Cyprinus carpio (common carp): 109092377
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Entry
109092377 CDS
T05134
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109092377
03036 Chromosome and associated proteins [BR:
ccar03036
]
109092377
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109092377
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109092377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
109092377
NCBI-ProteinID:
XP_042613401
Ensembl:
ENSCCRG00000040926
UniProt:
A0A9R0AYS2
LinkDB
All DBs
Position
A6:817334..865890
Genome browser
AA seq
1772 aa
AA seq
DB search
MEDKKKQEETNKDTAQKPATEQKTKVPDSVKPNPSIPSNPILTLNLPVPCPASTSNGKRS
PCNSLQQQLPPLQQPSPRYVPREIPPRFRQQEQRQLLKRGQPLPTGALNPTSACPQSGVI
SPPETPTSKRHTGLPHQSGQGDQHENCLWSIPVSKSNSSNRDKVIINCNKTDTWPSNTYG
KSHHTPECTLDAECTSEVVSNSSSTIMATGASQQGHYPISKASINLSSSMVSSQSSPTRG
WVLEGNNDLSLGSRGQSKWGASNLNLNPSANPAAWPALGHEGPGVGSGPSSMVCSNPLSL
SMCGQGGVPPPQGTNGNGSIGCVSGNLVGDCAWGSPDIPEQHQSPTNVSFNMKPPNLKTD
GPNNTKPEPMSPVNSWRGNLSQSPTEPASEDGTAFWGSGDAKKGESKDSGWDSAGVSSWG
QGGASSGGGWGDWGKQPSTEGTGWDVNDGPSQEHMSSWGPDTPASEGSRDSSEGHPRSRE
RSSSDDLAPLLPRQDLDPRVLCNTGWGQTPVRQHTVWEMEESPDKKNGAGTEVWGSSSNT
PSTGPAPPPSGCASPNLSASPRMETSKSEGPCRAMPNAGWGGSVPASAQPNSGWGEPPAN
KKVPNGSVCGWGDHIAEGPNTNGCNGQSWPEEKSPKWDDGTSQKKTQGWGDGSKTSLGWG
STGSGNSEEWSDHSEMRKNGSGSSSWEPDNRNWKETQRGWGKAAPAQGGSWGDAQHSNGS
AKGWGGKLQESTCGNGEAGGIGSWGGPNSVKQSNPGWASGGRQDLGDEATGWEDPSPSSI
RRKMEIDDGTSTWGDPSAYSKSVNMWDRNNSLNNPGTSNSNSLTGPNNNSNPHQHHSQGP
TQNHVSGSNNNGSPNQGESPLNRMPMVNPGWGELPNVQPNKEPTSWGEPASSNTSVDNGT
SAWGQPSRGCGGWGEGGHDSNGPYGRGNAPAGSGSCQECPKSMQDGWGSGGEEIGMNTGQ
WDADDGDMWSSPTSQDSTCNSWGQSKKGPQRGKVSNKQDDVWIMTRLIKQLTDMGFPKDP
AEEALKSNNMNLDQAMSALLEKKSELDKWGMGMSDYSNGMNKSIVCRPTNLSKDTSLDRA
PFLDKDGRLSDDASSSPFMPSPGLKVPLANSSLTNHGLGGISSGLSMQNLNNRQMQNGMF
GTNGAAQTRVMQQQAPPPQPPVPPLSSAQPTLRAQVPQLLNPQVQAQLLQFAAKNIGLNP
ALLTSPINPQQMTLMYQLQQLQVAYQRLQIQQQMMQAQRNVSGPIKQQEQQVARTITNMQ
QQIQQHQRQLAQALLMKQQQPPPSSHTGLHPNLGKASLDTFTGHPQTSGLSVSDLQTKEQ
QSSPNSFSPYTLSGLNSNMNVNCMEVGSLSLKDPPQPQSRLSQWTHSNSIDSLSASAQHM
EANLNKHGSVSSAQSHVPIGKSTMEDSFSPYNLMSRSESPTSTMVSPDSWTQGKRPNEKI
SNNSSINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIQDVNRYLLRDRTG
GKLLEMKSTWSPGPISHTQASLSHELWKVSPGTRNSSAPSRPPPGLTNTKPSSTWGGNSL
GLSQGWTSSYSSEGGTWSADSPNRGSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNL
TQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEDDVNRFFAQGQSFTPTTSWQA
SQAPCSNQPRLGNPAVSHPTGLWSGGGGGRGTKTVCSTGNNSSGNGGNLLWGGVPQYSSL
WAPPNGDDARVIGSPIPINTLLPGDLLSGESM
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagcaagaagagacaaacaaggatactgcacagaaaccggcaact
gaacagaaaaccaaagtgccagactctgttaaacccaatcccagcatcccttcaaacccc
attctgaccctgaacctgcctgtaccctgtcctgcctccaccagcaatggcaagcgtagc
