Cyprinus carpio (common carp): 109092248
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Entry
109092248 CDS
T05134
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109092248 (smc5)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109092248 (smc5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
OmpH
AAA_29
Nuf2_DHR10-like
FKBP15
AAA_25
GCN5L1
ATG17_like
CCDC39
Motif
Other DBs
NCBI-GeneID:
109092248
NCBI-ProteinID:
XP_042588134
Ensembl:
ENSCCRG00000039596
UniProt:
A0A8C1X2U7
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All DBs
Position
B10:complement(5423387..5444483)
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AA seq
1073 aa
AA seq
DB search
MDLPQKRKRISYELTNSQTSSREAAPSSSTNGQAGGFVEGSILRITMRNFLTYDHSEVFP
GPKLNMIVGANGTGKSSIVCAICLGLAGKTAVLGRGDKVGLYVKRGCSKGSVEIELYRAS
GNLIITREIQVENNQSTWMLNKKHTSQKAVEEAVKELHIQVGNLCQFLPQEKVGEFAKMS
KIELLEATEKSVGPPEMYEFHCELKTFRSKERDLENVCKEKANFLEKARQRNERNKLDVE
RYYMKKRHLDRIQMLEKKKPWVEYETARKELEGVKKEREEMKKKLKSLKEAQEPLLRKIR
SVESQLQPIEQQMKELTAGIRDATQKCKQKHDQLEYRNKEVDDIRQDLSLKQTEEADRQK
RIGHTQLMIKDLQKELQNMGSMEDVTPQIEAVNAELRKIQEEKAKLEGEMSDLRRDKDEA
FGELNRLQNRQRSLDDMMKVKEDKLRTRFRDTYTALKWLRDNRDRFEGNVYEPMMLVINV
RDSRHAKYIESHIPLNDLRAFVFQRQEDMEKFMTEVRDTQRLRVNTVIAPEESCSRRPPS
RPLETLKPYGFFSYLRELFDAPEEVMSYLCYQYKVNDVPVGTEKTKSMIEMVIRELQMRM
IYTAEEKYTVKKSNYSSNVVSSNSALRPSQFLTMTVDADERRQLEEQLRAAQRQVQSIDQ
RMAAIREQQAKLDRRDNELRANKKKLSELKGKKRQLEQKISTKQDSLRQMEQNEINLQAI
EEETNAKIAAVNNKKVAIMEEYLGHMQMKARLSMEKVYLALQSAGLSAEKTKLETDCRDS
SAELKRAEVVYTKLDQVKNNLLTTCKTLMRRASEICNMTPGETAVPEELHQAFSQLPDTL
DEIDAMLNEEKTRAECFTGLSDAVVEEYNRREREIQNMEKELDDKTNALTTYRQNIAEAK
ERWLNPLKQLVDQINERFSDFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFRSSTQLHE
LTPHHQSGGERSVSTMLYLMSLQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACGVN
TSQYFFITPKLLQNLKYAEQMTILCVHNGPYMLPPHKWSEKAFIRRAKRRQIP
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggacctgccgcagaaaagaaaacgaataagctacgaattaaccaactcacaaacctcc
agccgcgaagctgcaccgtccagcagcactaatggccaagcgggaggtttcgtggagggc
tctatcctccgcatcaccatgcgcaacttcctcacatacgaccactcggaagttttcccc
ggacccaaactgaacatgatcgtgggagccaacggcactgggaagtccagtatagtgtgt
gccatctgcctgggcctggcgggaaaaacagccgtgctgggccgaggagacaaggttggt
ctgtatgtgaagcgagggtgcagtaagggttcagttgaaattgagctatacagagcgagt
ggaaacttgataatcaccagagagatccaggttgagaacaaccaatccacatggatgctc
aataaaaaacacaccagtcagaaggctgtggaggaggctgtgaaagagctgcacattcag
gtcgggaacctgtgtcagttcctaccacaggagaaggttggagagtttgctaagatgagt
aagatcgagcttcttgaagccactgagaaatcggtcggcccgccagaaatgtacgagttt
cactgcgaactcaagacgttccgcagcaaagagagggacctggagaatgtgtgtaaggag
aaagccaacttcctggagaaggccagacagaggaatgagaggaacaaactggatgtagag
