Cyprinus carpio (common carp): 109092851
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Entry
109092851 CDS
T05134
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109092851 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109092851 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109092851 (shha)
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C46: hedgehog family
109092851 (shha)
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Morphogens
109092851 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
Hom_end_hint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
109092851
NCBI-ProteinID:
XP_042583984
UniProt:
A0A9Q9WIF1
LinkDB
All DBs
Position
B7:24027975..24037440
Genome browser
AA seq
418 aa
AA seq
DB search
MRLMTRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVALKDGRQKAVKDLNPGDKVLAADGDGKLVYSDFIM
FTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHSMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLAFAPV
RLYYDVSSALFPKNFISQSNATLQLEGVHWYSKLLYQMGTWLLDSRMLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatgacgagagtgctgctggtgtctcttctcagtctgtccttggtggtgtcc
ggactggcctgcggtcctggcagaggctacggcagaagaagacatcccaagaagctgaca
cctctcgcctacaagcagtttatacctaatgtcgcggagaagaccttaggggccagcggc
agatacgagggcaagatcacgcgcaattcggagagatttaaagaacttactccaaattac
aatcccgatattatctttaaggatgaggagaacactggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtgacagagggctgggatgaggatggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgtgacaagagcaaatacgggaca
ctctctcggttagctgtggaagctggatttgactgggtctattatgagtccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgcggcgaaatctggaggctgcttccca
ggttcggctctggtcgcgctcaaagacgggagacagaaagccgtgaaggacctgaaccca
ggtgacaaggtgctggcggcggacggcgatgggaagctcgtgtacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgcgtgttttacgtgatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcacctcctttttgtcctcgacaactcaacggat
gatctgcactccatgaccgccgcgtttgccagcagtgtcagagccggacaaaaggtgatg
gttgttgatgatagcggccagcttaaatctgtcatcgtggaacggatatacacggaggag
caccagggctcattcgcaccagtgactgctcatggaaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccacagtctggcgcatttggccttcgcgcccgtc
aggctctattatgacgtgtcatcggccctattccctaaaaacttcatcagtcagtccaat
gcgactttacaactggagggagtccactggtactccaagcttctgtatcaaatgggaacg
tggcttttggacagccgcatgcttcatcctttggggatgtcagtaaactcaagctga
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