ccttgtaattccctacaacagcagttacctccattacagcagcccagtccccgatatgtg
cccagagagattcctccacgcttccgacagcaggagcagaggcagctactgaagaggggt
caacctttacctacaggcgctctgaacccgacctctgcttgccctcagtccggggtcatc
tcccctcccgagacgcccaccagcaaacggcacacgggacttccccatcaaagtggacag
ggagaccagcatgagaattgtctttggagcattccagtcagcaaaagcaacagcagcaac
cgggataaagtgattattaactgtaacaaaaccgacacttggccttccaatacatacggc
aagagccaccatacaccagaatgcaccttggacgctgaatgtacatcagaggttgtcagc
aacagtagcagcactattatggctacaggagctagccagcagggtcattacccaatcagc
aaagccagcatcaatctatcttctagtatggtctctagtcaaagtagccctaccaggggc
tgggtcttagagggaaataatgacttgtctttgggcagtagagggcagtccaaatggggt
gcctctaatctgaacttaaatcccagtgccaaccctgctgcttggccagctcttggacat
gaggggcctggggtagggtcaggcccaagtagcatggtttgctcaaatccactttcgctt
agtatgtgtggccaaggaggagtgccaccacctcaaggcactaatggaaatggtagcatt
ggttgtgtcagtggaaaccttgtaggggactgtgcatggggcagccccgatatcccagaa
cagcatcagtcacccacaaatgtatctttcaacatgaaacctcctaaccttaaaactgat
ggaccaaataacactaaaccagagccaatgagtccagtgaacagctggagaggaaatctc
agtcagtcacctactgagcctgccagtgaagatggaactgccttctggggcagcggagat
gccaaaaagggagaatcaaaggactcaggctgggattctgcaggcgtctcctcttggggg
caaggaggagctagcagtggtggcggctggggtgactggggcaaacaaccaagcactgaa
ggtacaggatgggatgttaatgatggtccttcccaggaacatatgagttcctggggccct
gatactccagcaagtgagggcagcagggatagtagtgagggccacccaagaagtagagag
aggtcctcaagtgatgatttggcccctttgctcccgaggcaggacttggacccacgtgtc
ctttgtaacacaggctggggacagactccagttcgccaacacactgtttgggaaatggaa
gaaagtccagacaaaaagaatggtgcagggacagaggtctgggggtcttcctccaacaca
ccttcaactggacctgcaccacctccttctggatgtgccagtcccaacctcagtgcgtct
cctagaatggagacaagcaagagtgagggaccttgcagagctatgccaaatgcaggctgg
ggaggatcagtcccagcctctgctcagcctaacagtggatggggggaaccacctgcaaat
aaaaaggttcccaatggatcagtatgtggctggggtgatcatattgctgaaggccccaat
accaatggctgtaatggccagtcttggcctgaagaaaagtcccctaaatgggatgatggt
acttctcagaagaaaacacaaggttggggtgatggaagcaaaacttccttaggctgggga
agtaccggcagtgggaatagtgaagagtggagtgaccattcagaaatgcggaagaatggc
tctggaagttcttcttgggaacctgacaacagaaactggaaagaaacccagagaggatgg
ggtaaagcagcaccagcacagggtggtagttggggtgatgctcaacattccaatggttca
gccaaaggttggggtggaaaacttcaggaatccacatgtggcaacggtgaagctggaggc
atagggtcatggggtggcccaaattctgtgaaacagagcaaccctggctgggcatcagga
ggccgacaggatctgggagatgaggccacaggctgggaagatccctctccttcttctatt
cgtcgcaaaatggaaattgatgatgggacctccacctggggtgaccccagtgcttacagt
aagagtgtaaacatgtgggacaggaataactccctaaataatccgggaaccagcaacagt
aatagcctcactgggccaaacaacaatagcaatcctcaccaacaccacagccaaggtcct
actcagaaccatgtcagtggtagcaacaacaatggctcaccaaatcaaggtgaatctcct
ctcaacagaatgcccatggtgaaccctggctggggagagctccctaatgtacagccaaac
aaagaacccacttcatggggtgagccagccagttctaacacttctgtggacaatggaact
tcagcttggggccagccctctaggggctgtgggggatggggtgaaggtggccatgactcc
