Cyprinus carpio (common carp): 109092344
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Entry
109092344 CDS
T05134
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109092344 (gata6)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109092344 (gata6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
109092344
NCBI-ProteinID:
XP_042573730
UniProt:
A0A9Q9VZU2
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All DBs
Position
B2:complement(4090839..4096001)
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AA seq
500 aa
AA seq
DB search
MDLGDNSWSMVKREVSSSSPGSPAEQSYLNTDRRDRLRSPALTHLDAVGTRRAEGRPLHS
YVHFGHPNNALPNSDDVTLFTDLDQGNKLIISGGHTRETHKGGLIVDPADMYQTLAIAAA
QSQAGYNDTPSAGYMHSNPNSPVYVPTSRVGTMIPSLSYLQPSVSSQPSHAVSSHSVWSQ
SAPESPSYSTGSPHTSNRFHYSPSPPMNNGTSRDTSYTNPLNVNSRDQYLSRPISGSYTS
PYPQYVGPQLSQLPAAWPAGPFENSMLHSLQSRSAPLSIRGPNGDLLEDMMESRECVNCG
SISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRMSSSRRVGLSCANCQTSTTTL
WRRNADGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKTKGSSGSSSVPMTP
TSSSSSNSEECTKNSPSSTQVPVTSVNSSTLVGQVDVPGTTGSMVKYPGQESLYTNVGLT
STADVATSVRGDTWCPMALA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggtgataacagctggtccatggtcaagcgcgaagtgtccagcagcagccca
gggtctccggctgagcagagctacctgaacactgaccgcagggaccggctgagatcaccg
gcgctgacgcacctggacgcggtgggaacgcgtcgcgccgagggcaggcccctacactcc
tacgtccactttggccatcccaacaacgccctgcccaattctgacgacgttacactcttc
acggatttagaccagggcaacaaactcatcatctcaggtgggcacaccagggagacgcat
aagggaggcttaattgtggaccctgccgacatgtatcagaccctggccatcgccgcggcc
cagagtcaggccggttataacgacacgccatcggccggttacatgcactccaacccgaat
tctcccgtttatgtgccgacgtctcgcgttggaacgatgataccgagtttatcgtaccta
caacccagcgtgtcgtcgcagccgagccatgcggtcagcagtcattcggtctggtcacag
tcagccccagagagcccgtcctacagcactggaagcccacatacctccaaccgtttccac
tactcccccagtccgcctatgaataacggcacatcgagggataccagctatacgaatcct
ctgaatgtaaacagtcgagaccagtacctttcacggccgataagtggatcttacacaagc
ccatatcctcagtatgttggaccgcagctatcacagttaccggcggcgtggcccgcgggg
cccttcgagaactccatgctgcattccctgcagtccagaagcgcaccgctgtctattagg
gggccaaacggtgatttgctggaggacatgatggagagccgcgagtgcgtcaactgcggc
tccatttccaccccgctgtggagacgcgacggcacgggtcactttctctgtaacgcctgc
ggtctgtacagcaaaatgaatggactcagccgaccattaattaaacctcagaagcgtatg
tcgtcttcaaggcgtgtcggcctgtcctgcgcgaactgccagaccagcactacaacattg
tggcgcagaaacgcagacggagaacccgtatgcaatgcgtgtggactttacacaaagtta
cacggggtgcccagaccccttgccatgaagaaagaaggtattcagacaaggaaaagaaaa
ccaaaaaccttgaacaaaacaaagggatcatctggaagtagttctgtccccatgactcca
acttcttcatcgtcttctaattcagaggagtgcacaaagaacagtccttcatcaacacag
gtgcctgtaacatcagtcaactcttccacgctggtgggccaagtcgatgttccaggcacg
acgggatccatggtgaaataccccggccaggagagtctgtacacgaatgtaggcctgacg
tccacagctgacgtggcaacctccgtgagaggggacacttggtgccccatggccttggcc
taa
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