109092238 (itgb1a)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109092238 (itgb1a)
Exosome [BR:
ccar04147
]
Exosomal proteins
Proteins found in most exosomes
109092238 (itgb1a)
Cell adhesion molecules [BR:
ccar04515
]
Integrins
Integrin beta subunits
109092238 (itgb1a)
CD molecules [BR:
ccar04090
]
Proteins
109092238 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
109092238
NCBI-ProteinID:
XP_042569972
Ensembl:
ENSCCRG00000038069
UniProt:
A0A9Q9VRQ8
LinkDB
All DBs
Position
A24:complement(2271422..2302437)
Genome browser
AA seq
801 aa
AA seq
DB search
MDLKLLFMSTLFGIICCSSAQQEGNECIKANALSCGECIQVGAKCGWCTDTEFLKQGEPT
SARCDELESLMKRGCDAARIENPHGGQRILKNKAVTNRKKGAEKLRPEDITQIQPQKLSL
NLRSGEPQNIKLRFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGHQFNSLVGKQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGRC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIVDAYNSLSSEVILENSKLPEGVTITYQSHCKNGVVNEGESGRKCSNISIG
DEVSFNINITAQGCPKQGKPESIKIKPLGFTEEVEILLNFICECDCHKQGIKNSDMCHNG
NGTFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKK
RDNPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTCL
ASNKQICNGRGNCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNTEKEVHVVETL
ECPAGPDIIPIVAGVVTGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTENP
IYKSPINKFSNPNYGRKAVAL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctacttttcatgtcaacattattcgggatcatttgttgcagcagcgca
cagcaagagggcaacgagtgcatcaaagccaacgctttgtcctgtggcgagtgcatacaa
gtgggagctaaatgtggatggtgcactgatacagagtttctgaagcagggagagccgacg
tcggcgcgctgtgatgagctggagtcgctcatgaagagaggctgcgacgccgccaggatc
gagaaccctcacgggggccaaaggatcctcaagaacaaagcagtgaccaaccgcaagaaa
ggagcggagaaactccgacccgaggacatcactcagatccagcctcagaaactcagcctc
aacctcagatctggggaacctcagaatatcaaactgaggttcaagagggcggaggactat
cccatagacctgtactatctgatggacctgtcctactccatgaaggatgacttggagaac
gtcaagaacctagggactagtctgatgaaggaaatgtccaagatcacctcagatttcagg
ataggttttggctcttttgtggagaagacggtgatgccgtatatcagcacgactccagcc
aagctcctgaacccctgcacaggggaccaaaactgcaccagtcccttcagctacaagaac
gtgctgaaactgaccagcaacgggcaccagttcaacagtctggtgggaaagcagcagata
tctggcaacctggactcaccggagggggggtttgatgccatcatgcaagtggctgtctgc
ggagagcacatcggctggagaaacgtcactcgtttgttggtgttctccacagatgcaggt
ttccattttgccggcgatggcaaactaggtggaatcgtgcttcccaatgatgggagatgc
cacttagaaaacaacatgtacaccatgagccattattacgattacccgtccatcgcccac
ctggttcagaaactgagtgaaaacaacatccagaccatctttgcagttacagaggagttc
cagcctgtttacaaagaacttaaaaacctgatcccgaagtctgcagtcggcacgctttca
gcaaactccagcaatgttatcaatctcatcgttgatgcctacaattctctttcctcagag
gtgatcctggagaacagtaagcttcccgaaggagtgaccatcacgtatcagtcgcactgt
aagaacggagtggtgaacgagggagagagcggaaggaagtgctcaaacatctccatcgga
gacgaggtatcattcaacattaatatcacggctcaaggctgccccaaacaaggcaaacct
gaaagcattaagatcaagcccctgggcttcaccgaggaggtggagatcttgctcaacttc
atctgcgagtgtgactgtcacaagcagggcatcaagaacagtgacatgtgtcataacggc
aacgggacgtttgagtgtggagcctgcaggtgcaataagggacgtgtgggcagacagtgt
gaatgtcgaaaagacgaggtgtccaccgaggacctggacaagaactgccgcaaggacaac
ggcacggacatctgcagcaataacggcgagtgtgtgtgtggcacctgcgagtgcaagaag
agggacaatcctgaagagcgctacagcggcaaattctgcgagtgtgacaacttcaactgc
gaccgctccaataataaactctgcggaggacacggccgctgtgagtgcagggtgtgtatc
tgtgatgctaactacacaggaagtgcgtgcgactgctctctcgacacctccacctgctta
gcctccaacaagcagatctgtaacggcagaggaaactgtgagtgcgggacctgcaggtgc
accgaccccaagttccaggggcccacctgtgagatctgccccacctgccccggagtctgc
actgagcacaaggagtgtgtgcagtgccgagcgtttggcacaggagagaagaaagacact
tgtgagagagactgtagctacttcaacctgatcaaggtgaaggacagagataaactccct
cagccggtgcaggccttccccctcatgcactgcaaggagagagacgccaacgactgctgg
ttctactacacctacgccgtcaacaacacggagaaggaggtgcacgtggtggagacttta
gagtgtccggcgggtcctgacatcattcccatcgtagcgggcgtggtcacaggcatcgtt
ctgattggtctagctctgctgctgatctggaagctgctcatgatcattcacgaccgccgc
gagttcgccaagtttgagaaggagaagatgaacgccaagtgggacacgacagagaatcca
atttacaagagccctattaataaattcagcaacccaaactatggacgtaaagctgtggct
ctataa
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integrated database retrieval system