aatggaccttatggcagaggaaatgcacctgctggatcaggctcctgtcaggaatgtccc
aaatctatgcaagatggctggggatcaggaggggaagagattggcatgaacactggccag
tgggatgctgatgatggtgacatgtggagcagtcctacgtcccaagactccacttgtaac
tcctggggtcagtccaagaagggcccacaaaggggcaaggtctccaacaagcaggatgat
gtttggattatgaccagacttatcaagcagcttacagatatgggttttccaaaggatcct
gcagaagaagccctaaagagcaacaatatgaatctggatcaggccatgagcgctttgtta
gagaagaaaagtgaactggacaaatgggggatgggcatgtcagactacagtaatggaatg
aataaatcaatagtgtgccgacccacaaacctctccaaagacacctcactggatcgtgcc
cccttcttggacaaggatggaaggctgtcagatgatgcttcatcctcaccgtttatgcct
tctcctggcctcaaggtcccactggccaatagcagcctcactaaccatggattgggtgga
atctcctctggcctgtccatgcaaaacttgaataacagacagatgcagaatggaatgttt
ggcactaacggagcagcacaaactcgggtcatgcagcagcaggccccgccccctcagcca
ccagtgccacctctaagctccgcccagcctactctacgtgctcaagtgcctcagcttctc
aaccctcaggttcaagcacagctcttacagtttgcagcaaaaaacattggactgaatcct
gcacttttaacctcaccaataaatcctcaacaaatgaccctgatgtaccaactacaacaa
ctgcaggtggcgtatcagcgtttgcagattcagcagcaaatgatgcaggcacagcgtaat
gtctctggtcccatcaaacaacaagagcagcaagttgcacgtacaatcacaaacatgcag
cagcagatccagcagcaccagcgtcagctggcccaggccctgcttatgaaacagcagcag
cctccaccttcctctcacactggcctgcacccaaaccttggtaaggccagcctggacact
ttcacgggtcaccctcagacttcaggcctctccgtctcagacctgcagaccaaagagcag
cagtcttctccaaactccttcagcccttatacactctctggtttgaactcgaacatgaat
gtaaactgtatggaggtgggaagtctatctcttaaagacccccctcagcctcaatcccgg
ctctcacagtggactcattcaaactccatagattccctgtcagctagcgctcagcacatg
gaggcaaacctcaacaagcatggttcagtctcttctgctcagtcccatgtgcctatcgga
aagagcaccatggaagattccttcagcccatacaatctgatgtcaagatctgaatccccc
accagcaccatggtgtctccagacagctggacacagggcaaacgtcccaatgagaaaatc
tctaataactccagtatcaactggcctcctgaattctgccctggggtgccatggaaaggt
ctgcagaacattgaccctgagaatgaccccaacatgaccccaggaagcgttccaagtggc
cccaccattaacactaacatacaggatgtgaatcgctacctgttacgtgacagaactgga
ggtaaactcttggaaatgaagtccacctggtcccctggacccatctcccacacacaggcc
tctttatctcatgagctatggaaggtttccccagggacacgtaactccagtgctccctca
cgcccccctccaggcctgaccaacaccaagccctcctccacctggggaggaaactctctt
ggtctcagccagggctggaccagctcttactcctcagaagggggaacttggagcgctgac
agtcccaacagaggaagcagctggctggtgctgagaaacctcactcctcagattgatggc
tccaccctgcggactctgtgcatgcagcacggccctctcattaccttccatctgaacctg
acgcagggcaatgctgttgtacgttacagctccaaggaggaggctgccaaagctcaaaaa
tccctgcacatgtgtgtgctgggtaacactaccatcctggcagagtttgccggtgaggat
gatgtgaaccgcttctttgcacagggccagtccttcacccccaccaccagctggcaggcc
agccaagcaccatgctccaatcaaccccggctgggcaaccctgctgtcagccaccccaca
ggcctctggagcgggggtggaggaggtagaggtaccaagacagtctgtagtactgggaac
aacagcagcggaaatggaggcaacctgctgtggggcggtgtgccgcagtactccagtttg
tgggctcccccaaatggagacgatgccagggtaatcggcagccccatcccaattaacact
ctgctcccgggagacctgctgagtggagagagcatgtag
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integrated database retrieval system