cgctactacatgaagaagagacacttggacaggatccagatgctagagaagaagaaaccc
tgggtggagtatgaaacggcacgtaaagagctcgagggggtgaagaaggagagagaggaa
atgaaaaagaagctgaagtcgctaaaagaagctcaggagccgctgctcaggaagatccgc
tcggtggagagtcagctgcagcccatcgagcagcagatgaaggagctgactgccggtatc
agagacgcaacgcagaaatgtaagcagaaacatgatcagcttgaatataggaataaagag
gttgatgacatcagacaggacctgagtctgaagcagaccgaggaggcggaccgacagaag
cgcatcggacacacgcagctcatgatcaaagacctgcagaaggagctgcagaacatgggc
agcatggaggacgtcacgcctcagattgaggctgtcaacgcagagctgaggaaaatccag
gaagaaaaagccaaactggagggcgagatgtcagacctgcgcagagataaagacgaagcc
tttggagaattaaaccgtttgcagaatcgtcagaggagtctggacgacatgatgaaggtg
aaagaggataaactgcgcacccgttttcgtgacacctacaccgccctcaagtggctgagg
gataaccgtgatcgttttgaaggcaacgtctatgagcccatgatgctggtgataaatgtc
cgtgattctcggcacgcaaaatacattgagagtcacattcctctcaatgatttgagagcg
ttcgtctttcagagacaggaggacatggagaagttcatgacagaggtgcgagacacacag
aggctgcgagttaacaccgtcattgctccagaggagtcctgctctagacgaccaccatca
cgcccactcgagactctgaagccttatggcttcttctcatatttgcgtgagctgttcgat
gctcctgaggaggtcatgagttacttatgctatcagtacaaagtcaatgatgtgcctgta
gggacagagaagaccaagagcatgatcgagatggtgatcagagagcttcagatgaggatg
atctacacagcggaggagaagtacactgtgaagaaatccaactactctagtaacgtggtc
tccagtaactcggccctgcgaccctcgcagttcctcactatgaccgtagatgcagatgag
agacgccagctggaggagcagctgagggcagcacagaggcaggtgcagagcattgatcaa
cggatggcagccattcgtgagcaacaagctaaactggaccgccgtgataatgagctgcgt
gctaacaagaagaaactgtctgagctgaaaggcaagaagagacaactggagcagaaaatc
agcacaaaacaggacagtttacggcagatggagcagaatgagatcaacttgcaggcaatt
gaagaggaaacaaatgccaagatcgctgctgtaaacaacaagaaagtggccataatggag
gagtatttgggtcacatgcagatgaaggccagactgagtatggagaaggtgtacttggct
cttcagagtgctggtctctctgctgagaaaaccaaactggagacggactgcagggacagt
tcagctgagctcaagcgagcagaggtggtatacaccaaactggaccaggtcaagaacaat
ctgttgaccacgtgtaagactctgatgaggagggccagtgagatctgtaacatgaccccc
ggagagacggccgtcccagaggaactacaccaagccttcagccagttgcctgatacactg
gacgagatcgatgccatgctgaatgaggagaagaccagagccgagtgcttcaccggcctc
agtgatgctgtggtggaggagtataacagacgtgagcgggagattcagaacatggagaag
gagctggacgacaagaccaacgctctgacaacctacagacaaaacatcgctgaggccaaa
gagcgctggctgaatcctctgaagcagctggtggatcagatcaacgagcgcttcagtgat
ttctttcgctccatgcagtgtgctggagaggtggatctgcactcggagaacgaggaggag
tatgataagtacggcatccgcatccgagtgaagtttcgcagcagcacgcagctgcacgag
ctgacgcctcaccatcagagcggaggagagcgcagtgtgtccaccatgctgtacctcatg
tccctgcaggagctcaaccgctgccccttcagagtggtggacgagatcaaccagggcatg
gatcctgtcaatgagagacgtgtgtttgacatcgtagtgcggacagcgtgtggtgtgaac
acgtctcagtatttcttcatcacacccaagctcctacagaacctgaagtacgcggagcag
atgactatactgtgtgtgcacaacggaccctacatgctgccgccacacaaatggagcgag
aaagccttcatcagacgcgccaaacgcagacaaatcccctga
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integrated database retrieval system
