Cyprinus carpio (common carp): 109092294
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Entry
109092294 CDS
T05134
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109092294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109092294
03036 Chromosome and associated proteins [BR:
ccar03036
]
109092294
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109092294
Coactivators
SAGA/TFTC/STAGA complex
109092294
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109092294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
109092294
NCBI-ProteinID:
XP_018961597
UniProt:
A0A9Q9VC87
LinkDB
All DBs
Position
A11:complement(12300461..12317088)
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AA seq
819 aa
AA seq
DB search
MVTTLIGTSTVQTLNGGNAMDPHTESGTPVSSGPSSSSDDASASVPVVNNGPGVAKGLGN
VTVAPSPNTVIQSSYGNPPAAASSAGPSVTVVRASMQTAGTCLTINGSNNINTVSATVAN
VATPGITTTATTTSTTTTTPLLMNQTPASVPASKSEATKTIIQPAGTMTLGPGVAKGAVL
QGVARTAAPATVAAAAGSSPAIRAIAPQVLAPRLPQSTPGQNIQNIQLPPGMVLVRSDSG
QLLMIPQQMLAQMQAQSQAARPAAPTSTTPGQITPAQAPGTPLMARQVTPTTIIKQSPPT
ASSTATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTPATGTSVSSATETMENVKKCRNFL
STLIKLATSGKQSSETVANVKELVKNLLEGTIEAEEFTSRLYKELNSSPQPYLVPFLKRS
LPALRQLTPDSTAFIQQSQALQAPAVVLTSTNTTGATATAPRTLIQPALSNSSQTASLVL
QPPQQGAIVKPPQVTLTTTPMVTLRGQPHGHIVVGQPQVQLKQIQTVAVKQGVVSSTKLA
PGSMSIALAQKNKAKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVMRS
CKDEAFLSASMLQHKILEIGQRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKNM
TYKEDSRYEQVEDVRSQLKFFEQLDLLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQ
KAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPSLGTDAEGSGLCVSASGGLNAGA
SRQYTRQRITRVNLRDLLFCLENERSTSHSQLLYRAFLK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgatcgggacgtccacagtgcaaactttgaacggaggcaatgcaatg
gatccgcacactgaaagcggcactccagtgtccagtggcccatcatcatcatcagacgac
gcttcagcttctgtcccagttgttaataacgggcccggggtggcgaaaggactcggaaac
gtcactgtcgcgccaagcccaaacacagtgatacagtcttcatacgggaatcctccagcg
gcagcatccagtgcaggaccctcggtgacagttgtcagggcatctatgcaaactgctgga
acatgtttaactattaacgggagtaataatattaacaccgtttcggcgactgtagccaat
gtagcgaccccgggaataactactactgctactactacttctactactacaacgacccct
cttttgatgaaccagactcctgcttctgtcccagcgagcaagtccgaggctactaaaact
atcatccagcccgccggcaccatgactctcggtcctggagtggccaagggggctgttttg
caaggggttgcgaggactgcagcaccggcaactgttgcagcagcagcgggatcgagccct
gccatcagggccattgcgccacaggtgttagcgccccgactccctcagagcaccccggga
cagaacattcagaacatccagctacctccaggtatggtgttggtgcgtagtgacagtggt
cagttactgatgatcccacagcagatgttggcacagatgcaggcccagtctcaggccgcc
cgccctgctgcccccaccagcaccacccctgggcagatcacccctgcacaggcacctgga
actcctctaatggcccgacaggtgactcctaccaccatcataaagcagagccctcctaca
gccagcagcacggccactaccacactccagagaccaccggtacagcaggcctcctctgtg
ggtgcagtgttgtcagtgcaggcaggaaccgcccagaggactgtgactcctgccacgggg
accagtgtctcctcggcaacggagacgatggagaatgttaagaaatgtaggaacttcttg
tccacgctgataaagctggccactagcggtaagcagtcatcagagactgtcgccaacgtt
aaagagctggtcaagaacctgctggaaggaacgattgaagcagaggagttcaccagcagg
ctctacaaagagctcaactcctctcctcagccttatctagtgcctttccttaagaggagt
cttccagctctgagacagctcactcctgactccacggccttcatccagcagagccaggcc
ctccaggcgcccgctgtggtgctaaccagcaccaataccactggtgccaccgccacagcc
cctcgcacgctcatccagcctgccctcagcaactccagccagactgcctctctggtattg
cagcctccacagcagggggcaatagtgaagccccctcaggttaccttgacaaccactccc
atggtgacgctcaggggtcaaccccatggccacatagtggtgggtcagcctcaggtgcag
ctcaaacagatccagacagtggctgtgaagcagggtgttgtgagtagcactaaactggct
ccgggctccatgtctatagcgttggctcagaagaataaagcaaaggatggtgctggagga
actttcagggatgatgacgacattaatgacgtggcctcaatggcaggcgttaatctttcg
gaggagagcgctcgtatcctggccaccaactcggagctggttggggcagtcatgcggtct
tgtaaggatgaagctttcctctccgccagcatgctacagcacaagatactagagataggc
caaaggtttggagtgacagagctgggtcccgaggtcgtaaacatagtctctcatgccact
caacagagactgcaaaaccttctagagaaggtctcattgatcgcccagcaaaagaacatg
acttacaaggaggatagtcggtacgagcaggtggaggatgttcgctctcagctgaagttc
ttcgagcaacttgacctgttggagaaacaaaagaaagaagaacaggagagagaaatttta
atgaaagcagctaagtcacgctcacgacaagaggaccccgagcagctgcggctgaaacag
aaggccaaagagatgcagcagcaggaattggctcagattcgacagagagatgccaacttg
acggcgttggcggctattggacctagaaagaaaagaaaactggattctccttcacttggg
actgacgcagagggctcaggtttgtgcgtgagtgcatccgggggcttaaatgcaggagcg
tcgaggcagtacactcgccagcgcatcacgcgtgtaaacctcagggatctgctcttctgt
ctagagaacgagagaagcaccagccactcacaactgctctaccgagcctttctcaaatag
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