Cyprinus carpio (common carp): 109092315
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Entry
109092315 CDS
T05134
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109092315 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109092315 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ccar04031
]
109092315 (rhot1b)
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109092315 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
109092315 (rhot1b)
GTP-binding proteins [BR:
ccar04031
]
Small (monomeric) G-proteins
Rho Family
Miro
109092315 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
EF-hand_7
MMR_HSR1
EF-hand_1
RsgA_GTPase
AAA_22
FeoB_N
EF-hand_5
AAA
AAA_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
109092315
NCBI-ProteinID:
XP_042581631
Ensembl:
ENSCCRG00000022542
UniProt:
A0A9R0A2L3
LinkDB
All DBs
Position
B6:11089047..11108833
Genome browser
AA seq
662 aa
AA seq
DB search
MRKDVRILLVGEPNVGKTSLIMTLVSEEFPAVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINERTDKDSRVPLILVGNKS
DLVEHSSMETVLPIMNKYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEKKE
MRSACVRALTRIFKVSDLDNDGILNDHELTFFQRTCFNTPLAPQALEDVKNVVRKNLTDG
VRDNGLTLKGFLFLHTLFIQRGRHETTWAVLRRFGYDDDLELHQDYLFPLLKIPPDCTTE
LNHNAYLFLQSVFDKYDKDRDYALSPEELMDLFDVFPYVPWGLDVNSTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIIAEQESQASAIAVTRDKKHDLQKKQTQRNVFR
CHVFGITGSGKTGFLQGFLGRNLVRQRAIKEEHKSYYAISTAHVYGQEKYLLLHEIFPDF
DFLSETELSCDIVCLIYDVSNPCSFEYCAQIFKQYFMDSKTPCMLIAAKSDLPETKQQYC
MTPLEFCRKHKMPPPQSYTCNTAVAPSKDIFIKLTTMAVYPHARLRCMCTCNRCTFCLCQ
NFLNSELVQTVRTKLYTVIFSRFSGWLYLGSSPFLCTYLSCFYRNSSSFFFSLFNYSHSD
SH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagacgtgaggattctgttggttggagaacccaatgtggggaagacgtctctg
atcatgacacttgtcagtgaggagttcccagcagtggttccttacagagctgaggagatc
actataccagcagatgtcacaccagagagagtccccactcatatagtggactactcggaa
gctgaacagacagatgaacaactgtaccaagagatatcaaaagccaatgttatatgtata
gtctactcagtgaacaacaagaagtctattgagaaggtgacaagtcattggattcctttg
ataaatgagagaacagacaaagacagcagggttcctctgatccttgtggggaataaatct
gatctggttgagcacagcagtatggagactgtccttcccatcatgaacaaatacacagag
atagagacctgtgtggagtgttcagcaaagaatctgaagaatatttcggagttattttac
tatgcacagaaggctgtccttcaccctacagggcctctctactgtccagagaagaaagag
atgaggtctgcctgtgttcgggcattgacacgtatctttaaggtgtcagatttggacaac
gatggcattctcaatgatcatgagcttaccttttttcagagaacttgtttcaacacccca
ctagccccacaggcccttgaggatgtaaaaaatgttgtgagaaaaaacctgacagatgga
gtgcgtgacaacgggctcactctcaaaggtttcctcttcctacatactctcttcatccaa
agaggaaggcatgagacaacgtgggctgtactgcggaggtttggatacgatgacgatctt
gagctgcatcaggactacctgtttcctctgttaaaaataccaccagactgcaccacagag
ctcaatcacaatgcttacctgttcctacagagtgtttttgacaaatatgataaggacaga
gactatgcattgtcccctgaagagcttatggatctatttgatgttttcccctatgtcccc
tggggattggatgtgaacagtacagtttgcactaatgaccagggctggatcacataccaa
ggctatctctctcagtggacgttaacgacttacctggatgtacagcgatgtcttgaatat
cttggttaccttggttactctatcattgctgagcaggaatctcaggcctctgccatagca
gtgacccgtgacaagaagcacgaccttcagaagaaacagacgcaacggaatgtatttcgc
tgtcatgtgtttggaataactggaagtggcaaaactggtttcctgcagggcttcctcggc
agaaaccttgtgcgtcagagggccataaaagaagaacacaaatcatattatgcaatcagc
actgcacatgtgtacggacaggagaagtacttgttgctccatgaaatctttccagatttt
gatttcctgtctgagactgagctttcatgtgacattgtgtgtctgatctatgatgtgagc
aacccttgttcttttgagtactgtgcacaaatcttcaagcaatacttcatggatagtaag
actccatgtatgttgattgctgcaaagtcagacctgccagaaacaaagcagcaatactgt
atgactccactggaattctgtcgcaagcacaagatgccgccgcctcagtcctacacctgt
aacacagctgtggctcccagcaaagacatcttcatcaagctcaccaccatggctgtgtat
ccccatgcgcgtctgcgctgcatgtgtacctgtaacaggtgtaccttctgtctgtgtcag
aacttcctgaactctgagctcgtgcagacggttcggaccaaactctacactgtcatcttt
agcaggttctcaggatggctttatcttggttcatcacctttcctctgcacttatctctct
tgcttttatcgtaattcatcctctttttttttctctctatttaattattctcattctgat
tcacattaa
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